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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000069_pilon:1299089..1305375+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10137.2.p1 ID=MSTRG.10137.2.p1|Name=MSTRG.10137.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6287bp|location=Sequence derived from alignment at sc0000069_pilon:1299089..1305375+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAAACACGATGAGAAAACCAACGACGATAACACACTGTAAGTTCTAGCT
CAAATTGCGACAAAGAAAAAGGAGAGGACGAAAGAAGAACCTCGAGAAGA
ATATGTTGAAAAAATAAGTAGCAAACTTACGTATCTATAATTTTGATAGT
ACTGGCAACGAGTCTATCACGACAATCCTCAAGTCAAAGTCAAAAACTGC
AGATAGACAAATTGTTCTGgaatgaaaatcttgaaaaaaagaagCATTTG
GTAAAAAATGTCAGCTTTCCTCAACAAAGATTCAGGTAAAATAAaagatc
aaaagaaaatttgcaTGCTTCTAAACGAGGGGTAAACCACTaaaagtaaa
agtttccgtacactacacattttcaaaaagtcaaaaatgtcaaaataaaa
gtcaaagagttaaataaaacagtcaaaaaagtcaaaaagtcaaaaatgat
CGTACACTTCTTTTTCAAGTAGTTTACTTTTCGATTTTAAAGATTGTAAA
TTTAAAGTATCCATGACTTATTAATTTAGTATGTAATTGCATCGAGTGGA
TGtgaaattttaatctttttaaactGTTTTCGTTAGGAGAAGTGGGGCGT
Acagtatttcggaattgcggaaattgacccttttttcttcggaatttcgg
aaatcaggcaaaattccttcggtatttcggaatggTGAAATAGTTTCGGT
ATCGAAAATCCATGAACTTTTGTTtcggaatttcggtattataaagtttt
atccccctttttcggaattcatacatgaaaaatcaaatttgatgaagaat
tagtcaaaacgaggaaaaatacccaaaaaatcggtatcggaattgcaagt
atctTTTTACGGAATCtcagaaatttttgcaaaaaacatTCGGTATttcg
aaaattgcaaaaatcccgtacgccccccccccccccccaccggagAAGTA
TTAAAATGATAGCCGAGAAATgaggtttagggggggggggcgtacggttt
ttcggtattgcggaaatcgacccttttttcttcggaaattcggaaatcag
gcaaaattccttcgatacttcggaattttgaaattgtttcggtatcggaa
atccatgaattttagcttcgaaatttcggtattgtaaagtttttatccct
ttttttcggaattttgggaaatttgatgaaaaattagtcaaaaagaggaa
aaatgcccaaaaaattggtatcggaattgcaagtatttttttacagaatt
tcggaaattttggcaaaattattcggtatttcggaaatcgcgaaccccgt
acgcccccctgtTTAGATGGGGCTTGATGAAGTTGGCCAAAAAGATTTGG
TTAAAAGCGAAGACTTTAGAAAAGTATCAGAAAACCGtaataatttgatt
taattAATAATTATTTAATATAGAGTTAGAAAAGTTATGCTAATCCATCA
TTTATGAGATTAAAACAGAaagcaaaataacaaaaaaattttataagaat
aaactatataagaaccaTTAAGGCTTttgggactctaaaacacccgattt
cttaagaaaacatatagacaaaaatacccacaaaatggtgaaaatgagaa
catgttaagaacacttttaggcttaaatctcaaaaagttatcaaaattcg
aaggcttcaaaattttttgatgttcttataaaaaaacgagtATTCGTGAA
TTTAGATTGTCAGTGCTAATACGTCTATGCTAAAAGCAAGGAAAAGAACA
AAGTTGAATCGAAAGACGACAAGAAAACGTCGAGATAAATCCAGCTGTAT
TATTTAGTATCTTTTGTTCTTCTTATTAGGAGAGACAAAACAAAGGATTG
CAAACAAAGGAATGGAAAAGGGGAAACAGGAGAGTGAAAATAGTGAAGAA
AGGGACACATCTCAAAAATACATCTGCTTTTGGCgagaaaattttctctc
ttGTTTCTCTTCTTTCGCACGCCAACTTTTCACAGTTATTGTTTTCCCTC
TGAATTTTATTCTTCGTATTTCTCACTCTAGAAAGATCTTTTCGtttaaa
aattcagtttttccaattttatcaaatatttcatCTAAATTATAATATTG
ATGAATCTTCTCTTGGTTGTAAAATTAGTCTTACATATTCCCCAAAATAC
TAAAATTGGCagtcactttttttttgacatcatATCAAAAACCATGTAGC
CGTTTTAGGGCCTTTTAGCCCCCCACTACATCAAATAATGGGGAAGCCAT
TAATGAACTCCCATGACTCATAAAAATGGCTTTATTCTTCTCaacattta
aaagtttttctgtcAATCTTAATTTTACTGATACCGCAAACTATCATGGC
GATTAAATACAGCAGGGATTAGACGGTTTTGTTTGCTCGAACCACTATTA
TTATATCTCCATTTCAATAAAACATTTTAGAAGCTTTAACTTTAAGGTTT
TATTAATGAACTTAGAAATAAAGAATGAAGAAGCCCAACTTAGATTCCAG
ACCTCTACGCAATTTTATTGTTGGAGCCTGATTTATAGGGGCTGGAAACG
AGTTTTGGTTTTAATGAACAAAATGAAGAATGgtaaaattagaaaaacta
CTCCCCTTTTATCATAATTGGAGTAGAAAATCGCTTTCGTCACCGAAAAT
ATATTTCACTGTTTGAAGGAAAAATATATAGAATTATGGGAATaaggaaa
acaaagaaatatttagCCCCCTGCATATTCAGTCTTTTTAATAATACTTT
ACAATATATTAAGTGCTCGACAGGGGGTagttaaatgaaatttttgtgtG
CTTATAAGCTCAGCTAGTTTtcaatttgggaaaaaaattttcgactaGTA
GATGAAAAATAAGAGAACATTTCTTCGTTTCTTTTGTTGTgataataaaa
atgaagaaaaataaaaaataatattggagaagggagaaaaatagaagaag
aacgaagaaaaaataaagattcataaaattataaagaagaactttaaaag
taagtctgaaataagaaatttttgtagGCTTGAGCCTTTAATCTTTTTGG
GTAAATTATAGGgtctaaaaaaactttaagcAGCATATATAAATTTAATG
TATGTAAATTCAcggataaattattttggtcTTTGATCGATTAATTTGTT
TAAGGGGTTAATCAAGTTTTATACAATCAGAAGATTAAAcgattgaaata
ttttgagaaaaagggcGAAGTATAATCAAAGTTTGAAGGCACATATATCA
CAACTGTAGTAGTTTCTTACTTTCTTGAGTCCAAAGCTTTTTGGATTTCT
AAAATCTTGAGAAATACAGGTATTTAGACAAATAAATAATAGGACAGAGC
AGAACAGATAAGTTGAAAAGAAATACGACTGTTCTAAATTCGAAAATGGA
AAAGGTTATCACACGTTACaacgttgttttttattttcaggatcGGTTTG
TAACCTTGACATCAACAATTACTGGTCATTAAGAAGACAAAAGAAACACA
AGACCCATCTTCTGATTGAAGAAGATCTTCATACAAAACCTATGTCACGT
GAACACACCAACCTCTTACGAGAAGCAACCGAGAAACGACGAAACATGTC
GGTCAaatgtcgttctttttgtcggaCATCATGCTGTCGCTTAAAGCCGG
AAACCAATTTAGCATTGATGTTATGTTTGGTATTTTATTTGTACATTTGT
CTGGGTGGAGCATTGTTTTTGCTGTTGGAAGGACAAGCAGAAACACCAGA
TGGTACAAACATCCATAAAGATCGTATGCAAGGATTAATGGTACGTTATT
TGAAGGTTTCTAGCATTAGTTTTACaggtttttgataaaatcaacaaTTC
AAGGACATGAAGATTGGCTAAAACACCTTATAGGAAATTAGTCTCGACAA
TCTATGATTTGAAAAAGATCGTGGAAGCAGAAAATGACGTTTACATcgta
ttttccaaagaaaaattttgtaaagatAAATACATTCAAACACTTATGGA
CCAATCAAATATGCTTCTTGAGTCTCCATAAGAGTTTGTATCAGAcaacc
catcaaaaaaccatccatctccaaccaaacattgtccaaagaccaaccaa
aaTGTTCCAATGTTTTCTACTTCTTATTTTAGGACAATTTAAAGATAGTA
TTGGATCGAGACAACACGAAACAGATTACACATTATTGTGAGCAATCCAC
TGGTTTCCAGATGAGGAAAAAACCAGCACATGAGAATCTATGGTCATTCT
TAGAGTCGACTGATTTTGCATACCAAGTGGTGACTGGACAAGGAACAAGT
AAGTCCATGCAAAAGATTTATCCAAAAATAATCTTGCACTTGCCATGAAT
ATTGTTTAATTATAATTCAGTAATGTAATAACGAATCAGTTTATTGAACG
ATTCTCACTGGTACAGTGATAAAGGATGTTTTCTATCGTAAAAGTGTAAT
AGATGGGCAAGCATCTATTCATTGGAATCAATATCGAAGCCACATGCAAT
AGATTGGGCGTATGAACGTAATTCATTAAGTCAACTTTATTCATCTCGTA
GTTGAACGACCATTACTTTCGTTCTTCTTACAGAGTTAACAAAGAATTCA
TTCaatattttactttcttttctATTTCAGTTCAATCTACAAGAACCATT
TTCACAACTGGTGGCAAGATCTCATACatcattttccttttccttgGAAT
ACCTCTCACAGTATTGACCTTCAGAGCTACTGGGCAACGTTTAAACATCA
TGGTTTATGCTTTCATTCGGTTTATTAACGTCAAAGTATTCAGTAGGCAA
CTAACAGCCAATGTCCACATAAAAGCCTTGATCTtaaacattttcatctt
cataatCACTATTCTGATTGGGGCGAGCATGTATTGTGTCACACAAGGGT
GGAGTTATCTGGACTCACTCTTCTACACTATGAGCGTTTCATTTACCGTT
AGTAACAGCCAAGAAAATATAGTCAACCAAAACATTGCAATGAATTCGAA
TAAGGATAAGGCGTACCGAATCCTATTCAATTTTTATACTTTTGTGGCTT
ATACAGTCTTGGCTTCGTTGACGTGGAGTGCACATCATTTTACAAGACAT
ATGAGATTTAAAGCACAGAATCGCCAGTTAAAGAATGGAGACGTACATTC
GACTTGTCCATGGGTTGAAGTGACACGAAGTAAAACAGCTTCACCGAGCA
AAAGCACCAGAGAAAGAGAGACTGATCGAGAATCTGTTTGTTAACGTTAT
GATTGATGAAAAAGTGAATAAATGAGTGAACGAATTGAAAACTACAATTA
TCATCATTCTGTTAACCTTGGAGTGTGCAATGAGGTAAGAAGTAGCATAC
TCTTTAGAGAGAAAATCAGTCCTTTCATCTCACATGCAGAGTAGCAGATT
ACACAAGAAAAATCACGtcagagaaattttgaaataaagatcAAGGTAAG
AAAACATCGATACTGTTGATATTAAGAAGAATGGACAGATTTCAATGCAC
CCTTGGTTAGCAGCAAGTACCAATTGAGATGTTTCAGGAACACATAAAAT
GAACAATCCAAGCCAAAAACACAGTATGGACTACATTTCTTCAcctaaaa
atagagaaaattttgaaaggttAACTACTCGTCACGTGTgtcaagttaaa
aaaatttgaaataattctccACTATTTGATTGATGATCGATTGACGAAAA
TATAATGCCGAAATGTTGTCCAGAGAGGAAAGAGGAAAGATTTTGATTGA
CTAATTCTTGCCGAAAATATGTTCtttgtttataagaattaaCTGAATAC
GTATTCGTTCTCGTTTTAGTAACGAAATAACTGTCCGATAATTAGAGTAG
ATTTATCCACAGCATCGGAATCCCTAATTGACGAGATTATAATTCAGTCA
ATTCTTCACAATCGTTTAATTTCAAGTGCAAATaatattgtttgattttt
ccaaaaataattcgAAAATAATGATGTGTAAATAGATGTCttccttttgt
tttctttttctaaaaaaatgtcataaaataatttaatagaGAATATTTAC
ACTTTTCTGTTCGTTTTTAATTTATATacaatgattttaaaattttgtct
gGACATAAATATATATAGATTTATTTCTTACTTTTAATCTACGTATAAAT
CTCTTTAAAATTGTCAGATCGATGAACTAGAAAAAGGTCGCTTAGCCCGG
ACATGGCAACAAGTAACAGGGACAAGAAAATGAGGTCTGGGACGGAATAA
TGGTTATGGTTGTAGTTGAGTGATGGTGCTATGAATA Coding sequence (CDS) from alignment at sc0000069_pilon:1299089..1305375+ >MSTRG.10137.2.p1 ID=MSTRG.10137.2.p1|Name=MSTRG.10137.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4632bp|location=Sequence derived from alignment at sc0000069_pilon:1299089..1305375+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGCTTTCCTCAACAAAGATTCAGgatcGGTTTGTAACCTTGACAT
CAACAATTACTGGTCATTAAGAAGACAAAAGAAACACAAGACCCATCTTC
TGATTGAAGAAGATCTTCATACAAAACCTATGTCACGTGAACACACCAAC
CTCTTACGAGAAGCAACCGAGAAACGACGAAACATGTCGGTCAaatgtcg
ttctttttgtcggaCATCATGCTGTCGCTTAAAGCCGGAAACCAATTTAG
CATTGATGTTATGTTTGGTATTTTATTTGTACATTTGTCTGGGTGGAGCA
TTGTTTTTGCTGTTGGAAGGACAAGCAGAAACACCAGATGGTACAAACAT
CCATAAAGATCGTATGCAAGGATTAATGGACAATTTAAAGATAGTATTGG
ATCGAGACAACACGAAACAGATTACACATTATTGTGAGCAATCCACTGGT
TTCCAGATGAGGAAAAAACCAGCACATGAGAATCTATGGTCATTCTTAGA
GTCGACTGATTTTGCATACCAAGTGGTGACTGGACAAGGAACAATTCAAT
CTACAAGAACCATTTTCACAACTGGTGGCAAGATCTCATACatcattttc
cttttccttgGAATACCTCTCACAGTATTGACCTTCAGAGCTACTGGGCA
ACGTTTAAACATCATGGTTTATGCTTTCATTCGGTTTATTAACGTCAAAG
TATTCAGTAGGCAACTAACAGCCAATGTCCACATAAAAGCCTTGATCTta
aacattttcatcttcataatCACTATTCTGATTGGGGCGAGCATGTATTG
TGTCACACAAGGGTGGAGTTATCTGGACTCACTCTTCTACACTATGAGCG
TTTCATTTACCGTTAGTAACAGCCAAGAAAATATAGTCAACCAAAACATT
GCAATGAATTCGAATAAGGATAAGGCGTACCGAATCCTATTCAATTTTTA
TACTTTTGTGGCTTATACAGTCTTGGCTTCGTTGACGTGGAGTGCACATC
ATTTTACAAGACATATGAGATTTAAAGCACAGAATCGCCAGTTAAAGAAT
GGAGACGTACATTCGACTTGTCCATGGGTTGAAGTGACACGAAGTAAAAC
AGCTTCACCGAGCAAAAGCACCAGAGAAAGAGAGACTGATCGAGAATCTG
TTTGTTAAATGTCAGCTTTCCTCAACAAAGATTCAGgatcGGTTTGTAAC
CTTGACATCAACAATTACTGGTCATTAAGAAGACAAAAGAAACACAAGAC
CCATCTTCTGATTGAAGAAGATCTTCATACAAAACCTATGTCACGTGAAC
ACACCAACCTCTTACGAGAAGCAACCGAGAAACGACGAAACATGTCGGTC
AaatgtcgttctttttgtcggaCATCATGCTGTCGCTTAAAGCCGGAAAC
CAATTTAGCATTGATGTTATGTTTGGTATTTTATTTGTACATTTGTCTGG
GTGGAGCATTGTTTTTGCTGTTGGAAGGACAAGCAGAAACACCAGATGGT
ACAAACATCCATAAAGATCGTATGCAAGGATTAATGGACAATTTAAAGAT
AGTATTGGATCGAGACAACACGAAACAGATTACACATTATTGTGAGCAAT
CCACTGGTTTCCAGATGAGGAAAAAACCAGCACATGAGAATCTATGGTCA
TTCTTAGAGTCGACTGATTTTGCATACCAAGTGGTGACTGGACAAGGAAC
AATTCAATCTACAAGAACCATTTTCACAACTGGTGGCAAGATCTCATACa
tcattttccttttccttgGAATACCTCTCACAGTATTGACCTTCAGAGCT
ACTGGGCAACGTTTAAACATCATGGTTTATGCTTTCATTCGGTTTATTAA
CGTCAAAGTATTCAGTAGGCAACTAACAGCCAATGTCCACATAAAAGCCT
TGATCTtaaacattttcatcttcataatCACTATTCTGATTGGGGCGAGC
ATGTATTGTGTCACACAAGGGTGGAGTTATCTGGACTCACTCTTCTACAC
TATGAGCGTTTCATTTACCGTTAGTAACAGCCAAGAAAATATAGTCAACC
AAAACATTGCAATGAATTCGAATAAGGATAAGGCGTACCGAATCCTATTC
AATTTTTATACTTTTGTGGCTTATACAGTCTTGGCTTCGTTGACGTGGAG
TGCACATCATTTTACAAGACATATGAGATTTAAAGCACAGAATCGCCAGT
TAAAGAATGGAGACGTACATTCGACTTGTCCATGGGTTGAAGTGACACGA
AGTAAAACAGCTTCACCGAGCAAAAGCACCAGAGAAAGAGAGACTGATCG
AGAATCTGTTTGTTAAATGTCAGCTTTCCTCAACAAAGATTCAGgatcGG
TTTGTAACCTTGACATCAACAATTACTGGTCATTAAGAAGACAAAAGAAA
CACAAGACCCATCTTCTGATTGAAGAAGATCTTCATACAAAACCTATGTC
ACGTGAACACACCAACCTCTTACGAGAAGCAACCGAGAAACGACGAAACA
TGTCGGTCAaatgtcgttctttttgtcggaCATCATGCTGTCGCTTAAAG
CCGGAAACCAATTTAGCATTGATGTTATGTTTGGTATTTTATTTGTACAT
TTGTCTGGGTGGAGCATTGTTTTTGCTGTTGGAAGGACAAGCAGAAACAC
CAGATGGTACAAACATCCATAAAGATCGTATGCAAGGATTAATGGACAAT
TTAAAGATAGTATTGGATCGAGACAACACGAAACAGATTACACATTATTG
TGAGCAATCCACTGGTTTCCAGATGAGGAAAAAACCAGCACATGAGAATC
TATGGTCATTCTTAGAGTCGACTGATTTTGCATACCAAGTGGTGACTGGA
CAAGGAACAATTCAATCTACAAGAACCATTTTCACAACTGGTGGCAAGAT
CTCATACatcattttccttttccttgGAATACCTCTCACAGTATTGACCT
TCAGAGCTACTGGGCAACGTTTAAACATCATGGTTTATGCTTTCATTCGG
TTTATTAACGTCAAAGTATTCAGTAGGCAACTAACAGCCAATGTCCACAT
AAAAGCCTTGATCTtaaacattttcatcttcataatCACTATTCTGATTG
GGGCGAGCATGTATTGTGTCACACAAGGGTGGAGTTATCTGGACTCACTC
TTCTACACTATGAGCGTTTCATTTACCGTTAGTAACAGCCAAGAAAATAT
AGTCAACCAAAACATTGCAATGAATTCGAATAAGGATAAGGCGTACCGAA
TCCTATTCAATTTTTATACTTTTGTGGCTTATACAGTCTTGGCTTCGTTG
ACGTGGAGTGCACATCATTTTACAAGACATATGAGATTTAAAGCACAGAA
TCGCCAGTTAAAGAATGGAGACGTACATTCGACTTGTCCATGGGTTGAAG
TGACACGAAGTAAAACAGCTTCACCGAGCAAAAGCACCAGAGAAAGAGAG
ACTGATCGAGAATCTGTTTGTTAAATGTCAGCTTTCCTCAACAAAGATTC
AGgatcGGTTTGTAACCTTGACATCAACAATTACTGGTCATTAAGAAGAC
AAAAGAAACACAAGACCCATCTTCTGATTGAAGAAGATCTTCATACAAAA
CCTATGTCACGTGAACACACCAACCTCTTACGAGAAGCAACCGAGAAACG
ACGAAACATGTCGGTCAaatgtcgttctttttgtcggaCATCATGCTGTC
GCTTAAAGCCGGAAACCAATTTAGCATTGATGTTATGTTTGGTATTTTAT
TTGTACATTTGTCTGGGTGGAGCATTGTTTTTGCTGTTGGAAGGACAAGC
AGAAACACCAGATGGTACAAACATCCATAAAGATCGTATGCAAGGATTAA
TGGACAATTTAAAGATAGTATTGGATCGAGACAACACGAAACAGATTACA
CATTATTGTGAGCAATCCACTGGTTTCCAGATGAGGAAAAAACCAGCACA
TGAGAATCTATGGTCATTCTTAGAGTCGACTGATTTTGCATACCAAGTGG
TGACTGGACAAGGAACAATTCAATCTACAAGAACCATTTTCACAACTGGT
GGCAAGATCTCATACatcattttccttttccttgGAATACCTCTCACAGT
ATTGACCTTCAGAGCTACTGGGCAACGTTTAAACATCATGGTTTATGCTT
TCATTCGGTTTATTAACGTCAAAGTATTCAGTAGGCAACTAACAGCCAAT
GTCCACATAAAAGCCTTGATCTtaaacattttcatcttcataatCACTAT
TCTGATTGGGGCGAGCATGTATTGTGTCACACAAGGGTGGAGTTATCTGG
ACTCACTCTTCTACACTATGAGCGTTTCATTTACCGTTAGTAACAGCCAA
GAAAATATAGTCAACCAAAACATTGCAATGAATTCGAATAAGGATAAGGC
GTACCGAATCCTATTCAATTTTTATACTTTTGTGGCTTATACAGTCTTGG
CTTCGTTGACGTGGAGTGCACATCATTTTACAAGACATATGAGATTTAAA
GCACAGAATCGCCAGTTAAAGAATGGAGACGTACATTCGACTTGTCCATG
GGTTGAAGTGACACGAAGTAAAACAGCTTCACCGAGCAAAAGCACCAGAG
AAAGAGAGACTGATCGAGAATCTGTTTGTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000069_pilon | genome | sc0000069_pilon:1299089..1305375 + |
|
