MSTRG.10121.2.p1 (mRNA) -

Overview
NameMSTRG.10121.2.p1
Unique NameMSTRG.10121.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000069_pilon:1035888..1038226-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10121.2.p1 ID=MSTRG.10121.2.p1|Name=MSTRG.10121.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2339bp|location=Sequence derived from alignment at sc0000069_pilon:1035888..1038226- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGTCAGAGAGGAATAAATACTTTTTCAATCAGTGATACTGACCTTTCT TGTTGGAATGTGTTTTGTCAGGAATCTTAAAAATCTGATTCTTTTATTTA AGTGAATTATAAAAATATGCTCCAATAAAGCAATTATGAAGCTACATCAC TTAACCATCACATGTAATGATGCTCTAAAAGCAAAGATTAAGTTCACTTC ACTGTATTCATTCAAAGCATATGGGTACTTGGTAGTCAACAAAAGTAAGG ATATAATTGAAGTCTTGAGGCATGGAGACATTTTTATTTTGTTAAAGCAA TCCTCAGAGCAAATTGCAGACACTGTTGATGATGTTGCTTTTGTTGTTGA AGATTTGGAAACAATCTGTCAAAATACTTTAAATAACGGAAGCATTGTAG TCCAGTCACCAAGAACTGAATCATGTCAAACCTATTCTGGAGTGTGTAAA CCATGTAAGAATTGTAAAAGTAATTTAACACCATGTTTGCACATCATCAG TAAAGCCATTGTGAAATCACCAATTGGAAATTTACAACATACCATTTTAA ACAAAACAAATTTTCATGGAGATTTTCTGCCTGGTTTTGTCTCATATGAA GAAAGCCTTGTTGACCAGGAGAAGAATAACGAAATGTTTGATTGTATTGA CCATGTTGCGTTAGCTGTGCCTTGTGGTGAAACAATGAAACACATCATGT GGTATAAAGAATGCTTGCAATTATTTAATTTTTATTGTAACAGACTAGAA AAAGATGATAGCCTTGTAATTCGTTCCAAGATGGGTCAAGGAATAAGACT GTATACCTTAGTAGCTCATCCCTGCTCAGAGGCTGGCTTGATTACAGAAG AACATGAAATTGGAAACGAAAGATTCAAATTTGTATTTTGTGAATCATTA GAATTAGAAGGTAAGTATTCTCTTCTGAATTTATTAAAGGAAAGATACTT TTCAGGGGAAAGGAATAGCAGAGCATAGCGTGACACTGTCTTTTGGTTTG TGAACGTCAAGAACAACTTATGTTTATTCGAAACAGCAGTGATTCCATCT GAAATAAAAATTTTACTTACACAGCTTTTAATATAATTATATTACCATTC TTTAGGAAAGGATCAGATTAATAGCTTTCTAAAGAAACACAATGGACCTG GTGTTCAGCATGTAGCCTTCAAATCATCTGCCATCGTGCAAGACACAAAA ATCTGGCATCAGAACGGAGTCAAATTTTTATCACCACCAATAGAGTACTA CAACATAGTAATTCTTCGTTTGAATTGTTATTTTTCATTTTGTTTTCTTT GATTTGTTCTGTTTTTCCAAAAGGGCTATTTTATCGTCAAAATCGATTTT ACTATTTTAAATAATGTATTAATAATATCTAAATTTTCAGATTGACACTA CCTTGAATAAACTAGAGACACGTCAGAGTGGCCTCTCAAGCTCAGTTCAA GACCTTGGAATTCTTATCGATGTAGAGAAGATAAGTAACACTGACGGCGA CAAAGAAGAAGAAGGGTTTGGATTTGCTTGTTTTTCTCATCATTCTCTAA ATTGCCTTGATTTTGAAAACTTTTTTAAATTTTAGTGCGTTTACACAGCG ATTGGTACTACTTGTTTTTATAACTCATAAAAATATGTACATTATCCAAA AATTTCTTTCTTTTTTACATTTTCAGGTTTTTATACCAAGTGTTCACTTC ACCAATATTACCATCAGAGACATTCTTTTTTGAACTCATTCAACGTGAAA ACAGTCATGGTTTTGGTGCTGGTAATGTAGCTGCTTTATGGAATGCTGTT GAAATGAGTAATATGAAGGGAATAAGATAGAAGCATACGAAATGATTTTG AATTTGTGAAAAACTTACAAAGTGAACTTCGTCATAATTTGTTTGATTTC TTGGACTTTGCAAACTGGATATTGTTTTGTTATCATTTGTAATATATCTA TCTTCGGACTACTTCTTTCATTAAAGGTTTTGTTTTTAAATAAGAGTGAT ATCAATTTTAATTTACAAGCTTTTTGGACCTACCTGGAGGTCCTATAAAT TAACCTTTGTTCGTCCGTCCGTCCGTCCGTCTGTCCGTCCGTCCGTCTGT TACCAGCTTTTCTCGAGATTGGCTCATTAGTTTTTTTTGATTTTTGGCAC AAAGATGCAAAATGGCAATGCCCAAAATGTGACGGAGCCCGATTTTCGAA AAAAAAAATTTTCCGGCTTAAATTGCCGGAAATATGCCGGAAAAACCGGT TTTTTGATATTTTCTCGAGATTTCATCATTAGTTTTCTCAGATTTTTTGC TAAAAGATGCGTATTAACAATGCTCAAAACATGACCGGG

Coding sequence (CDS) from alignment at sc0000069_pilon:1035888..1038226-

>MSTRG.10121.2.p1 ID=MSTRG.10121.2.p1|Name=MSTRG.10121.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4824bp|location=Sequence derived from alignment at sc0000069_pilon:1035888..1038226- (Clytia hemisphaerica_ch_hm2_pilon)
GTTTTTATACCAAGTGTTCACTTCACCAATATTACCATCAGAGACATTCT
TTTTTGAACTCATTCAACGTGAAAACAGTCATGGTTTTGGTGCTGGTAAT
GTAGCTGCTTTATGGAATGCTGTTGAAATGAGTAATATGAAGGGAATAAG
ATAGATTGACACTACCTTGAATAAACTAGAGACACGTCAGAGTGGCCTCT
CAAGCTCAGTTCAAGACCTTGGAATTCTTATCGATGTAGAGAAGATAAGT
AACACTGACGGCGACAAAGAAGAAGAAGGGAAAGGATCAGATTAATAGCT
TTCTAAAGAAACACAATGGACCTGGTGTTCAGCATGTAGCCTTCAAATCA
TCTGCCATCGTGCAAGACACAAAAATCTGGCATCAGAACGGAGTCAAATT
TTTATCACCACCAATAGAGTACTACAACATAATGAAGCTACATCACTTAA
CCATCACATGTAATGATGCTCTAAAAGCAAAGATTAAGTTCACTTCACTG
TATTCATTCAAAGCATATGGGTACTTGGTAGTCAACAAAAGTAAGGATAT
AATTGAAGTCTTGAGGCATGGAGACATTTTTATTTTGTTAAAGCAATCCT
CAGAGCAAATTGCAGACACTGTTGATGATGTTGCTTTTGTTGTTGAAGAT
TTGGAAACAATCTGTCAAAATACTTTAAATAACGGAAGCATTGTAGTCCA
GTCACCAAGAACTGAATCATGTCAAACCTATTCTGGAGTGTGTAAACCAT
GTAAGAATTGTAAAAGTAATTTAACACCATGTTTGCACATCATCAGTAAA
GCCATTGTGAAATCACCAATTGGAAATTTACAACATACCATTTTAAACAA
AACAAATTTTCATGGAGATTTTCTGCCTGGTTTTGTCTCATATGAAGAAA
GCCTTGTTGACCAGGAGAAGAATAACGAAATGTTTGATTGTATTGACCAT
GTTGCGTTAGCTGTGCCTTGTGGTGAAACAATGAAACACATCATGTGGTA
TAAAGAATGCTTGCAATTATTTAATTTTTATTGTAACAGACTAGAAAAAG
ATGATAGCCTTGTAATTCGTTCCAAGATGGGTCAAGGAATAAGACTGTAT
ACCTTAGTAGCTCATCCCTGCTCAGAGGCTGGCTTGATTACAGAAGAACA
TGAAATTGGAAACGAAAGATTCAAATTTGTATTTTGTGAATCATTAGAAT
TAGAAGGTTTTTATACCAAGTGTTCACTTCACCAATATTACCATCAGAGA
CATTCTTTTTTGAACTCATTCAACGTGAAAACAGTCATGGTTTTGGTGCT
GGTAATGTAGCTGCTTTATGGAATGCTGTTGAAATGAGTAATATGAAGGG
AATAAGATAGATTGACACTACCTTGAATAAACTAGAGACACGTCAGAGTG
GCCTCTCAAGCTCAGTTCAAGACCTTGGAATTCTTATCGATGTAGAGAAG
ATAAGTAACACTGACGGCGACAAAGAAGAAGAAGGGAAAGGATCAGATTA
ATAGCTTTCTAAAGAAACACAATGGACCTGGTGTTCAGCATGTAGCCTTC
AAATCATCTGCCATCGTGCAAGACACAAAAATCTGGCATCAGAACGGAGT
CAAATTTTTATCACCACCAATAGAGTACTACAACATAATGAAGCTACATC
ACTTAACCATCACATGTAATGATGCTCTAAAAGCAAAGATTAAGTTCACT
TCACTGTATTCATTCAAAGCATATGGGTACTTGGTAGTCAACAAAAGTAA
GGATATAATTGAAGTCTTGAGGCATGGAGACATTTTTATTTTGTTAAAGC
AATCCTCAGAGCAAATTGCAGACACTGTTGATGATGTTGCTTTTGTTGTT
GAAGATTTGGAAACAATCTGTCAAAATACTTTAAATAACGGAAGCATTGT
AGTCCAGTCACCAAGAACTGAATCATGTCAAACCTATTCTGGAGTGTGTA
AACCATGTAAGAATTGTAAAAGTAATTTAACACCATGTTTGCACATCATC
AGTAAAGCCATTGTGAAATCACCAATTGGAAATTTACAACATACCATTTT
AAACAAAACAAATTTTCATGGAGATTTTCTGCCTGGTTTTGTCTCATATG
AAGAAAGCCTTGTTGACCAGGAGAAGAATAACGAAATGTTTGATTGTATT
GACCATGTTGCGTTAGCTGTGCCTTGTGGTGAAACAATGAAACACATCAT
GTGGTATAAAGAATGCTTGCAATTATTTAATTTTTATTGTAACAGACTAG
AAAAAGATGATAGCCTTGTAATTCGTTCCAAGATGGGTCAAGGAATAAGA
CTGTATACCTTAGTAGCTCATCCCTGCTCAGAGGCTGGCTTGATTACAGA
AGAACATGAAATTGGAAACGAAAGATTCAAATTTGTATTTTGTGAATCAT
TAGAATTAGAAGGTTTTTATACCAAGTGTTCACTTCACCAATATTACCAT
CAGAGACATTCTTTTTTGAACTCATTCAACGTGAAAACAGTCATGGTTTT
GGTGCTGGTAATGTAGCTGCTTTATGGAATGCTGTTGAAATGAGTAATAT
GAAGGGAATAAGATAGATTGACACTACCTTGAATAAACTAGAGACACGTC
AGAGTGGCCTCTCAAGCTCAGTTCAAGACCTTGGAATTCTTATCGATGTA
GAGAAGATAAGTAACACTGACGGCGACAAAGAAGAAGAAGGGAAAGGATC
AGATTAATAGCTTTCTAAAGAAACACAATGGACCTGGTGTTCAGCATGTA
GCCTTCAAATCATCTGCCATCGTGCAAGACACAAAAATCTGGCATCAGAA
CGGAGTCAAATTTTTATCACCACCAATAGAGTACTACAACATAATGAAGC
TACATCACTTAACCATCACATGTAATGATGCTCTAAAAGCAAAGATTAAG
TTCACTTCACTGTATTCATTCAAAGCATATGGGTACTTGGTAGTCAACAA
AAGTAAGGATATAATTGAAGTCTTGAGGCATGGAGACATTTTTATTTTGT
TAAAGCAATCCTCAGAGCAAATTGCAGACACTGTTGATGATGTTGCTTTT
GTTGTTGAAGATTTGGAAACAATCTGTCAAAATACTTTAAATAACGGAAG
CATTGTAGTCCAGTCACCAAGAACTGAATCATGTCAAACCTATTCTGGAG
TGTGTAAACCATGTAAGAATTGTAAAAGTAATTTAACACCATGTTTGCAC
ATCATCAGTAAAGCCATTGTGAAATCACCAATTGGAAATTTACAACATAC
CATTTTAAACAAAACAAATTTTCATGGAGATTTTCTGCCTGGTTTTGTCT
CATATGAAGAAAGCCTTGTTGACCAGGAGAAGAATAACGAAATGTTTGAT
TGTATTGACCATGTTGCGTTAGCTGTGCCTTGTGGTGAAACAATGAAACA
CATCATGTGGTATAAAGAATGCTTGCAATTATTTAATTTTTATTGTAACA
GACTAGAAAAAGATGATAGCCTTGTAATTCGTTCCAAGATGGGTCAAGGA
ATAAGACTGTATACCTTAGTAGCTCATCCCTGCTCAGAGGCTGGCTTGAT
TACAGAAGAACATGAAATTGGAAACGAAAGATTCAAATTTGTATTTTGTG
AATCATTAGAATTAGAAGGTTTTTATACCAAGTGTTCACTTCACCAATAT
TACCATCAGAGACATTCTTTTTTGAACTCATTCAACGTGAAAACAGTCAT
GGTTTTGGTGCTGGTAATGTAGCTGCTTTATGGAATGCTGTTGAAATGAG
TAATATGAAGGGAATAAGATAGATTGACACTACCTTGAATAAACTAGAGA
CACGTCAGAGTGGCCTCTCAAGCTCAGTTCAAGACCTTGGAATTCTTATC
GATGTAGAGAAGATAAGTAACACTGACGGCGACAAAGAAGAAGAAGGGAA
AGGATCAGATTAATAGCTTTCTAAAGAAACACAATGGACCTGGTGTTCAG
CATGTAGCCTTCAAATCATCTGCCATCGTGCAAGACACAAAAATCTGGCA
TCAGAACGGAGTCAAATTTTTATCACCACCAATAGAGTACTACAACATAA
TGAAGCTACATCACTTAACCATCACATGTAATGATGCTCTAAAAGCAAAG
ATTAAGTTCACTTCACTGTATTCATTCAAAGCATATGGGTACTTGGTAGT
CAACAAAAGTAAGGATATAATTGAAGTCTTGAGGCATGGAGACATTTTTA
TTTTGTTAAAGCAATCCTCAGAGCAAATTGCAGACACTGTTGATGATGTT
GCTTTTGTTGTTGAAGATTTGGAAACAATCTGTCAAAATACTTTAAATAA
CGGAAGCATTGTAGTCCAGTCACCAAGAACTGAATCATGTCAAACCTATT
CTGGAGTGTGTAAACCATGTAAGAATTGTAAAAGTAATTTAACACCATGT
TTGCACATCATCAGTAAAGCCATTGTGAAATCACCAATTGGAAATTTACA
ACATACCATTTTAAACAAAACAAATTTTCATGGAGATTTTCTGCCTGGTT
TTGTCTCATATGAAGAAAGCCTTGTTGACCAGGAGAAGAATAACGAAATG
TTTGATTGTATTGACCATGTTGCGTTAGCTGTGCCTTGTGGTGAAACAAT
GAAACACATCATGTGGTATAAAGAATGCTTGCAATTATTTAATTTTTATT
GTAACAGACTAGAAAAAGATGATAGCCTTGTAATTCGTTCCAAGATGGGT
CAAGGAATAAGACTGTATACCTTAGTAGCTCATCCCTGCTCAGAGGCTGG
CTTGATTACAGAAGAACATGAAATTGGAAACGAAAGATTCAAATTTGTAT
TTTGTGAATCATTAGAATTAGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10121MSTRG.10121Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10121.2.p1MSTRG.10121.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10121.2.p1.exon4MSTRG.10121.2.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10121.2.p1.exon3MSTRG.10121.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10121.2.p1.exon2MSTRG.10121.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10121.2.p1.exon1MSTRG.10121.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000069_pilongenomesc0000069_pilon:1035888..1038226 -