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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000069_pilon:133785..139294+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10058.2.p1 ID=MSTRG.10058.2.p1|Name=MSTRG.10058.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5510bp|location=Sequence derived from alignment at sc0000069_pilon:133785..139294+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAGTCCATGATACGTGATATCATTTGAATGTTGGTTTGGATGATGTTTT
CAAATCATAATTGTTTAACTTGAAAGATTTTACTTCCTCCTAGATTGATC
GTTTTACTGAAACAAGAGGAAATATTGTTTAATGTTCCAGTCATTTTCAT
AGAAAAGACAAGAAAATATGTCTTTTCTATGAAAATGACTGGAACATTAA
ACAATATTTCCTCTTGTTTCAGTAAAACGATCAATCTAGGAGGAAGTAGG
CAACAAGCATAAACTGGCCACTTAAGAACAATGACTTTGCAAATGAAGAA
CACAAGAGCTTTGTGCGTCTGTTTTTTCGTTTCGTTCAACATATTGGGAA
GCATAAACGGTAACTTTATCATTGAGAGAAAAATTGGGGACTCGGATGAG
ATTATATTACTGGACAAAAACAAGGATCCGTTAGATATTTTGGCAGGTGG
CACTTTTATGGATCACCGCACGTGTAGGGCTGATACTAACAAGGGCAATA
TTCGAAGGAACATTGGTTTATCATCACAAGACCCTGGCAGAAAGATTAGT
TGCTATACTGAAGGTGAATTACAATCAGGTAAGACTTAAAAATATAGTTt
gagaaaatgaaatgaaagtagAGGTTAGTAGAACTCCTTTAATGTATCAA
ATTAGTTATTAAAGGTCACGAAAAAACTCTAGCCTGAGTAAAGTGTATTC
TAGCGGTATGGACTGTTGTAGCCTGGTCACTATAAGGTAAACAATGTAAG
TGATATGCATTTCCTTGAATCGTATAAACTATCGTTTTGTACGTGACCCC
TTTTAAAATCGATCAAGTGACTTAATGGTTATAGGAGTGACTTGATTTCT
TAATAAGATTCCCATGATGGTTGTGGTATACCGAGAATCCTTAGCTTTTT
AAGTCAACTGAAGCATAAAACACCAACATACAGTTTATGccctaggcttc
tgctcatacTCCGACGAAAAAGTTCCTTatagcatgaacatataaacgac
tggacatccatctcctttgtctttttgtagaaaaggctgctagcttcgtt
gccgcctcgttaaaatcataaaatgaaacaatagattttgatgatatacc
acttgggagtaccttgctaacaacgtcaaaactttgacaaaagtctctgt
tgttctactcttctcaagtcttttatctatatcataacaaagataacaga
ggcaaaatcatcgtcagcttgtcaaaactccgactaAattttctaaattt
tgacttaaaagtgtctaataattttaaaaagtgtcgcattctaatttcga
tattcttatgacacaggctctaaacttggcaagctattttttcaagtcat
aaaaaaaattattgaagtgacaaaagggattcaaaagtatacacgcagtt
gaaattctgcattttagagttgaaaatgttgatagaatatattacaaact
tgtgaaaaaatttgaaaataatttttttgtacattaggagtaatgttcaa
gctctatcaatccttttacctaaataattcaaagaaataaaattatgacg
gaatattgtcggatttttcataccaattttgaaatacaggcggcaacgaa
gctcgcttcaaagagacaataaaagatagatgtccagtcgtttatatgtt
catgcttataggaagtatatctatagcgGTCTGCGAATCAAGCTACTTTA
ACCCATATTCAATAAATCTTCAGAATGTGGAAGCACTAATGGGAACGAAT
TCAGAACCATTCCCAAACAAACTACTCAAATCCCTACGAGATGTTCAAGC
GCTGGAtgggaaaatataaaaatatgggGTTTCAAAGAGCGTGATAGACT
CGGTTGGCAAGAATTAAGTAATGGAGAGAAAAGAAACGTTAGATTGTCCA
GCAGAGCGTTAGTAAGTATCATGAATGAGTTTGATTACTTTGATTTTACG
CTTAAACTTTCTGAAATTATCACCAGTCTGGAATCATTCTATTTTCTCTA
GGCAAGCATTCATTTCAGCGACTGTAGTACAAAGATAGAGCCTTCGGCTA
TGGTATGccaggtcgtgggttcaatacCAGGCCAGGTCATATCAAAAATT
TCGTACTTGgtacaaaatggtacttgatgcctctctgctttgTACTATAC
AAtcaaagagaaggatcaagagCGAGTGGAGCATTTGACGAAGAAAAAGT
AGCATTTTTTCCTACCTTCGGGGAAAATTCGAGAATAATAAGGTTTATAT
AGccattcaaaaaagaaattatttggtAAAAACGCCTTATAATACCTCTt
tacagaattttgaaaatcgaagaaaattggatGGACTTTTAGGAGTTATC
ACGTACACATGCCCAAATGGAAATGTTTACTGTGATGTTCTCAAGTTTGC
TGGAGCGGCTAAATGTAAGTGTGAAAACTTTTCTTCAATGTCATATATTG
GGAAAATGCTTTTTAAAGCTCAGgtttaatcaaaatttattgttttcgaC
TCAATAAAGttgtatttcaaaaatcaccatgTATTTTAAAATACAACTTT
ATTGAATTCGCTCTACGAAGAGTATTGAGCACTCTTTTAATGGTTGTTTT
CGACTCAACAAACAACAAGCTCaaaaaaaTGGCATGACATATTGGGAATT
AACACCACGGTCACCTACTAATTTGAAGTCTATTAATTCTCTTAGTATAG
CGTCTACCAACAAGCAAGGTGCTACAGTTGAgtctctctataactcgaac
ccgcaAGGAAAAATTACTTGTCCAAGCTAAGGAAACATTCGATTTATAGA
GAGTCGAGTTAAAGAGATTAGTGtaattcaatttcttttaaaatgttcta
tAGATCCTCTACCATACGCAAATTCAATAGACGACCTGATAAAAAATCTC
AAGCAAATCGATGATGGATATCCAATAGGAGCAACACCACCCACACCAGG
GAGAAACACAAGATCACCAGTAACAAAAGATGACGAATCTTCAAATAACA
GTGGTCTCATTATTGGTGTCGTATTTGGTGTCTTTGTTGTCATCTTTGCA
ATGGTTCTGGCATTCTTCTTGTATAGGAGGTaaaaaaaTCTTACACAGTC
AAATACAAACACTTGCAATGTCACAAAAGTTGCCAAAAGGCGTACTGATT
CCCCATTTCTCGAAGCTGAGAATAAACTGGAGCCAAACCCTTACAATCCT
TACTTTCAGCAAAAGgttgacccttagagagacattCGATTTAGAAGATG
AAAAACCAGACCCTTTAAGCACGCACATGACCAGCACCAATTTGTGCCTA
AGTATCCCCCTTCGGGggttattagcgagtttatgtatttgcatttttga
ggacgcggtaaagtgactgaagcgatctgaaaaaacccgcagttctgacc
agcaaaatcgaggacggtaaaagtgctgatttaccgtcgtcctcacttag
tcaggatctagtcaagtTAGAACCTTatcgtctccgtcgcagaaaaacac
acatgcataaactcggtattaaaGTGGTGCCTTTCATGCATGAATCAcag
tattattttctttttcttcaagacGTAAAAGAAGCCGCCGAGCCAAGAAA
CAAACGCTCTCACCCGTATACGCAAAATGTGAAGTCGACATAAACTCCAC
ACAcggagaagaagaagaaagcaaACTCATACACCAGTACTCCGACTCCA
ATGCATACGCTTTACCGTCAAACCCACAACCTGAGTACCGTGAAATCGAA
CCTGAAATTCGCTATTCACCTAGAAATAATCATATTTCCATGGAGACTCC
GAAACAAAACAACAGCCATTATGTGTCAGCTACTTCTACACAAACCAATA
GCAACCAAGAGGGACCTGAAGATGAGTACCAGACCCCTAATATAGTGCCT
TCACCACAGAATGGAATCACATCTGAGAGAAGTATAACAAAAGACAATAT
TAACGATGAAGCACTAGATTATAGCGTTCCTAATAAAACTGGAAAGTCAG
AATCTAAAAACAATACTAAAAATGATACGCCTTACAAAGAGCGTTCTGTA
GGATATAGCGTTCCTGATAAAGCTGGAGACTCGGAACGGAAAGGCTATAC
TGAAAACGTGAAAGAACCTTCGCCAGAGTATAGTGTTCCAGGATCAGCGG
TAGATCATGTAGACGGTGGAGCTACCGATGATGAAACAGCGCCTTTAAAG
GGATATAGTGAGCCGGGACAAATAATAGATAATGgtaataatgataatga
taatggtGATGACGATGACGAAGTTAATTATTACAGTACACCAGCAACCA
ATGAAACGGATGCATTGGTGAGACCGAATTCAGCGTTGTACGCTAAAGTG
AATAAAAATACGAAGAGATAGAGGACTGAGAAAGTTAAGCTTAAATATCA
AAGTATGtaaattttaaagctttgcattggcttcaaaaggaaattttgaa
gaaatttaaaaTACCTTCTTCTCGTAGAGCATTTAATGACatttgttaac
cggttactacTTCAAAGcaggctacacggctttttgcgcaatgcaattgg
ttcttttcgcatgacgacgggcctacactgcccagagttgcccgtTGTTA
GGAAAATTCGTTGACATCAGTGCGTTGACATCAtgtctctcattttttat
ttctgacgtcagaaattataacaatttttaatctcttttcgcttgtattt
ttcactttagttcgctatttttcctggataaagcgctaaaaatagtattt
tctaaaaatttcttgaaattttcccTTCGAAGCCAACGCAAACTTTTATC
TTACATCATTTTGTATACATATAATACACTAATACgaaaataagaaatct
tacgaaaatacttttcgacaaaaaatgaacaaagaaaagcaagaaaaacc
ACATAAgatttaattcaattttactACTACTATATTGAGTTTAAAATCGC
ACATAACCTCCTGCTCTCTTAGAATCGCTTTTAAGTAACTTACAACAGTA
TCCCGGGGGAGGAGGGACTTAGGCAAACTTCGGTACGTGGACGTGTCACT
GGTCAGAGTTCCTTTTTTAGGctttgaagatatctgacagggttccAGAT
TGATTTCCAAAATATGTATCTGACAGGGGCGACTAttgggaatttttgaa
aatttatagggtggaaattagaaattttttcaatttttcgtctactttta
atcattttggccacttttcagggtgaaaacgggaaaatttatacattttt
cttATTGACAGGGTCCCAGACTTACCaaatattcatatctgacagggtcc
atttttcaaactccagcggtaCGTCCCCGTTGGCTGTCAAGATCAGTGCA
TCCCCCCGGAACAATAGCCTAAAACTAGACTTGCCAGGCTCTGCAATACG
AAAAGGTTAATTTAAAGAATGCTTGCTCTGATTCTTGATCTAGTCGATAA
CTATATAACCAATATAATTTTAAAAGGTAATATCTGTAGATAAtgtagaa
ttttcaaaaa Coding sequence (CDS) from alignment at sc0000069_pilon:133785..139294+ >MSTRG.10058.2.p1 ID=MSTRG.10058.2.p1|Name=MSTRG.10058.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1656bp|location=Sequence derived from alignment at sc0000069_pilon:133785..139294+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCTGGCATTCTTCTTGTATAGGAGacGTAAAAGAAGCCGCCGAGC
CAAGAAACAAACGCTCTCACCCGTATACGCAAAATGTGAAGTCGACATAA
ACTCCACACAcggagaagaagaagaaagcaaACTCATACACCAGTACTCC
GACTCCAATGCATACGCTTTACCGTCAAACCCACAACCTGAGTACCGTGA
AATCGAACCTGAAATTCGCTATTCACCTAGAAATAATCATATTTCCATGG
AGACTCCGAAACAAAACAACAGCCATTATGTGTCAGCTACTTCTACACAA
ACCAATAGCAACCAAGAGGGACCTGAAGATGAGTACCAGACCCCTAATAT
AGTGCCTTCACCACAGAATGGAATCACATCTGAGAGAAGTATAACAAAAG
ACAATATTAACGATGAAGCACTAGATTATAGCGTTCCTAATAAAACTGGA
AAGTCAGAATCTAAAAACAATACTAAAAATGATACGCCTTACAAAGAGCG
TTCTGTAGGATATAGCGTTCCTGATAAAGCTGGAGACTCGGAACGGAAAG
GCTATACTGAAAACGTGAAAGAACCTTCGCCAGAGTATAGTGTTCCAGGA
TCAGCGGTAGATCATGTAGACGGTGGAGCTACCGATGATGAAACAGCGCC
TTTAAAGGGATATAGTGAGCCGGGACAAATAATAGATAATGgtaataatg
ataatgataatggtGATGACGATGACGAAGTTAATTATTACAGTACACCA
GCAACCAATGAAACGGATGCATTGGTGAGACCGAATTCAGCGTTGTACGC
TAAAGTGAATAAAAATACGAAGAGATAGATGGTTCTGGCATTCTTCTTGT
ATAGGAGacGTAAAAGAAGCCGCCGAGCCAAGAAACAAACGCTCTCACCC
GTATACGCAAAATGTGAAGTCGACATAAACTCCACACAcggagaagaaga
agaaagcaaACTCATACACCAGTACTCCGACTCCAATGCATACGCTTTAC
CGTCAAACCCACAACCTGAGTACCGTGAAATCGAACCTGAAATTCGCTAT
TCACCTAGAAATAATCATATTTCCATGGAGACTCCGAAACAAAACAACAG
CCATTATGTGTCAGCTACTTCTACACAAACCAATAGCAACCAAGAGGGAC
CTGAAGATGAGTACCAGACCCCTAATATAGTGCCTTCACCACAGAATGGA
ATCACATCTGAGAGAAGTATAACAAAAGACAATATTAACGATGAAGCACT
AGATTATAGCGTTCCTAATAAAACTGGAAAGTCAGAATCTAAAAACAATA
CTAAAAATGATACGCCTTACAAAGAGCGTTCTGTAGGATATAGCGTTCCT
GATAAAGCTGGAGACTCGGAACGGAAAGGCTATACTGAAAACGTGAAAGA
ACCTTCGCCAGAGTATAGTGTTCCAGGATCAGCGGTAGATCATGTAGACG
GTGGAGCTACCGATGATGAAACAGCGCCTTTAAAGGGATATAGTGAGCCG
GGACAAATAATAGATAATGgtaataatgataatgataatggtGATGACGA
TGACGAAGTTAATTATTACAGTACACCAGCAACCAATGAAACGGATGCAT
TGGTGAGACCGAATTCAGCGTTGTACGCTAAAGTGAATAAAAATACGAAG
AGATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000069_pilon | genome | sc0000069_pilon:133785..139294 + |
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