MSTRG.10054.4.p1 (mRNA) -

Overview
NameMSTRG.10054.4.p1
Unique NameMSTRG.10054.4.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000069_pilon:104181..105983+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10054.4.p1 ID=MSTRG.10054.4.p1|Name=MSTRG.10054.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1803bp|location=Sequence derived from alignment at sc0000069_pilon:104181..105983+ (Clytia hemisphaerica_ch_hm2_pilon)
AAACCGAGTAGCTAATCAGCAATAAAATGAAGGTTTCTCCTGACATGGCA TTGTTAACATATCTCGCATTCCTGCTACCGTTTGCCAAATGTGGCAGCCA TTACTTTTTCACAGATAACTTCGCTGTTGCCAGCTGGATTAAAACAGACG GCGTCATATTTAAAGGTAaaataatcttttattttttcactggAACATTT GACAATACAGTGTCAAAAGAATCACCTGGCGTTACGAGATTGTGTAAATC CGAGCGCCACGGACACTCTTTgggaaatcttgaaattttccCAACTTTGA GTTTCCACAAGTGCTATGTCATTACCCGTAGCGTACTAGCGGCCCTCCAA GCTATGGCTCACAAGGAGTGGCTCagtttcccatcggagaggaataaTAG CCGGTATTTGATATAGCGCATTCTGAAAACATTTTCGTTGGACGCGAAAA TCCCCGAAAACGAAGGCTAAGGTTTAGGCCTCTCGCACGCGGTCTGGCGA AATTGCGttatctaaaccttccagatgttgaaaatattCTCAACCCTCAC AACTTTAACGTGTCAGAAGAAAATTACATCGTGTGCCGTTACAGGCATCA TGAAAAttgcatgttttaatttttttttaaaccaatagGAAGCAGACTAT TGACAGGAGGTGGTATGATGGAGAACGTCGAAGACTGCCGATGGTTATGT TTAAAGAACACCGCCTGCAATTCCTTCAACATCTTACCAGTTGAtgacat ttcaatattttgtgaACTGACAGAATATTTTTATGACGACACCGACCAGC AGAAGGAAGCAAAGATTGGAGCATACAATTTCAGTCTGGCTGTAAGTTCA ACATTAAGCGAAATCTATAATTCAGCACAATTGTATTCATGTAATAGTCT CGACCAAAaccttttacacgttttttttataagaacatccaaaagttttg aagcctttgcttatttttaccattttgtgaatattttttaccgATTCCCT aagaaaaagggtgtttttgagttcacaaagccttatgttcttatatatag tttgttcttaaaaaaaacgtgtatttgttcACTATGAAATAAAAGCTACA TCAGTTTGCAGTTGTACCAGATGGACAGGGCTTTTTCCGAACAAAGGTGA TAAAAAGTCGTGGTTGGCTAGGATATTGATAACAGACAACTCTCATTCGA CCTTCAAGCGTACAAAAATTATCTCTAAAGAATTTCAGAGAACATGAATG CATGAGACCACACATGTTTTAATCTGATATTACGATggtggattggcggc cgcccacgctgaAGCTTGCTATAAGCGCGGGTCAATTTCCCACTGGAGAG AAAATGaagaatgatagtcggcctttgatgtgccacaTCCCTAGTTGGGC TTGGATTCAGGCCTCTCACTGCAAAATCCATGACGCGATTTGGCAAAATT CCGTAATTTAAACCTTCCAGACGTTGGAAGTTTCCCCGCCTTTCAAAGCT TTAACACAccggaagaaaattttacattgAGTGTCAGATAACCAATGTCA TTATATTTTGATATCAAGAATTCCTCTCATCCAaccattatttttctttt gtttttttagggAAGAAGACcatcaaaataaagaagaaaataaaaatgaa aagtgaaaatctaGTCAACTTGGAATTATTATGCCCGCACTTAACTTATA ATCCAAACTTTTAATAAATATCTGCACAAAATGTTTATCTAAAATGTTAA ACCATTTTAAAACTTTGCAAATAGTAGAATTATCATGCACATAAATCGAT GAC

Coding sequence (CDS) from alignment at sc0000069_pilon:104181..105983+

>MSTRG.10054.4.p1 ID=MSTRG.10054.4.p1|Name=MSTRG.10054.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1089bp|location=Sequence derived from alignment at sc0000069_pilon:104181..105983+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGTTTCTCCTGACATGGCATTGTTAACATATCTCGCATTCCTGCT
ACCGTTTGCCAAATGTGGCAGCCATTACTTTTTCACAGATAACTTCGCTG
TTGCCAGCTGGATTAAAACAGACGGCGTCATATTTAAAGGAAGCAGACTA
TTGACAGGAGGTGGTATGATGGAGAACGTCGAAGACTGCCGATGGTTATG
TTTAAAGAACACCGCCTGCAATTCCTTCAACATCTTACCAGTTGAtgaca
tttcaatattttgtgaACTGACAGAATATTTTTATGACGACACCGACCAG
CAGAAGGAAGCAAAGATTGGAGCATACAATTTCAGTCTGGCTggAAGAAG
ACcatcaaaataaATGAAGGTTTCTCCTGACATGGCATTGTTAACATATC
TCGCATTCCTGCTACCGTTTGCCAAATGTGGCAGCCATTACTTTTTCACA
GATAACTTCGCTGTTGCCAGCTGGATTAAAACAGACGGCGTCATATTTAA
AGGAAGCAGACTATTGACAGGAGGTGGTATGATGGAGAACGTCGAAGACT
GCCGATGGTTATGTTTAAAGAACACCGCCTGCAATTCCTTCAACATCTTA
CCAGTTGAtgacatttcaatattttgtgaACTGACAGAATATTTTTATGA
CGACACCGACCAGCAGAAGGAAGCAAAGATTGGAGCATACAATTTCAGTC
TGGCTggAAGAAGACcatcaaaataaATGAAGGTTTCTCCTGACATGGCA
TTGTTAACATATCTCGCATTCCTGCTACCGTTTGCCAAATGTGGCAGCCA
TTACTTTTTCACAGATAACTTCGCTGTTGCCAGCTGGATTAAAACAGACG
GCGTCATATTTAAAGGAAGCAGACTATTGACAGGAGGTGGTATGATGGAG
AACGTCGAAGACTGCCGATGGTTATGTTTAAAGAACACCGCCTGCAATTC
CTTCAACATCTTACCAGTTGAtgacatttcaatattttgtgaACTGACAG
AATATTTTTATGACGACACCGACCAGCAGAAGGAAGCAAAGATTGGAGCA
TACAATTTCAGTCTGGCTggAAGAAGACcatcaaaataa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10054MSTRG.10054Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10054.4.p1MSTRG.10054.4.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10054.4.p1.exon1MSTRG.10054.4.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10054.4.p1.exon2MSTRG.10054.4.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10054.4.p1.exon3MSTRG.10054.4.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000069_pilongenomesc0000069_pilon:104181..105983 +