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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000068_pilon:1034569..1038108- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10011.1.p1 ID=MSTRG.10011.1.p1|Name=MSTRG.10011.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3540bp|location=Sequence derived from alignment at sc0000068_pilon:1034569..1038108- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTCAGAACTAACCAGTAAAAAAAGAATAATAGAAAATAAGAATTATGG
ATTCATATTTGGACATACCACGTGTGGCTTGGGAAGCTGATCACGAATGG
CATGCACGAAGATCCTTTCTAGAATCCAATCAAGAGTTCTTCAGTGGTGA
TAAACTAGCATCTTTGTCAATGGCATGGAGTAATTGGATATTCATGGGAT
GTAACTATGGCGAACAAGTACAAGGTATATGAGAATTTCTTGATTTTTTA
ATTTTGAAAGATGCCATTTTTGCAGGAGACTTTCCGGATTTGGAGCTCTC
TGACATTTTGGTGTGTTGAAAGCGATTACTATGTATTACAAGGCATTTTC
CAGGGTGATTTTCCAAGGTTTTTCTTGGTAATCGGCTTCTAAGTAGGGGG
TGGGAAAATCACCTAGTTAAGAGGTGATGGTAGGGTTAGTACCCTTTATG
GCTATAAGTATGCCGCGGCCATAATATACCCCCAGGCTTATACCAGAGAG
GAATTTGTTTCTGTAAGAACATCAATAAAATAAATTTCTGACGTCTGACG
TCAATCATCACACTGGTACACTGGTACCCAGCCTCTTTGCGCTTTAAGGA
TGTTGATAATAATAGGTGTATGTAGAAAATTTAATATTTCGTTTTTCGGG
GACTGATTTTGTGGATGATTGATTTCTGGAAACCAGTGAAATTCCTGAAA
AATTTGAAATTTGGTGAGGAATTTTACTTTAATTTAGTGAGTCAGCATTT
TTTAAATTTCGGGGACAACGAATAACTAAAGGTATATTATTGCAATTTCT
GTCTTTTCATAGCAACATTAGAAGATTGTCATGCTAGACTGCCACCAGAA
GTGGATGAGAACATCAAAAAGCTTTTAGATGCTGCCACACCCAAAGTGAA
ATTTGTCAAAGCGTCTGGTAGTGGTGAAGATCTAGGCACACGAACGGGTC
CCCCGCAAGGTAAAAAGAAGTAAGAACTCTATTGTTCTATTCTTTTACTA
TCCATATCTCACAAGCCTGCAATTTAAAAAAAAAATTAGACCCGAATACT
CACAAAGTGATGAAAATAAGAACACTTTATGACTTAGTTTTGACTTAAAT
CCCAGAAAAGCTAAGAACAACTTAAGGTCTACGTTCTTATGAAAATGAAA
CAGAGAAAAACGTGTATTTCAACGAAAGAACCCCTTTTTTATAATCTTAA
ATTTGCTTAATATAGAAATCTAGATGATGAAAGCAATTTTAACGAAGCTA
TACCAAATCACTGTCGTTTTACGGGATGGATATCTCTAATTTTCTTTTCG
ATTTTCTCAAACGTATTTTGATAGTTATTGTGTCTGACGTATCTTTGATC
TATCTATGGACTTTAAATAGCATTTTTAACGCTAACTAGGGTGATGTTTA
ATGTTTTTTCCCAATATTTTAAAAAACTTCTTAGGTTTGCTTAGGTGCTC
TCCCCGATTAGTTTTTATTTATTGTCTACGTTTCTATATTTTCAAGGTGG
TAAAAGAAAACTAAACACACCCCAAGAACATTATTCAAAATATTTCAAAA
AAGACACAACAGAATCAGAAAACACAACAACAACAACAACAACCAATATA
GACGTGAACCATCCAAACCATATCCGAGGATTAAAGATTTATTTACCATC
AAAAGAAATGGAGAATCAAATAGCTGGGGAATCTGGAAATTACATATTGA
GTACGATCGGTGCTGTAAACGAAAGTTGTCAAAAATGCAAGAAAATAAAT
GAATACGTCGAAGAAATGACGTTAGATAAGTATAAGTGTACGTTATACGT
AGACGGGCGTATGATAGCGCAATCTTACGGGGAAAACAAGAAAGATACTA
AAAGACTCTGTGCTGAAAAGGGACTTGATTATTTGAAGAAATACCAGGAG
ATTGTTTACAAAGATCGAATCAACCATGATAAAGTAACTGAAATTGACAA
GGGGAATTTAGTTAAGGAATCTTATGAAAATGCACCCAAGATTGCTGATG
ATAACTTAGGTAGTAAATTGTTAAAGAAAATGGGCTGGGACGGGAGTAGC
GGTGTTGGTAAGTACTCGCACGGCATTAGTGAACCCGTTTTTGTTGAATC
CGTTGAAAATCGGGTTGGTTTCGGACACAGCTATGACGATCGGACTGTCC
GAAAAAGTTCAGTGGAAAGCACTTTGTTGGATTTCTTAAGAGACTCCAAA
CAAGAGGAGATTAAGTTTTCAAAGAACTTAACGAAAGAAGATCGTGCCTT
GGTTCATCGGCTTTGTACTAAATATCATCTGAAGCATAAATCGTTTGGTA
AAAATGAGGATCGTTATTTATTAGTCAGTAAACAGTAGTTTTTCTTCTTG
TAATAATACATTATACACGTTTTGTTATAAGAACAAAAGAACATTAGACT
TCGATGTCCAAAATATTATGAACAGTTTAAGACTAAAACATGTTGAACGT
TCTTATAAGAAAACATGTATCCACTTTTTGGACCTACCCCGCCGGTGGGT
GGAGGTCCTTTAAATTAACCGATGTTAGTCCGTTCGTCCGTCCGTTCGTC
TGTTTGTCTGTTGCCAATCTCGGGATTGGCTCATTAGTTTTTTCTGATTT
TTTGCACAGTGATGCAAAATGGTGATTCCCAGAAAGTGACGGAGCTCGAT
TTTCGAAAAGAAAACATTCTGGGCAAATTTGAGCCTAAAAGTGCTTAAAA
TGGGTTTTTTTGGACTTTGTGCGAAATCACTTCATTATAGTTTTTTCTGA
TTTTATTCATAAAGATGGAAGGTTCTCTAAAATACGGCTGAATCAGTTTT
TTTCGGAAATTTTTTTTCGGCCGTATAAATCGGGTTTTCTTGTTTAGGCA
AATTCCCTTTTGCCATATTTAGGGAAAATTAGCATTTCTCGAGATTGGCT
TGGTATTTTTTCTTATTTTTTACCTAGCGATTTAAAATGGTAATATTTAA
TTTCTGATTGAGGCCGATTTTGGAAAAAATGATTTTTTGGATAAATTTGG
ATCTTCACTAGGGAAATCACGCTAAAATATTTATTCACCCCAGTATCTAC
GACTATAAGTCATACGACTTTAACTATACTTCACAGTTCGATTTTAATTT
GAGCTGTGATACCATGAAGGTAATCTATTCAAGCTGCTCGCTACACTTTT
TTACTCTCTTGCTATCTGTCCTATTTTTATCTGATTCTCATCATCAGGTA
GGTCCATTGAGCATTTTGCTTGTTCTACTTATCACTATCTAACTTTCATC
ATCAGGTAGGTTCAGCATCTAGCTTGTTATCCCTAGTTTTATTTTATTTT
CTATTTTCACCTCTGCTATATATAAAGTGTATGTGTGATTTTGTTCGAAA
GTGAGAAAATCGATTAAATATTTGTAGTTGTTAATTGTATTTACTGTGAA
ACTAAAAATTTTTATGCTTTTTCCATTTTTATGTATTTTGCCACCCCTAA
TAAAAGCTTTAAAGCTTGGTATTTAAAAAAAGTGGCGTTTAACTCTATTC
GCGTGCGTTTAACACTAGACGCACGCGTTTAACATTAAAC Coding sequence (CDS) from alignment at sc0000068_pilon:1034569..1038108- >MSTRG.10011.1.p1 ID=MSTRG.10011.1.p1|Name=MSTRG.10011.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3501bp|location=Sequence derived from alignment at sc0000068_pilon:1034569..1038108- (Clytia hemisphaerica_ch_hm2_pilon)
GTGGTAAAAGAAAACTAAACACACCCCAAGAACATTATTCAAAATATTTC
AAAAAAGACACAACAGAATCAGAAAACACAACAACAACAACAACAACCAA
TATAGACGTGAACCATCCAAACCATATCCGAGGATTAAAGATTTATTTAC
CATCAAAAGAAATGGAGAATCAAATAGCTGGGGAATCTGGAAATTACATA
TTGAGTACGATCGGTGCTGTAAACGAAAGTTGTCAAAAATGCAAGAAAAT
AAATGAATACGTCGAAGAAATGACGTTAGATAAGTATAAGTGTACGTTAT
ACGTAGACGGGCGTATGATAGCGCAATCTTACGGGGAAAACAAGAAAGAT
ACTAAAAGACTCTGTGCTGAAAAGGGACTTGATTATTTGAAGAAATACCA
GGAGATTGTTTACAAAGATCGAATCAACCATGATAAAGTAACTGAAATTG
ACAAGGGGAATTTAGTTAAGGAATCTTATGAAAATGCACCCAAGATTGCT
GATGATAACTTAGGTAGTAAATTGTTAAAGAAAATGGGCTGGGACGGGAG
TAGCGGTGTTGGTAAGTACTCGCACGGCATTAGTGAACCCGTTTTTGTTG
AATCCGTTGAAAATCGGGTTGGTTTCGGACACAGCTATGACGATCGGACT
GTCCGAAAAAGTTCAGTGGAAAGCACTTTGTTGGATTTCTTAAGAGACTC
CAAACAAGAGGAGATTAAGTTTTCAAAGAACTTAACGAAAGAAGATCGTG
CCTTGGTTCATCGGCTTTGTACTAAATATCATCTGAAGCATAAATCGTTT
GGTAAAAATGAGGATCGTTATTTATTAGTCAGTAAACAGTAGCAACATTA
GAAGATTGTCATGCTAGACTGCCACCAGAAGTGGATGAGAACATCAAAAA
GCTTTTAGATGCTGCCACACCCAAAGTGAAATTTGTCAAAGCGTCTGGTA
GTGGTGAAGATCTAGGCACACGAACGGGTCCCCCGCAAGATGGATTCATA
TTTGGACATACCACGTGTGGCTTGGGAAGCTGATCACGAATGGCATGCAC
GAAGATCCTTTCTAGAATCCAATCAAGAGTTCTTCAGTGGTGATAAACTA
GCATCTTTGTCAATGGCATGGAGTAATTGGATATTCATGGGATGTAACTA
TGGCGAACAAGTACAAGGTGGTAAAAGAAAACTAAACACACCCCAAGAAC
ATTATTCAAAATATTTCAAAAAAGACACAACAGAATCAGAAAACACAACA
ACAACAACAACAACCAATATAGACGTGAACCATCCAAACCATATCCGAGG
ATTAAAGATTTATTTACCATCAAAAGAAATGGAGAATCAAATAGCTGGGG
AATCTGGAAATTACATATTGAGTACGATCGGTGCTGTAAACGAAAGTTGT
CAAAAATGCAAGAAAATAAATGAATACGTCGAAGAAATGACGTTAGATAA
GTATAAGTGTACGTTATACGTAGACGGGCGTATGATAGCGCAATCTTACG
GGGAAAACAAGAAAGATACTAAAAGACTCTGTGCTGAAAAGGGACTTGAT
TATTTGAAGAAATACCAGGAGATTGTTTACAAAGATCGAATCAACCATGA
TAAAGTAACTGAAATTGACAAGGGGAATTTAGTTAAGGAATCTTATGAAA
ATGCACCCAAGATTGCTGATGATAACTTAGGTAGTAAATTGTTAAAGAAA
ATGGGCTGGGACGGGAGTAGCGGTGTTGGTAAGTACTCGCACGGCATTAG
TGAACCCGTTTTTGTTGAATCCGTTGAAAATCGGGTTGGTTTCGGACACA
GCTATGACGATCGGACTGTCCGAAAAAGTTCAGTGGAAAGCACTTTGTTG
GATTTCTTAAGAGACTCCAAACAAGAGGAGATTAAGTTTTCAAAGAACTT
AACGAAAGAAGATCGTGCCTTGGTTCATCGGCTTTGTACTAAATATCATC
TGAAGCATAAATCGTTTGGTAAAAATGAGGATCGTTATTTATTAGTCAGT
AAACAGTAGCAACATTAGAAGATTGTCATGCTAGACTGCCACCAGAAGTG
GATGAGAACATCAAAAAGCTTTTAGATGCTGCCACACCCAAAGTGAAATT
TGTCAAAGCGTCTGGTAGTGGTGAAGATCTAGGCACACGAACGGGTCCCC
CGCAAGATGGATTCATATTTGGACATACCACGTGTGGCTTGGGAAGCTGA
TCACGAATGGCATGCACGAAGATCCTTTCTAGAATCCAATCAAGAGTTCT
TCAGTGGTGATAAACTAGCATCTTTGTCAATGGCATGGAGTAATTGGATA
TTCATGGGATGTAACTATGGCGAACAAGTACAAGGTGGTAAAAGAAAACT
AAACACACCCCAAGAACATTATTCAAAATATTTCAAAAAAGACACAACAG
AATCAGAAAACACAACAACAACAACAACAACCAATATAGACGTGAACCAT
CCAAACCATATCCGAGGATTAAAGATTTATTTACCATCAAAAGAAATGGA
GAATCAAATAGCTGGGGAATCTGGAAATTACATATTGAGTACGATCGGTG
CTGTAAACGAAAGTTGTCAAAAATGCAAGAAAATAAATGAATACGTCGAA
GAAATGACGTTAGATAAGTATAAGTGTACGTTATACGTAGACGGGCGTAT
GATAGCGCAATCTTACGGGGAAAACAAGAAAGATACTAAAAGACTCTGTG
CTGAAAAGGGACTTGATTATTTGAAGAAATACCAGGAGATTGTTTACAAA
GATCGAATCAACCATGATAAAGTAACTGAAATTGACAAGGGGAATTTAGT
TAAGGAATCTTATGAAAATGCACCCAAGATTGCTGATGATAACTTAGGTA
GTAAATTGTTAAAGAAAATGGGCTGGGACGGGAGTAGCGGTGTTGGTAAG
TACTCGCACGGCATTAGTGAACCCGTTTTTGTTGAATCCGTTGAAAATCG
GGTTGGTTTCGGACACAGCTATGACGATCGGACTGTCCGAAAAAGTTCAG
TGGAAAGCACTTTGTTGGATTTCTTAAGAGACTCCAAACAAGAGGAGATT
AAGTTTTCAAAGAACTTAACGAAAGAAGATCGTGCCTTGGTTCATCGGCT
TTGTACTAAATATCATCTGAAGCATAAATCGTTTGGTAAAAATGAGGATC
GTTATTTATTAGTCAGTAAACAGTAGCAACATTAGAAGATTGTCATGCTA
GACTGCCACCAGAAGTGGATGAGAACATCAAAAAGCTTTTAGATGCTGCC
ACACCCAAAGTGAAATTTGTCAAAGCGTCTGGTAGTGGTGAAGATCTAGG
CACACGAACGGGTCCCCCGCAAGATGGATTCATATTTGGACATACCACGT
GTGGCTTGGGAAGCTGATCACGAATGGCATGCACGAAGATCCTTTCTAGA
ATCCAATCAAGAGTTCTTCAGTGGTGATAAACTAGCATCTTTGTCAATGG
CATGGAGTAATTGGATATTCATGGGATGTAACTATGGCGAACAAGTACAA
G
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000068_pilon | genome | sc0000068_pilon:1034569..1038108 - |
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