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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000068_pilon:980967..983676+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10006.1.p1 ID=MSTRG.10006.1.p1|Name=MSTRG.10006.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2710bp|location=Sequence derived from alignment at sc0000068_pilon:980967..983676+ (Clytia hemisphaerica_ch_hm2_pilon)
AGATAGataatataaaacaaaaacaatggcTTGTTTTATACTACActtat
tgttgttgtttatgTTGAAAATACCACATCGATTTTCTTTGACAACTGGT
AAGTTTTGAACaagattttttattgttatttttcgtGCTAGTAGAATTAT
GCCAGTCTTTAAAAAATGGTTTCCTTTCAACCGGCAACCCTAATCGAAAC
CTGATATCCTGTAAAATTGTTTTcgaataatatatatttttttggtcAGA
ATATTGCAACTAGAGAAGGACTATCACTAGAGGAGCTACATCTAATAAAT
AGTTGACAAACAAAACCCAAGAATATGTTacggggtagaatctaccacgt
tgatgttcttttgtgtataattctgagaaaatatttgaaaggaTTTGAAA
CTTTCAGACTTTTAATGAAATCTGATTGAAAGTACTTGTGCAAATTCTTA
GGGTCATAGATTGTCTAGATCAGGGTTGATGACTTTATTATGATAAACAT
GACATAAAAACCAACATAAATCGCTTAACACTCGAAATTTTAAAATGCTG
ATAAAACTTCTGAAATAATTATCCAATCATATTccaattttgacacgtga
taagTATTGACAGtaagaatttgaaaattaaaaaagaaattgttgaAATA
ATGAAgtcatcaaattttcaaaatattactcatcttcagcaggGATGCTG
GATGCATGGATCTTaaacaaaaaccctcaaagaaaacaaaaaatcggcaa
ttatgttaaagagctgtcttttatctttcagaatctttaaacagaatctt
caaacccagggggggggcactttcGCAAAATTGGGCacgggacgtgccgc
tggtcaggtccctttttaggctctgaaaatatctgacagggtccaaaatt
taccagttttcaagatgtgtatctgaaaTTTTCTGGGTAGAAATtagaag
ttttttcaatttttcgtctacttttattcattttggtcaattttcagggt
aaaaatggaaaatattttgaatttattttctgacagggtcccaaatttac
caaattttCATATCTAACAGGGTCCATTCTTCAAACTCCAGCAGCacttt
tgtgatgacgtcatcaattttggaTGGACTTTatcgatttttcttctttc
tggaAATTCGTGTCAtgatccccgggggggggggacttaggcaaaaatag
gtgctgggtatgtgcggacggtaagggtcgggtttttcacctttcaaagt
ctctctaagggttacaaaaatcaggaaatttcaaagtagtctctctaagg
gtgggaaaaatcacgatttttagaaaaaaattttgattttgagagaaaaa
attactaaaaagtctcactaagggtaggaaatttttgaaaatcagagaaa
atttttcgaaaaagtctctctaagggtcgctttttcactaaaatttggtc
tctctaagggtcggttttcgaaggtcccgtccgcacatacccctcattca
ccaaccctagtaccccccccggggtcaTGAtagagaacatctgtaccaat
tttcatgtcaatagctcttctagatcgatgatagaggatggtagattcta
cccctgCTGGGGCTACAAATATCGaaaaaaaCTTGGGGTTGGTACGGTTA
AGTGAAAAGAACATTATGAATTTCTTTACAATTGACATTCGGATGATATA
AAGCCAATTTATCCTTCTTTTACAGACACGTTCGCAAGCTCAACAACAGT
GCACGTTTCACCGAAAGGGAGAGATGAAGAAAATTGCGGCTTGATgcaca
aaaaatgtcaaacaatTGATCATGTATTGAAAGAATCTAACAATAGCAAT
CTGAAGTTGATTTTAGAAAACCTTCAGACTCAAAGCATTGTTTATCACAC
TCAAGGAATGTTACGTCCTGACAGTGATTATTTTCAGTTACGAATTACAA
AAGAAAGCCAAAATGGAACAAACCCGACTATATATGGAAATGGATTACCC
TTCATTCAACCCAAAGGTGCTTTCAGTATATCTATTGATCAGGTCGACCT
TCAGAATCTCGTAATTATTAACTCTATGAATCAAAACTCAAGCATTGCCA
TATCTTTTCGAAACTTGAATATTAGAACAGAGATAACAGGAGATTTTATA
TCCACCACCAACACAAACAGCAATCTTAAAGTCACTGTACAATCTTGTGT
TTTGATATCACCGACCAGGAATGCGTGGTTGAATATATCAATGAAAAAAG
CGACTTCGTTTAAATCTATCATCAAATTAACCAACAACACCATTCGGGGA
GGGCGTTTTATCATAATAAACGTTCAAGTACTTGATTTTTCACAAACAAA
AATACATAATATGGTCACTGATATCTTAACCGAGAACACTTCTCAATTCT
CGTCTTTCATAATATActtaaaacatatcaaaaacgCAGTTTTCCGTAAC
AAAACTACGATAAAGAATTccacatttgaaaatttcatataTGCATATGA
TTCGTTTATACGGATGCAAAACTTTAACTTTCAAGaaacaaaccttgaaa
atgGAATTATCAGTAAGGACTCGTCTTTAACAATTCAAAGCATTGAATTA
CAGAATACAACAGTTTATGGATCGGCATTCTACGTATCGAGAAGCATCTT
CAACGCAAATGAAATCCGAGTTGTTGACTGTGTTATGAAGGGCCGTCTCA
GCAATGTTCA Coding sequence (CDS) from alignment at sc0000068_pilon:980967..983676+ >MSTRG.10006.1.p1 ID=MSTRG.10006.1.p1|Name=MSTRG.10006.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2112bp|location=Sequence derived from alignment at sc0000068_pilon:980967..983676+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcTTGTTTTATACTACActtattgttgttgtttatgTTGAAAATACC
ACATCGATTTTCTTTGACAACTGACACGTTCGCAAGCTCAACAACAGTGC
ACGTTTCACCGAAAGGGAGAGATGAAGAAAATTGCGGCTTGATgcacaaa
aaatgtcaaacaatTGATCATGTATTGAAAGAATCTAACAATAGCAATCT
GAAGTTGATTTTAGAAAACCTTCAGACTCAAAGCATTGTTTATCACACTC
AAGGAATGTTACGTCCTGACAGTGATTATTTTCAGTTACGAATTACAAAA
GAAAGCCAAAATGGAACAAACCCGACTATATATGGAAATGGATTACCCTT
CATTCAACCCAAAGGTGCTTTCAGTATATCTATTGATCAGGTCGACCTTC
AGAATCTCGTAATTATTAACTCTATGAATCAAAACTCAAGCATTGCCATA
TCTTTTCGAAACTTGAATATTAGAACAGAGATAACAGGAGATTTTATATC
CACCACCAACACAAACAGCAATCTTAAAGTCACTGTACAATCTTGTGTTT
TGATATCACCGACCAGGAATGCGTGGTTGAATATATCAATGAAAAAAGCG
ACTTCGTTTAAATCTATCATCAAATTAACCAACAACACCATTCGGGGAGG
GCGTTTTATCATAATAAACGTTCAAGTACTTGATTTTTCACAAACAAAAA
TACATAATATGGTCACTGATATCTTAACCGAGAACACTTCTCAATTCTCG
TCTTTCATAATATActtaaaacatatcaaaaacgCAGTTTTCCGTAACAA
AACTACGATAAAGAATTccacatttgaaaatttcatataTGCATATGATT
CGTTTATACGGATGCAAAACTTTAACTTTCAAGaaacaaaccttgaaaat
gGAATTATCAGTAAGGACTCGTCTTTAACAATTCAAAGCATTGAATTACA
GAATACAACAGTTTATGGATCGGCATTCTACGTATCGAGAAGCATCTTCA
ACGCAAATGAAATCCGAGTTGTTGACTGTGTTATGAAGGGCCGTCTCAGC
AATGTTatggcTTGTTTTATACTACActtattgttgttgtttatgTTGAA
AATACCACATCGATTTTCTTTGACAACTGACACGTTCGCAAGCTCAACAA
CAGTGCACGTTTCACCGAAAGGGAGAGATGAAGAAAATTGCGGCTTGATg
cacaaaaaatgtcaaacaatTGATCATGTATTGAAAGAATCTAACAATAG
CAATCTGAAGTTGATTTTAGAAAACCTTCAGACTCAAAGCATTGTTTATC
ACACTCAAGGAATGTTACGTCCTGACAGTGATTATTTTCAGTTACGAATT
ACAAAAGAAAGCCAAAATGGAACAAACCCGACTATATATGGAAATGGATT
ACCCTTCATTCAACCCAAAGGTGCTTTCAGTATATCTATTGATCAGGTCG
ACCTTCAGAATCTCGTAATTATTAACTCTATGAATCAAAACTCAAGCATT
GCCATATCTTTTCGAAACTTGAATATTAGAACAGAGATAACAGGAGATTT
TATATCCACCACCAACACAAACAGCAATCTTAAAGTCACTGTACAATCTT
GTGTTTTGATATCACCGACCAGGAATGCGTGGTTGAATATATCAATGAAA
AAAGCGACTTCGTTTAAATCTATCATCAAATTAACCAACAACACCATTCG
GGGAGGGCGTTTTATCATAATAAACGTTCAAGTACTTGATTTTTCACAAA
CAAAAATACATAATATGGTCACTGATATCTTAACCGAGAACACTTCTCAA
TTCTCGTCTTTCATAATATActtaaaacatatcaaaaacgCAGTTTTCCG
TAACAAAACTACGATAAAGAATTccacatttgaaaatttcatataTGCAT
ATGATTCGTTTATACGGATGCAAAACTTTAACTTTCAAGaaacaaacctt
gaaaatgGAATTATCAGTAAGGACTCGTCTTTAACAATTCAAAGCATTGA
ATTACAGAATACAACAGTTTATGGATCGGCATTCTACGTATCGAGAAGCA
TCTTCAACGCAAATGAAATCCGAGTTGTTGACTGTGTTATGAAGGGCCGT
CTCAGCAATGTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000068_pilon | genome | sc0000068_pilon:980967..983676 + |
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