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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000068_pilon:893950..898514- Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10002.3.p1 ID=MSTRG.10002.3.p1|Name=MSTRG.10002.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4565bp|location=Sequence derived from alignment at sc0000068_pilon:893950..898514- (Clytia hemisphaerica_ch_hm2_pilon)
CAACAAACGGGATGGCAAAACCATGGAAAGTGATGGAACTACGCTCAGTT
TTGGTGGTAAGTTTGATTCGAAATTTTGTTTTAATATACGGTAAATTTTA
TAAATTTTCCACTATACAATCAAAAGCTCGCGAGTACCCAAAGCGAAACA
TCCTTATTTTCTATTTGGTGTTCTATATTCTCCGAAAAAAAAATTTTGGA
ATATATGATAATGGTAGGCCAATCTATATCATATGATTTGTACATCTGTT
ACATAATATTTTCTATCCATGATTTAGTTTGATTTTATTTCATCATTCAT
TTGATTCAATGTTCAAATCATAATCTCATTTCTTTGACAGTAGTGAACAA
ACAGACGATTAGACACTGCCAGACAACAAAGGGCTAACCATACGAGATTT
TATCTGTTTCAAAAGGTTTGGTAGAGATGCCTGCTATGCCTGGATACTTT
AAAAACTTAAGCATATACGAGCCTGACCAAGGGGGGACCACAGAGTGTAT
TGCATACACTTGCTTATAAAAAACATGTATATCCACCACGCGTATTTCAC
TTCATTTCTCAATAGCATTTTCCAATCACTAGATACAGTATCCTAGGACT
GATTTAGTTAAAAGGGCAACTTTGAGCCGGTCTGTAAAATACACGATACC
AGCAGGTCTCAAAAATTGACCCTCTGTGCTGCCTCAAAAATACTAGACAG
GAGACCCGCCCTGTATTTTTATAATCTGATATATACAGGACGGGTATGAC
CTGTGAGACAGATTTCTGCCTCAGAAAAATTTACAGTGGGAAATTCGAAT
TTAGCGTTGTCCTCACTTACTAAAATAAAAGCCAAATTTCGGAAGTTGCG
TTTTTTCTAAGAAAGTGTAACCAGTGAAAGAATAACAGATTGACTATGTT
TTTAACCGTCTTTAAAATCTTGGAAATTCAAACTCACAGCCCAAACCATG
CTATATTTTTCACCATCAGTATATAAAATAAGAAATCATAGCATTGATCT
CCAGGCTAAAAAAATAAATGTCACTGGACTTGTCCCACAAAATTTGAGCA
AAAAAAAATGAGCAAAATTAGAGGGGGTCCTATTTTCGGTATTCTCAGAG
ACTGATGACGTCACCCCCTCCCTCCAAGATGCTCAAGTTAAGGTTTAACG
TTTTAGAAACAATTTGAGAATATTTTAAGACTAGAAATTTAAAATTTACC
ATTTTACTTTGTAAGATATTTCAATGGCCTCACTTGAAAGGATTTTTCTC
TTATTACGAAATGGGAGGGACACAAAGACAATCAACTGAAGTCATAATAA
AAGAAATGTTAATTTCATCCTCAAGGGAACGATTTAGTCTTTTTCTTCTC
CTGCTAAAAATGAAAGTTTCGTGCGTTTGTTTCATTTGCTTTTTATATGT
GAATGAATAAATTTGAACGAAGAAATTTCTAGATCCTTTAACCTTTCATT
TTCTGAACCTCTAGTGTTGTATAATTTAGTGAAAGTACCCGTGCAAAATT
GAATTTATTCAAGCTAAGATTTTTTTAAATAAAACTAGTTTAGCTTGCAG
CTTTATTTGACAATTTGAGAAACACATTACATATTAGCACTTCTATTTTT
GTATCTTTTATCACAATTTCGTGATTCTTTTTAAGAATAAGGAATAATTT
TTTCGGATTGCATTTCAAATAGTTCGTGTGTACTTTTCTGCGTTATCTTT
GCTGTTTGTGTTGGATTAGTTCACGCAAAATTTCACTTTTGACAAATAAT
TCTATTTTAAAAACTTTTTCGACTTTTTCACATTTTGAGAAATTTTTCGT
GGAATTTATTTTTTCTCAGAATGCGATCGAGTTTCGTTTTCTGCATTGAA
AAGATTAATTTCCTTCTGAACAAAAACTTTTCAACAAAACCAAAAAATAA
TTAGTTCATCAATCTGGAAATAAATTTCCAATTCCGTTTCCAATTTTTCA
GCTTTGAATCTTCTTTTAGTTTTTGAGATCTAGATCTTCATTTTTTTCTA
ACTTCAGTTTTTTTACCGTCACAAATAAAAGTGATTTCTCGCTGAGCAAA
AAGTTTTCATTCAAAATTCAAAATTTTTTCGCCATCAATTCGGAAATATT
TTTCTCGTTCTGTTTTCAAAATTTCAGCTGCAAAGTATTTTTGGTTCCTG
AGATATAACCGTACATCCTGTGCCCAAGTTCAGGAGTTGCCATAAAGCCA
TTATGGTAATAACCGGGAGGGCACATTGCTATACATTGCATGGTTCCTGA
GATATCGAGATTCATTTTTTGTTGAATTTTTTTATTTACACGCTTTTTTT
TTTATAAGAATACACTTTATAAGAATGTCCATGATAAAAATGGCCAAAAA
ATTAAGAATATGGTAAGAATATCACCATCATGGAATTTAGCAACTGAACC
TAAGAATGCCATTTTTAATGCATTTTAACCTGTAGATTGCCAACTTCGAT
CTTAACATAAGAATACCGTAAGAATTTTTTGGATGATTTTCTCCAAAAAG
TTAAGAATATCCATGATGAAATAAAAAAAAACCATTCTTATAAAAAAAAA
AGCGTGTACTCCGTGAAAAGTTTGAGTTTCTTCTTTTTTTCTTCAGATGT
TTGGAAAATTTTGCTCGAAAAGAAATTCGCGAAATTCGAAGAAATTTTCC
ACCAAAAACCGAACATCGTCAACTCGTTGCGTGGTATTTATGATCGGACA
CTTCTCATGACGGCTGTTAATGATGATCGTTTCGACGTTTTTGTTCACTT
GATGAAGTATCCTCAAGATTTTTCACTCGTGAGCAAACAGGGTTACAACG
TTCTTCATTTTGTTGGTTGGTATGGAAAAGTTCGTCCTTTGGAAATGTTT
GATCAACAAACAATCGAAAAGTTGATCGATGGAAGAGACGAAGAAAACAA
CACACCGTTGTATGTTGCAGCATTTTTCAACAATCATGACGTCATCAGAT
GGTTGTTGGCCAAAGGAGCGGATCATGAATTGAAAAACAAATTTGGTCAA
CGCCCTGATGAAATGGATGAATGTGATGATGTTACCAAAGAAATCTTTCG
ATCGTTTCGTTTGTCTTGGTAAGTAAAATATCAACTTTTTCATGATTTTT
AAGGATTGAAATATTTTCGATATCAACTTTTTCATGATTTTTAAGGATTG
AATTATTTTCGGAGTTTAAAAATTTTTATTCTATTATTGCGAGAAGTGTT
GAAACTTTTTTTTTATTTTTTAAATAGAAGTGAAAAGTCTTTAAATTGTT
CAATCGAATAAATTTTATCTTTTCGGAGTTCGAATGAATGACACGGATGA
ATTTTCGTTGCATTGGAGCAGACATATTTTGGAGATGGTTGAAATTTGCA
AATAGATGGTTGTTTGTGGAATGTTTCTCAAGTTGTCATGAATTTATTTT
TTGGTGAAGAAAGAAATTGTCGTTTTTTGAGTTTATCGATCATTGTTCAT
GTGCTTCAAATGTTTTTCATTCGATTATTTATTTTTCAGATTGATTGATT
GTTTCCATTGTTTGTTTCATCGTTTCCAATGACGTCATCGGTTCCAAATT
ATTTCCACGTAAGTATATTTAATCATGTACTTGGTTTCCGGCTGATGTGA
AATTGCCTGCAGCTTAAATGTTTCTGCATACCGGAATTGTTTGAACAAAT
GAACCTATTCTAAAACTTAGAAATGAGGGCTTGGTTAGCCTGTACCAAAC
TCTTCTTGGTGGTATAATATGTACAGTTCGGGCTTTTATGTGACTGAGAA
GAATCCACTCAAGTCTCGGTTGTATAGAGTTAAAAGATTTTTAGAATTTA
AGCTTCTTTAATTAGGCGAGACCAATTAATTTGTTGTTCTGCGGGCCCGA
CCGACCCTATTTTTGCTAAAATCAAAAAAATGATAATATTGAATTTCCAC
TACAATATATTTTACACACTAGTTATTTGTAAGAATTAACCTTGAATAAA
ACTGAAAATTTATTCAAGAAATTGAAAAATCATAAAAAGCATTCCATACA
CTAAAATTTTATTATGATCTTCATCGAAGTAAAAAACAAAGTGAATTTTT
GATCCAGATACTTTTTGGAAAATTTTCTCGGTACCTTACCGACCTTACCA
ACCCTGATAAATGAAAAATTTATTCTTATTTTGCCGACCGACCCATACTT
CTCCAACGATCTGTCCGTAGAACAATAAATTAAATTGCTCTCGCCTTAGT
CGAATAAATGCAATTGTTTTTGTACTCGGTGTGTTTTAAACTTTTCCACC
ACATCAGCATTCTCATTAGCCGCTTCTTTAAAAAAACCATTTATTCACCT
TCGAGTTAACAAGTTTCGTTGTGCAATTAACCTCCAAAATTTTCATTTTT
TTTATTCTTAGATTCCCAACATGACAGCACGCATGAGAAGTTACACCCGT
CATTTTTGACGCCGTTTCTACGATTACGTTATTTATTCATTCCGTCTCTA
CAGTTCTGTTTGCGTTCAAACATTACTACCTTCATTTTGGCTTGTTTTTA
GATGTATTTTTACCACTTCACTAACTTGACTATTATTACGTCAACCGTCA
CTAGTTTTGGTGGTG Coding sequence (CDS) from alignment at sc0000068_pilon:893950..898514- >MSTRG.10002.3.p1 ID=MSTRG.10002.3.p1|Name=MSTRG.10002.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1584bp|location=Sequence derived from alignment at sc0000068_pilon:893950..898514- (Clytia hemisphaerica_ch_hm2_pilon)
AATGTTTGGAAAATTTTGCTCGAAAAGAAATTCGCGAAATTCGAAGAAAT
TTTCCACCAAAAACCGAACATCGTCAACTCGTTGCGTGGTATTTATGATC
GGACACTTCTCATGACGGCTGTTAATGATGATCGTTTCGACGTTTTTGTT
CACTTGATGAAGTATCCTCAAGATTTTTCACTCGTGAGCAAACAGGGTTA
CAACGTTCTTCATTTTGTTGGTTGGTATGGAAAAGTTCGTCCTTTGGAAA
TGTTTGATCAACAAACAATCGAAAAGTTGATCGATGGAAGAGACGAAGAA
AACAACACACCGTTGTATGTTGCAGCATTTTTCAACAATCATGACGTCAT
CAGATGGTTGTTGGCCAAAGGAGCGGATCATGAATTGAAAAACAAATTTG
GTCAACGCCCTGATGAAATGGATGAATGTGATGATGTTACCAAAGAAATC
TTTCGATCGTTTCGTTTGTCTTGAACAAACGGGATGGCAAAACCATGGAA
AGTGATGGAACTACGCTCAGTTTTGGTGAATGTTTGGAAAATTTTGCTCG
AAAAGAAATTCGCGAAATTCGAAGAAATTTTCCACCAAAAACCGAACATC
GTCAACTCGTTGCGTGGTATTTATGATCGGACACTTCTCATGACGGCTGT
TAATGATGATCGTTTCGACGTTTTTGTTCACTTGATGAAGTATCCTCAAG
ATTTTTCACTCGTGAGCAAACAGGGTTACAACGTTCTTCATTTTGTTGGT
TGGTATGGAAAAGTTCGTCCTTTGGAAATGTTTGATCAACAAACAATCGA
AAAGTTGATCGATGGAAGAGACGAAGAAAACAACACACCGTTGTATGTTG
CAGCATTTTTCAACAATCATGACGTCATCAGATGGTTGTTGGCCAAAGGA
GCGGATCATGAATTGAAAAACAAATTTGGTCAACGCCCTGATGAAATGGA
TGAATGTGATGATGTTACCAAAGAAATCTTTCGATCGTTTCGTTTGTCTT
GAACAAACGGGATGGCAAAACCATGGAAAGTGATGGAACTACGCTCAGTT
TTGGTGAATGTTTGGAAAATTTTGCTCGAAAAGAAATTCGCGAAATTCGA
AGAAATTTTCCACCAAAAACCGAACATCGTCAACTCGTTGCGTGGTATTT
ATGATCGGACACTTCTCATGACGGCTGTTAATGATGATCGTTTCGACGTT
TTTGTTCACTTGATGAAGTATCCTCAAGATTTTTCACTCGTGAGCAAACA
GGGTTACAACGTTCTTCATTTTGTTGGTTGGTATGGAAAAGTTCGTCCTT
TGGAAATGTTTGATCAACAAACAATCGAAAAGTTGATCGATGGAAGAGAC
GAAGAAAACAACACACCGTTGTATGTTGCAGCATTTTTCAACAATCATGA
CGTCATCAGATGGTTGTTGGCCAAAGGAGCGGATCATGAATTGAAAAACA
AATTTGGTCAACGCCCTGATGAAATGGATGAATGTGATGATGTTACCAAA
GAAATCTTTCGATCGTTTCGTTTGTCTTGAACAAACGGGATGGCAAAACC
ATGGAAAGTGATGGAACTACGCTCAGTTTTGGTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000068_pilon | genome | sc0000068_pilon:893950..898514 - |
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