sc0001257_pilon (genome) -

Overview
Namesc0001257_pilon
Unique Namesc0001257_pilon
Typegenome
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)
Sequence length2977

Sequence
The following sequences are available for this feature:

genome sequence

>sc0001257_pilon ID=sc0001257_pilon|Name=sc0001257_pilon|organism=Clytia hemisphaerica_ch_hm2_pilon|type=genome|length=2977bp
CCAACTATTTTGtaagtttgaagtttttaacATGATTTGACAATTTAGTA
TATGTTTAAATACAGTAATGCAAGaatcaaaacctttttttagctATAAA
TTTGACATTTTCGCGACAAGatattttcgcggaatttatttcttaaattt
aaaggaaaattacttactttaaatttactactttatttacctgattaTGC
TGATATGATGAATTTCGCGGAGTAAATTTTTGCGAGTGTCCATATCCTTG
CGAATTTTCTATCTCaaaaaaaTTAACGGAATTAATTTTCCCGAAAAAGG
GCTAATTCGTGAAAATAAATTCAGCAAAAACTTCttcaaataaataattt
ttttctctgcaTTCCATCATAGATGACAAAGCTATCAATGGTGAATCGGA
AATTGGAGAACCAGAAAACGAAGAACCATCTGCCaaaaaaaCCAAGATCG
TTAAGGTACCTTTATTTATAATTGAGCATATGCCAAGCAAACCTTGAGAA
GGTGTTctcattttttctcatttgaaacaaatcaaaatgaaacattattt
ttctttcccaAAAAGAAACATAAGAATCATATGAGATAATACAACACCTA
AACCTTGATAATGAAGATTTTCAAATATTGACAATTTGGCTTAAGAAAGA
TTGAATGTTTCTTTTATCAGAATAAGCATACTTTAAGCATTTTTaaggct
caaattttcaaagccttaAGCATAATTGGAGCAAAAAATTGCTGAtgctt
aaatttaaaaaatctgtaaCATAATAATTAACGATTTTTCAGGTTATCAT
CCTAACTTTCTCGATGGTCAATTTTGATCTATTTTCCTAAGTACTTTATT
TCACTCCTTCGTCTTTAATAACCGTTTGTCTATTTAGACTTGCCAACACT
GTGAAGCACCAATAAGTATAAATGCTAGTCAGAAGTGTGCTAATTgtgga
aaaaagcaaaacaaggtttgaaatattttaacataAAAACCCTATttata
ttaatttcattttaacgAATGAGAACTGAAAAGAATAGCATTTTCCTACA
CTTAGTTTTGCGAATCATGGTATTGATATTGGTTTTCTGGATGATttcgt
ttgtttacattttacttaTGGCTCTGATTACAACTCTGAATCTAATTTCA
ATTCCCAAAGTCATTTTCTATTCTCTCGTCTTTTCACATTTGTTaatgac
ttcaaaagcttattaAAAGTGTGTATTCTAAGCCTTACAAATGCCTGCTA
TTTCTGGAAGGCAATTCATCTTAACTGCTCAAAtcatttttcgagttaaa
gaCTATTTTACGTTTTGAATAAGTTAAACGTAATAGCGAAATCATCTATT
GCGAATGAAGACATGGACCATCAAAGAATCAATCATGGTATTAGGAATCA
ATCTTCAATcttcttattttatttatagTGCTGCCAACATTGTATGAAAC
CCATGACTTCAAATGCAGCCAAACAATGCCATCTATGTGGTAAAAGGCAG
TTGACAAAGGCTGAAAGGATGGGAACCCTCGATGACGCTGGCCCAAAAGG
AACTATCGATCAAAGTGCTCAAAGATCCATAATTAGAACGAGAGTCAGTT
AAATCTTTATACGTATTTGTTTTAAGTTTAGCCAGGTGTCCTAAATCTGA
GACGGTTAAATGGTTCGGAGCTCCAGTAACATACCTTCCttttgatttta
gattaatgcaccatattttatctgtgataaatttatttaataatttcttt
tttccgggCGTCCAGGATTCGTTTTTATTATCCTTGGAATTTCAATCAAA
CCATacaacaatttttcttttcttttttcatcttaGCTCAATCTCCTcca
caaaaaggaaaataatcaTTGTATCGTTCTTTACTTGAGTGGAGAACAAC
GGATACACGTGGACAGTTACGCCACGCCAGGCTTTGCGAAGCATTTTATG
GAGGGGCTATCAATCGGTGGCAATCTTTTTGGAGATGTCATCAAAGACAC
CTTTAAAACTGCGTACAAAGGTACATTAATTGAATCTTGCGCCGTAGGTA
GTAcctctaccattttgatttttttctttctttgttacCTACAACTTTAA
ACAATTCAAGAGATCTAAGTCAAATTCTTGCAATATTTTGAATACATGTG
TTTACAATTAGAATATGTTTTTAAGATACggcatttttaaacaataattc
TGATTTGATAGACCATTATAATGATATATTTCCCCTATTATTTAGAATAT
CAAAAAACAGACACCGGGAATTCTGTGCAGACGTCTACCTTAGATGCCTC
GGATGCTTCACAAAGTTCTTTTTCGGCAGGTATTAGAAACATACATCCAG
TCttttaaagtgatttttccATTAAAAAATTGTACATCGGATTTAGTATC
TGGAAAGTTTCTGCAGTGGGAACTAATCTTGTACATACGGGGTATATACG
TACTTTTTATTACATACTACAGTTCGGTTTAAAATGCAGGCAGACTCTTT
CTATTTCTTGGAATTAGATAGTGTTGTTTAATTTTCAGGATCAATCACTT
CTCTATCCGCGCAGTCCAACGTTGCACAGCCACGTTCGAATCCTACTGAG
CTGGAATTGCAAGATTCTTTTACGGGAGGTATAAAGTAATCTAAGTTTGA
TAATATGtcaatgtttcacattttggaGTACATTAGGACAATAAAttgta
agttttcttttcagattTCAAATCTGCTGATCATGCTAATAAAACCTTCT
CTAAATTTCTCTAAATTTTAGTTTCCTCTCGAGAGAGAAATCCAAACGAC
ACCGGATTAAGTATCTCCGAACCAGCAACGACCGTTACTGGTAAGTTTAT
TCATACTTGTTTGCCCCTATGCTCCTCGTGCTAACTTACACAGTTTTTCA
CAAACAAAATATTATGTAATCCTCAAATGCTATTCAATATGTCACGGTAC
ACTTTCCCATTttcttttaatcaaaaa
Gene-mRNA-Prot
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
XLOC_017189mRNAXLOC_017189:888..2019 +
XLOC_017189-CDS-sc0001257_pilon-1585905426:888..965CDSXLOC_017189-CDS-sc0001257_pilon-1585905426:888..965:888..965 +
XLOC_017189-CDS-sc0001257_pilon-1585905426:1429..1593CDSXLOC_017189-CDS-sc0001257_pilon-1585905426:1429..1593:1429..1593 +
XLOC_017189-CDS-sc0001257_pilon-1585905426:1837..2019CDSXLOC_017189-CDS-sc0001257_pilon-1585905426:1837..2019:1837..2019 +
XLOC_045028mRNAXLOC_045028:351..1956 +
XLOC_045028-CDS-sc0001257_pilon-1585905426:351..455CDSXLOC_045028-CDS-sc0001257_pilon-1585905426:351..455:351..455 +
XLOC_045028-CDS-sc0001257_pilon-1585905426:888..965CDSXLOC_045028-CDS-sc0001257_pilon-1585905426:888..965:888..965 +
XLOC_045028-CDS-sc0001257_pilon-1585905426:1429..1593CDSXLOC_045028-CDS-sc0001257_pilon-1585905426:1429..1593:1429..1593 +
XLOC_045028-CDS-sc0001257_pilon-1585905426:1837..1956CDSXLOC_045028-CDS-sc0001257_pilon-1585905426:1837..1956:1837..1956 +
XLOC_017189polypeptideXLOC_017189:888..2019 +
XLOC_045028polypeptideXLOC_045028:351..1956 +
XLOC_017189-CDS-sc0001257_pilon-1586247426:888..965CDSXLOC_017189-CDS-sc0001257_pilon-1586247426:888..965:888..965 +
XLOC_017189-CDS-sc0001257_pilon-1586247426:1429..1593CDSXLOC_017189-CDS-sc0001257_pilon-1586247426:1429..1593:1429..1593 +
XLOC_017189-CDS-sc0001257_pilon-1586247426:1837..2019CDSXLOC_017189-CDS-sc0001257_pilon-1586247426:1837..2019:1837..2019 +
XLOC_045028-CDS-sc0001257_pilon-1586247426:351..455CDSXLOC_045028-CDS-sc0001257_pilon-1586247426:351..455:351..455 +
XLOC_045028-CDS-sc0001257_pilon-1586247426:888..965CDSXLOC_045028-CDS-sc0001257_pilon-1586247426:888..965:888..965 +
XLOC_045028-CDS-sc0001257_pilon-1586247426:1429..1593CDSXLOC_045028-CDS-sc0001257_pilon-1586247426:1429..1593:1429..1593 +
XLOC_045028-CDS-sc0001257_pilon-1586247426:1837..1956CDSXLOC_045028-CDS-sc0001257_pilon-1586247426:1837..1956:1837..1956 +