MSTRG.12017 (gene) -

Overview
NameMSTRG.12017
Unique NameMSTRG.12017
Typegene
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000089_pilon:418968..431667+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12017 ID=MSTRG.12017|Name=MSTRG.12017|organism=Clytia hemisphaerica_ch_hm2_pilon|type=gene|length=12700bp|location=Sequence derived from alignment at sc0000089_pilon:418968..431667+ (Clytia hemisphaerica_ch_hm2_pilon)
atcccaAGTGAGATATTCCCAAATGACACTGACATTGGTATAAAATGGCA GCAATCAAGCAACTAAGTTTGAATTTATCTTAAAATTTGGTAGTCTGTCT AGATAGTTCCAAATAATCGTTTTTTAACATCTTCTCAAACCTTCCAAAGT CGAAGATTTCTTAGTAAGTTTGGCCAGATTTGACTTCGCCATGAAGAAAA CACAACGCTCCTCGGCCAACAGCAAAGACACCAAGAAAGCTCTATCTCAA GAAATAATGGCTGGAAGTGTAGTTAAAAAGTATGATGAGCTCATCAGATG CACCAACGTATTAACAGAAGGAATAGAAACTGGTAAGAATTTTTATATTA AACCCTGATGAttaggctcttccagaaaaaaatccaaaaggaGATGGGGG AGGTCATCATCATaaagtgtcctcccccccccctttactttatactagcc atagctttcactaactgccacccgcttgtacaaatgcttgtaaaaactaa ttaatgctaattaaggctttttaatgctttatagcaaaagtttggaaatg atttggaatagttagaatgattcttctcaacagcattttctttgagatat caatgaataagctaacataaatgaaacatatttttttctaaacatgtgaa ttactttttacaaagaataaaatacgaatcttaaaacattcattaggaaa agtgtccaggtagaatcaattacagacagttacatagatactaaaccagt caaaagacatgcaactatatttatttcaaccaatttgaaatataccttaa gggaagaaattttcgtgagaagaaattttcgcggaagaaattttcgcgga atttaatttcgcgaatttgggtgtaattcgcgaaattaaattccgcgaaa cacaccaaaatggctAAACCGCGAAAtaaaattccgcgaaacacgaatat tctcacaattaaaaaaatcacccctaaaattggtctttttagggcaaaat agggctTTTCGTAGACAAATGATtccctcaaccgcgaaattaaattccgt gaaacttttgaaatcgactcattcgcgaaattaaattccgcgaaatttgc catttttaaaactctgattcgcgaaattaaattccgcgaaaatttcttct cgcgaaaatttcttcccttaaggtaaatgaaacatagtagaaccaaacag cataagaaatgctatgagccagaaacataacgagcaggaaccaaaaattg acaggtaacaacgtacttaggagtttttccaacggtttaacaAATGATAT CGTGatacaaaattgtttacattaaatggatttaccagtgatctagaagc tgtaacagcgtcgtgtaaaggatggaagatgataggacgtaacgtggtaa tagtatcagtaacgaggcaatattgatgagcaggaagcaggtattaacag gaaatagcgtacattcaggactttttccaacgacatgataagggatctca tggacaaaattgtttacaataaaaagatatgccagttatcttgcagttgt aacagcaatatcgtgtagaaggatggaaaatcatgacgtaacgtggtaat agtagcagtaacgaggtaatattgcgttgtcaatgtaaacaaatcctcat tcataaaaagcttaaagggaaaaataagaaacatgaaattagatgtaata tggtgagtgtactgaaatttcctcaaaaatagttcacaaaagtttctttc aatctttgataataatttcccaaatagtgcctggtaagtatcaacaagaa cacaggttaataaacataaagattaataaaaccaagtcttataaaagtag acaagaaaaaaaaatatttgtacttaCTGTCGAAGTACCATTTACCATTT ATAGTTACAGTTTggttgccaattcaaccaccaacaataatcacttttat ccatattcaatcattgttctactattatcattgtaatcattgttcattat tggGGATAAACTGTTTTGTTTAATcccaaagtcaaaagtaaatcatAAAT GCGTTTTGACTGCATGAGGAGAGAGCTTGAATTTAAGaaaacttccagaa acttctccattccatttcctgcatgttgaccaatcgggcaaaattctaca agcggaatagaatctactctcgaaagctgagtaaaatgcccgcggcgcct gctataaaaaagaagtttttaggctagcaactgccgtcccggaaaaaaaa ccgaacatttacggaagagactaactacggggatgcttgcgcgacaaaac aaaaaaacaacaaaatttcgagattccagtccaatatctatgcgtgaaac tatgagtgcctcctcgtcgctgcgctcctgcgggggcaattataaagaaa aatggggCAAAATCagaatcttttttataaattataagGAGAAAAGATTC TGATTTTACCCCATTTTTtgaccagacggtactaatcaataaatttgatt atcatcgatcattatcgattactttGATCACAATCGAATGTTCGATTGGT CCCGTCTGGTTTTGAGGTATGagggaaaatgaaatttgaaatttttgaag gaCCCTCTCTGGGCGCTCCGGAAACATCCGGAGCAAAAAGTGCTGttttt ttCATGCTCCGGAACACTGCAAAGTTCCGTAGCACTTCCGGTGTTCCGGA GGTAGATTTTCAGTGATTGGTCTGCACCGGCACCCGTGTTCCAAAAGACA AAACAATGGTTATGCGTCAATCCGTTCAGCTGaccaaaatgacacaaaaa tgaaaaaatgacctGTCAAGACAttctaatatctttttgtttggtaaagc aaccaatttcaaataaaaagtatcTTGACAAGGAATAAAATAAGCTTTTc atagagtcccctgcccagttggcgaccggtccagttggcgaccggtccag ttggcgaccgaacgtctttgaacccagaaaagtcatacaaaaacaaacct ctggagaatttcttttggtagtaatctgccttgacctatttcccgtactg tgtaaaaaaagttctagaaaagaacgagtagaatccgaaagatccaactt tgcgCGGAAGCACATGAAAAACccggattttttgaaaaaaataaaaaatg gctacctgtggacaaaaaagcttcgtaagaaaaaacgcttcaactcccac tccaaaaaatacttgtccaaaacgatgcatatgttagaaagcatttctgt aaaaatcagctcgatacagttttcttcgtttgaaatattgataaaaaagt tgatgcaatcagcttcgaaatttgacgtccagtctgcgaccgaccaaact caaaaaatgaagactctccatagaccgccactttcaaaacaaaacaaaaa caaactttagaaaaaaatggcaacttgaagaaaaattctgaaaaaacatg ccgaAGGGAAATGTAATACCGGAAAGCTTATGAGtatttttatcatcctg atcaattaatatgaccttacctgcaagtagagcactgattttttctttct cgcgatcggtcgcagactggtacgtcggtcgggaactgggcactagtacc gctcgcttcgaaagtttttaattctaagaagatcgcctcaaataaaaaat caaaacaaacacgaagagcatgttaaaagttgtcgAACTGTTggtcgaaa aggattttcaaaaaagtaaaaagtaagtgaaaaatttgaatcaaaaaatt tcggtcgccaactgggcagggtactctatAGCCAAACAGAATtaccatag cttttaccaaaaaagatataaagattcaatttcagccattttcagccaaa tccaacttTTGTTCTTCCTGGGGCTTCGTGGAAACTTATCCTGTCCATGT GTAAACATTCCTGTATGTTTGTTATGTACTTGGTTGACTACCCGTTGTCA AACCAGGATAAGACGGGGGTActgcaataaaaagttatgaaagAAAAACT ATAATTTCGACCTCAAAAGGTGACTTTCTTTGCCaataatttttgataga attgttCCCCTAATTTCCCCTTTTCAGTACACAGTTGGTCTTCTTCTATC TTATATGcttcagaaaaacaaaaacattgcccTAAAAGCTTAGCCTCAAG AAGCCCCAGCTAATGATATAGCCCCCTGGTTATATCTTTGTATTCTTATC CTATAAATATAACCAGGCTTCGGCATATTAGGCGTGCGATCGCACACGCA CGCCTCCGCACACGCCTAAAAGCCTTTTAGGCGTGCAATTTATCACACGC CATAAATCATGAAAACCTAGCGAGGCGTGCGATCAATCGCACGTGCAAAA ATTTattctagaaatattttttcagaagatcaaatatcattttctacttt aatcataagaaccaaatagatGAAAGATAAACTTTCCTTTACTCTTTCAA ACTGCTATATGTatacaaaatttcttattaaaaagTTACTCTAATGGATA CACATCATCTCtcttagtctacacaatagacagatccaggcttttaggcc ttactcttggtctataggcactgctataggcggccactagtgacccccac cgggaattgcttattaataggtttaaacataatagacaacattcacaaaa gatgtttatcaatagagattttaaataaaagagtgtttaaaacacagctg attggcttaggtttcgaaactctctattatttcattaaaacctcagtgcg catgcgatttatctggagaatttcaatattcaaaacaagagcagtgctca tagcccgaagagtaggagttttacgctcgaaacgaaggaagatatgacgt agcctacttCTCTCTCCTCTTTCTCTCATACTATGCTTTGGTCTTCAATA AACAAGCCtttctcaaaaataacttttgctgCACGATTTTTCGTCTctct aaaacctttttaaaaaaatcacttttgatGTATGATTTTTCCTCTCTCAA ATCTTTTTCCTTCCCTCTCGCATGCTATGTTTATGAGGTCGTTGGTTTAT GACAATAAACTAGCTCTTCTTAAAAGTTACTTTTGCTGCATGATTCTTCT TCTCATTTGTTTTCCTAAAGTAAAGTATTCTCCTTCGTGATTATTCAGTG CTCttttggtttctgtttttgtttttcaaatatgaaGATTGAATATACAC TTTCTTCTTTCCTGTTGTCTAGTTTTTATGTAGATGAAAGAAAGATCATT CTTAGGAATTgcctaaattactaaaaattactatgtaggcgtgcgatgat cacacgcctttttttttcttatgccgaagcctgtaTAACGGAACAGCCAT TCTATGGAAATTGCTGTCACATGACTTTTTCTACCGCGTGATACAAATCG CGTATTTTCATCggatgttgaaaatttatttgttaCGTCACAAGAAGTTC CGacttcacattttcaaaaaataaaatggcaAAAGGACgttttttatgtt tatgattattgaaagaattcagttgattttaaggttttgattatttcttt ttcttttgccatGTTTaccagggctgcaaataaaatatttttagtcaacc ggacatcatgtccgacagaaatgaaatcctgtcggtcaaactcaaaaacc tgtcggtcattcagtgtatataattttttttaaatacggagaaagcgagt aggaaaaataaaagttacctttgaacagtttgttaggcaaaaactttttt atttattggtttacggGCCCGCCGATGTTATTTTTGCTTAAatcgaataa aaataaaatagagatttcaaaaacctttatttattttttctcctcCGACA TGcaaaaaagaggaaagaaataaaaaaactttactttaaacagaaaagaa gagaatgagagagagGGTTTAGATATCGTAATGATATAACACAGCTGTGA AGATACTTTTGATCCTTCCCCCAATGCCAGGGAACTTCCCCATTATTTTA ATGGAATTTCCCCAATGGATTTACTTcccatttctttttcttttttcatt tctttctttttttataatctcttttatttaaaatcctttctctgatttta CTGTTGAAATTTGAGAGTAGGTATAAAAAGATGAAAGATGAAAGGCTAAT TAAATTGTTTAACTGAAAACCATTGTTAAAATGAAAGTAGAGAACAAATA ATAAACCATTTCTgctattcttttttaaaagtctctttctttttcCTATA AAATTGCTATTATAACGATTGTTCTTTGTACTGTTTTGAAcagatcagat ttttttttcaagagaaatttttttctgcacgTGTGAGAGTTGTTGCAGAG AAACTTGTTTATTTTGAGCTCTGACTGCTCACTTGGCAGCTTgaggaaat ttcataaaattttattttttaatttcctccgattttagattctaaaaaag aaaataaaaaaaaatcaaaaggtcaatttttttccatccttctCTCctaa attttacctcaaaaagcccgtaaaccagaaaataaaaaagtagttgcctt actgtatataacagaaattgattcgataaaagtgatcttagaaacacctt TTGACATTACGAtgaaagcaagttgataaaagttaacttagaaacactct tgaaagttatgaagtaagcaagtttatgaaaatggtcttaaaaaaactct tgaaagttacaaagaaagcaaataattaagtgatcttagaaacaaagaag gttacgaagaaagcaagttgacaaaagtaatttagaaacacccttaaaag agttataaagaaagcgggttgataaaagtgatcttagaaacaaagaaagt aacgaagaaagcgagttgataaaagttaacttagaaacactcttgaaagt tatgaagtaagcaagtttatgaaaatggtcttaaaaaaactcttgaaagt tacaaagaaagcaaattgataattaagtgatcttagaaacaaagaaggtt acgaagaaagcaagttgacaaaagtaatttagaaacacccttaaaagagt tataaagaaagcgggttgataaaagtgatcttagaaacaaagaaagtaac gaagaaagcaagttgataaaagttaacttagaaacaccctgaaagctaca aaggaagcgagtattaaaagaataggctgagtaagagacaggggtgtaag agatttattttcaactctcaagttaatggtttattccttttttcattcgg acatcacgaccaacacaaaagattttcagtcggtcaaatagctttttcag tcggacattgaccgatgaccgacgcttatttgcagccctggtGTACTAAA AGATTCTGCAATGTTTGGGGAACTTAAATAtccaaaagtttttctatttt tcatggaaaaatgagctactgtataaaggcaatttctttgcttaaggttt gttttttctttgtgaatttctttaaagatttaatattttatcaattatct TGGGATTTTCAGGGTTTATTCTAGAACTATTTGGGAGTAAAGAGCTTTTT ACAAATCTTAAAAAGGTTTACTAATCATTAGATATAGTCAAAAGTTTAGA CATTGGTAAAACTTATTTCTCCGATCGAACATTGTATTGACACAGCATTT CCTTATTAGACATGCGTGCCGGAACTCCGTAACGTTCCGGAGAAGATATC CGTGGTAATGATTACGATAGCACTCGCTCTGCTAATCATGTGAAAACTAA CTGCACACAcgtgtatttaaaaaatcaGCCGACTCATGGAAGTGAAACCt tgtgttttttaattttttcaatatttctacCAGTGATGCTTCCGAATATA ATGtcacaaattcaatttcattaatggctgaaccatcatatcaatatttt gaatattttttgtaaccatGTTTAAACGGTTTTTTAGAATGTGTTAAAAT CACTTGCTCCGGAAGAGCTCCAGAACTTTCcagagagaaaaatagtgttt tttagcTGCTTCGGAAAACTCCGGAAGTTTCCGGAGCGCTGGGAGGGTCC TAAATTTGATGGGGAGAAATAATAGTaaaagtaaaaatccgtgttccttt aattgaaacaaagaaaagaaagaaatagaaaacaaatcaaacagGATTCT AATctcctttttttgaagtttttttacactttttaagaagtgatttttaa ctttaaaataatgatcataacttttgaaccaattaTTCAAATGTAAAAGT ATTACATCAAAACTTAAGTTGGGTTATCCCCAATTTTGAGTAAATTAAGA TCAACCTTACAGGTCGTTTTGATAGCTTTAAAAAATGTCACcaaacatcc aaagtttttttgGACTGCCCTGCATTTGAAACAtctgtttaaaaattgtt ttcgttATCCTCCCATTCTCAGAGTTTGTGAAGTTTGTGAAACATCAAGA AGACAGTAGGAAGAAATGGCAACATGTGGAGGAGGAAAATcacgaaatga aaaaatatatggCAAAATATAAGGTATGATTTTAGCAAATTTatcgttta aaaaaatttaaaagtttttatttttgcacaCCTCAAAGTTGCACAACATA TATCTTTGTTATTTCAGAGATTGCCCAGTAGAAAATTTATACCACAACAA GGGTATACGTTTTTTAAAGTGtgaaaatacaactatgaacttgtttgagg aagaaatgatttttgactttaaattttaattatttcaaatttatttttca ggcATCAAAGGACACTCTTGATATCCAACTAAATATGGCAAGGTAATATC ACACGTTGACTTGAACTtgtgtttcatttgaattaatgGGTCCTTGTAGC CTGCTTATAAACTTAAAATAAGATAATTGGCTGCCTGAAATCACAAAACA ttctaaaattcatttttaatcaAACACATCCCaacttttattcaaatttt tgttatttagaCATCAACTCGATGCAGAGATTAAGAAGAGACTGAAAGCT GAACAATCTGTAGACCACATGGTAAATAGCATAAATTTCTATCGAAGCCT TGTTTATTCAGGAATTTTTGTCTGGTTACTACTTTGAAAGTTTGATATTA ACTAGCTTTTTGGACCTATACCCCGGtagggtggaggtcctataaattaa cctgtgttcgtcctttcgttcgtttgttaccaacttttctcaggattggc tcattagttttttctgatttttggcacaaagatgcaaaatggcaatgccc aaaatgtgatggagcccaattttcgaaaaaaaacccaaaacatggccgag tttatgccggaaatcgccattcttttccttataattggttgttttttcat tcaaaaacattattaatagcaatgcccaccatcaagtatgtttcaatttt caataaaattgttttttgatgctggaactatttaaaaattgcCAGAACAG CTgagatttcttgattttctcgagttgttcttcgtattattctgcatttt catactattgttgtaTTAttaatcttcaggtaggtccattcagcatgcaT GTAGCTTTTTACTCTGAAATTTGTTATAGAAGGTGTAAtttttttAGTAA GCCTCAACTCTGAACTCAAAGTTTATACaatcatgttttttttgttagGC TCGCCAACTTCAATTAATCAAAGAATTACTCTTGGACAAAGACGGAAGTG GAGATACAAAATTGGTCTTCGATAAATTGCAACAGCAAATCAACGATACG GTTGGACAGCGAGTTGACAACGAACAACAAGCAGACCTGATTAACCAAAG GtgataatatttttttagcTACTCTCTGGAAAGGTGCTTTTTGGTGATTT GCTTTAAAAAGGGAGCTTTTTCAGATTGTTAAGAATGTTAGATAGTTGGT CCTTTAAATGAGgattcttttttaaaatgaCATAAACTGAGCATGAAAGt ataaacaaaattttcctttcatTTCAGTTACACACTTGACGAATCATCAT TTGATTTACCGGCATCTGAATACGACAATACAGAAGATGATATTTTGGTA TGCCAACAACAACGTTGTTATCATCGTTAAAAGTTGACCAGACAGTGTAG AGAGTTTTATTGTATAGAAAATGagtttatttttaatgaaataattttat ttatggaagtcaagattttattttttgtatataaTCTAGTTCGTTTGTAA AGGTTTCAAACAATTAAACATGCAGCTATAGCAGTTTCTATTTtaacaga aaattttgaggatttagGGGATAGGGGATTTAACTCTCTGAGATGAACTT ACAAGCTTCTGCTCCCCAGCTTAGTTTGATTGTTTGTAGCCAGATAGTGG TATTCAGAATGTAAATTTGTATTGTCAGGTTTGAATAAAGTCATATTATA AACTGACTAGCTGcatgttttttgtttgaattgaTTCAGATTTAGATAAG AGTCAATCTCTAGGATCCAGTTTAACTTgtattttgtttcttaaaagtgt aaagtaagatttttagaaatgatTTCTACTGCTGAGGATcctaaattctt catgatattGTATATTCAATCGATTTTCAGGACCTGACAGGTGGCTCTGT ACTTGGAAATGGTCGTCGTAGATCCAATAAAAGGGTATGCaaaagtattt tcaatttttctgccTATGATTATGATACCTATGATATTCAATTTCAACTA AAATAAGAccgaatttttttgcttgttacAACTAACCAATCAAATAATCT TTCCATTATTCTAGGGTCTTCCAACAGCACCACCTTTGAATGAAGTTGAT TCGACAGAAAGTGAAGTAAGACTTCAGGTTTTATTGTTTGGTTAATCACC CAATGAATTTGTGAAGGCTTCAATTAATTTTGCCCTTTTTCAGTTTATCC ACAACAATTAGTTTTGAGGCTATTTCAACTTACCAATCAACAATTTTGAG CTTCATATTTAATTCACTTgctaatattttctttttatagttgAGCACAT ATCAAGTAAAGAAAACTCGTGTTTCTGAAGAGGTAAACTTAATTTCTCCC TGATTTTTATCCCTTTGTGTATTTATGTTTTTGAAGGTTATTTATTAAAA GCTTCATAAGATGGTGTTTATCTTTGATTACTGATAATATAGTAAAAGCT TGTTTTTCATAGTGTTTTTAAatgtatttcatttttagaaaccTGCACGc aagtttaaaaagaaaagaaccaGATATTATGTACCTGAAGAGAAAGTATA TAGACAGGTTACTTATAAAATTGTTCGGTTGTTTCTTTGTAACAGATATT TATAAACAATAGTCAGTCTGAAGTTGTTTCTATCGTATGAAAGATTTAAA CAGACTTGAATTTAATTAAGTTAGATTTTGTTCAAAGAGAATCTAGaact tttctttttacagaattttgtGTGAGACAAGCAGTTTTTGAAATGttcaa aatcttattttttgtgTCCtttttttATAGGTCCATAAAACCATTGAAAC ACACGTCACTGTTACTGGTGGGAGAAGCCCAGCAAAGAGTCCaaaaaaaG CTGAAAGATTAGATAAAGATTTTTCCCGTCCACCTTCACAAAGTGGCAAA CGTCCTCCCTCTAGAGGTCATGTTCGAGCTCAAAGTACCAGTAAGTATAA TAATGCACCACTCCACTAGTATGTTTATCCTTTTTAAGATTCATTCACTA GTGTAAAATCGAAATGTAATGATTATTACTAATGGTAATACTAATTCACA ATAaactttaatttcattttagcGGACATGTCTGACGAATATGATAAAGA AAATTGTTCAACACCAAGGTATGTTCTTCTGCCTTCCTTTTTCctgtatt tgaaattttgaactcaaTTGTGCTCGTTTGTGGTGTGCTCAGTTTTTTGT TTACCCATTGGTTAAAAGCAAGCCATTTTCCATGCAGTTTTGTGTTTTGT GGAATTTCAATTCCATTCATCACCTTGCCTTGTCCTTGTGCCACCGGCAG GTTTTTTGTAAAGTTATCTAAAATGACATTGACACAACCCCTCATTAGTG AATCATGGTTTATTTCAAACTCCATTTTGCAGACCTTTTACTTTGACAAG ACATCAACAGCAACAGCCACCACTCCAACCAAAACCAGAAAACCATCATT CAAATAACCGTCACCACCATCATCAATCATTTCAACATCCCTCTCCTTCC AAACCACCCATCAACAAGTACGATCGAATCACATTGACTGAACGACAAAC TGACTGACTGATTTTCACATCTCCCACACATACACACCAACCTCAACGTA TACGTAAGACAGTTTATACCTCTTCAGCTAGTAATGAAattgtctttttc tttcaggGGATTGACAAAACAAATGACCGTTCCAAACCTTTACCCAAACT TGGACAGTATGTTGTAAGTAAAAATGGTTTTATCTTTGTTTTGTACTAAT GTGTAATGTTACACTCTAAATGCTCTACAagtaaatttggaaaaaatttc tttgtgaAAATAACCAACCCGTTGATTTCCCCCTTCTCGTAACCTCTTGT AGTTAATTGTAATTATTTTCACTCTAGGACTCCTGATCCAAAGAAGAAGT TCAACACATTGAACACGCCAAGGTCTGGCAAAAAGTTGCAAGCTCATCAA TTTGTTCCCAAAGTTGCTGTTCGTATGGAATCTTGTGGGACCTGTAAGTA
Gene-mRNA-Prot
The following mRNA feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
MSTRG.12017.1.p1MSTRG.12017.1.p1Clytia hemisphaerica_ch_hm2_pilonmRNA
MSTRG.12017.2.p1MSTRG.12017.2.p1Clytia hemisphaerica_ch_hm2_pilonmRNA
MSTRG.12017.3.p1MSTRG.12017.3.p1Clytia hemisphaerica_ch_hm2_pilonmRNA
MSTRG.12017.4.p1MSTRG.12017.4.p1Clytia hemisphaerica_ch_hm2_pilonmRNA
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000089_pilongenomesc0000089_pilon:418968..431667 +