TCONS_00065142 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065142
Unique NameTCONS_00065142
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length163

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065142 ID=TCONS_00065142|Name=TCONS_00065142|organism=Clytia hemisphaerica|type=transcript|length=163bp
CTTCGTTCCACATGGGATTTTGGTAGTTGTTTTGCACTTGCATCTGATAA
CCTTCAGGAGAGAATCCGGAGCAAAAGGTTGATCGGTCTTAACTGGAATA
AGTACACCCGCCTTGTGTGTTTTCCATCCCCATTTACATACGTCGAAGAC
AAAGAAATCCTNN
Run BLAST on NCBI

transcript from alignment at scaffold_431:57167..57329

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065142 ID=TCONS_00065142|Name=TCONS_00065142|organism=Clytia hemisphaerica|type=transcript|length=163bp|location=Sequence derived from alignment at scaffold_431:57167..57329 (Clytia hemisphaerica)
NNAGGATTTCTTTGTCTTCGACGTATGTAAATGGGGATGGAAAACACACA
AGGCGGGTGTACTTATTCCAGTTAAGACCGATCAACCTTTTGCTCCGGAT
TCTCTCCTGAAGGTTATCAGATGCAAGTGCAAAACAACTACCAAAATCCC
ATGTGGAACGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040847XLOC_040847Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065142-exon-scaffold_431-1491911889:57167..57329TCONS_00065142-exon-scaffold_431-1491911889:57167..57329Clytia hemisphaericaexon
TCONS_00065142-exon-scaffold_431-1510915933:57167..57329TCONS_00065142-exon-scaffold_431-1510915933:57167..57329Clytia hemisphaericaexon
TCONS_00065142-exon-scaffold_431-1575043694:57167..57329TCONS_00065142-exon-scaffold_431-1575043694:57167..57329Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_431supercontigscaffold_431:57167..57329 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065142 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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