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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060201 ID=TCONS_00060201|Name=TCONS_00060201|organism=Clytia hemisphaerica|type=transcript|length=456bp
ATTGGATGCGCTTTTCGGAAATAGaGGCACTGGTGCTTCCAATGTCCGAC
TTCACCACAGACGAAACACGCATTGAGTGGGACTGGATACCTGGCCGGTT
GACTCTGGTTACCGTTGTGGAAGTGGAGGTTTTGTGGGCCGACTCCTGCG
GGTCCTTGATATAGAAAGGCGTGACCAATTGATGTTGTGGCAAATGCTGC
TGTACAACCTGTTGAGGTATCAAAGACAAACCTTGGATCGGATTTTGGAG
ATGTGGAAAAGGTAAACTTTGGCTTGGATTTTGCTGAGTTGGCATAAACC
TTTTGGCTAGTGGCTGGTTgaagaaaaccgatttttgttttctttttctc
atgACTCTACCTTCTGCTCTTCGGAGCCTGGTATCGTCATCCGAGTTATC
CGCCAAATCGTTAGGCAAATATTCATTGATGGCATCCCAACCTGCTATTG
ACCGAT Run BLAST on NCBI transcript from alignment at scaffold_337:64519..65819+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060201 ID=TCONS_00060201|Name=TCONS_00060201|organism=Clytia hemisphaerica|type=transcript|length=1301bp|location=Sequence derived from alignment at scaffold_337:64519..65819+ (Clytia hemisphaerica)
ATTGGATGCGCTTTTCGGAAATAGagtaagttttgtttttgaaatcgaTT
TTTATACCCAACCATTGAATCTCACTTACAGGTTCCCATTGCGATTTTTG
ATTGTTAGCTATAAAACCAGATTTTTCTAAAGAGCCAGATACAAAATTCG
AATTTTCTGTTGCTTTCTCTCTCGAATATTCTATTGATAAACCATCATCA
TCAAACATGCTATTCTAATCCCTTGAGCACGCCAATAATTCTTAAGTACC
CTTACGATTTTGGTGAAAATAAGTGGCCTTGAGCTTAACCCAAAAGGCAA
TACCAAATACAAGAAATATCTCTCCTGTGATCCGCCAAAATCCCAagaaa
atcccaaaaacttttggttgtccTTATGAATATCCACATGATGGTAACCG
CTCTTTAAGTCGAATTTGAAAAGATATGCTTCTGCATCCGAACCAATGAA
ATCTTCGAAAACTCTCCAATCGTCAGACTTAATCTTCTCCTTCcataaaa
attgatttaaatagcTAACATCTAAAATCAACCTTTTCTTACCACTTGGA
TCTTCTGATACAGATAAAGGATTTGTCGCAAATGGTTTCTTGACCTCATA
AATTTTTCCTTCCCTTAGTAACTCTTCCAAAGCTTGGTCTACAAAATCCT
TGTCCTGAAATGctgatttattatttttaaattcaaaaggggGTGGGTTA
TATCGAAATGGTATTTTGTACCCATGTTCTATCGTCTCCAAGATATGTGG
GCTAGCCTCTAAAACCTCTCTCCAAAATTGTGCATGTCTTCTAAGGTTCC
CCTTTACCCTTGGCTTATTGtcaaataaagtaaaattaatCTTACCCTTA
TCCACCTCCGGATTTTTTAGGGCACTGGTGCTTCCAATGTCCGACTTCAC
CACAGACGAAACACGCATTGAGTGGGACTGGATACCTGGCCGGTTGACTC
TGGTTACCGTTGTGGAAGTGGAGGTTTTGTGGGCCGACTCCTGCGGGTCC
TTGATATAGAAAGGCGTGACCAATTGATGTTGTGGCAAATGCTGCTGTAC
AACCTGTTGAGGTATCAAAGACAAACCTTGGATCGGATTTTGGAGATGTG
GAAAAGGTAAACTTTGGCTTGGATTTTGCTGAGTTGGCATAAACCTTTTG
GCTAGTGGCTGGTTgaagaaaaccgatttttgttttctttttctcatgAC
TCTACCTTCTGCTCTTCGGAGCCTGGTATCGTCATCCGAGTTATCCGCCA
AATCGTTAGGCAAATATTCATTGATGGCATCCCAACCTGCTATTGACCGA
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060201-exon-scaffold_337-1491911889:64519..64543 | TCONS_00060201-exon-scaffold_337-1491911889:64519..64543 | Clytia hemisphaerica | exon |
| TCONS_00060201-exon-scaffold_337-1510915933:64519..64543 | TCONS_00060201-exon-scaffold_337-1510915933:64519..64543 | Clytia hemisphaerica | exon |
| TCONS_00060201-exon-scaffold_337-1575043694:64519..64543 | TCONS_00060201-exon-scaffold_337-1575043694:64519..64543 | Clytia hemisphaerica | exon |
| TCONS_00060201-exon-scaffold_337-1491911889:65389..65819 | TCONS_00060201-exon-scaffold_337-1491911889:65389..65819 | Clytia hemisphaerica | exon |
| TCONS_00060201-exon-scaffold_337-1510915933:65389..65819 | TCONS_00060201-exon-scaffold_337-1510915933:65389..65819 | Clytia hemisphaerica | exon |
| TCONS_00060201-exon-scaffold_337-1575043694:65389..65819 | TCONS_00060201-exon-scaffold_337-1575043694:65389..65819 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_337 | supercontig | scaffold_337:64519..65819 + |
Blast
The following BLAST results are available for this feature:
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