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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060188 ID=TCONS_00060188|Name=TCONS_00060188|organism=Clytia hemisphaerica|type=transcript|length=1267bp
GTAATATATAGAcataatttcgaaaaattagaATGTGCAGAAGCAACAAC
ATTCAGCATACAAATGATGATGTGAAATATTCGTCATCGTGGTATAGGCT
ATAGATATCCCTGATGAATAGTTAAATTAAGTGTGTATTAGTCGTCTTAA
CGATCAAAATTGTTATCAATTTATTAAGTATTACAAGAACTGTTTAAAAG
ATTCTCcacaaatttagttttttttatgtCCTAAAGTATAGACCTAGAGC
AAGCGCATAACACCGCTTTCTAGGCCAATTCTCTCTTCCTTTTCTAAACC
CTCTACCTAGACCAATCAAAACCAACACTTCAATTTCATGATTACGAGTA
AGTACTTCGTCTTCAATATAGTCGGAAGAGGTCCATGACAATATGAAATC
TTGGACATCAGTTTGAATTCTTAGCTTTGTATCCGAGGAAATGAATTGCA
AATCACGACCATAACACTTAAATACTTCGAAGGACGGGCATACAGTACCT
TCTTCGACCCAAACTTTTCTTGTCGATTGTGTGACTTCTGCTAGTCCTCC
GAATAACAATTGAAGATCGTTTTTCGAATACGGTTCCAATGTCCCAAACA
AATTTATATTAGCACGGCTGTAATCTTCTTCTGGACTGTTTTTGACAGTT
AAATCTTCGTTTTGATGGGGGAACTTTGTAATACGTTCCACATCAACATT
TAAGGTAAAATCATAATACTGTCCAATCACAAATTCATCTTCCCAACAGC
ATTTCTTTGGGCTTTGTCGATAGATAGGTCTGAAAAACTCTCCGTTTTCG
TTATCGAGTCCTATGTAACAGAACCCTTTATTCATACGAGTTTTAGCAAT
AATTAACAAATTGATATTGTCATCGTTTGAATTTCTTTCTTGACTTATTC
CTTTACTTGTAATTATTTTAAAGTCGCTGAATCCATCAAACCTTTTGCTT
TGGCTATGATTCTCTTCGTCTAGACTACACAGATTAACTGGACGAATCCA
ATCATCGACACCTGTACCTTCGACTTGAAAGTGTAATTGTAACATTTCTT
CATCACAGTTCTCACAAGATCCTGGATAATCCTCGTCTGTTAGAGAATGG
ACTCCTTCCCAATAAAATCCTTTAATATTCGTATTTAACTGTTCCAACAT
TATGCTATTAGTATCATCACCCTCATCTAGGTGGTTTTGTAAGTCTGATA
GTGATAAGAAACTTGTCGAATCACAATTGGTACATTTGATTAATGCCATA
TTGCTTTTGTAGAATCT Run BLAST on NCBI protein sequence of TCONS_00060188-protein >TCONS_00060188-protein ID=TCONS_00060188-protein|Name=TCONS_00060188-protein|organism=Clytia hemisphaerica|type=polypeptide|length=347bp
RFYKSNMALIKCTNCDSTSFLSLSDLQNHLDEGDDTNSIMLEQLNTNIKG
FYWEGVHSLTDEDYPGSCENCDEEMLQLHFQVEGTGVDDWIRPVNLCSLD
EENHSQSKRFDGFSDFKIITSKGISQERNSNDDNINLLIIAKTRMNKGFC
YIGLDNENGEFFRPIYRQSPKKCCWEDEFVIGQYYDFTLNVDVERITKFP
HQNEDLTVKNSPEEDYSRANINLFGTLEPYSKNDLQLLFGGLAEVTQSTR
KVWVEEGTVCPSFEVFKCYGRDLQFISSDTKLRIQTDVQDFILSWTSSDY
IEDEVLTRNHEIEVLVLIGLGRGFRKGRENWPRKRCYALALGLYFRT Run BLAST on NCBI transcript from alignment at scaffold_336:37690..38956 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060188 ID=TCONS_00060188|Name=TCONS_00060188|organism=Clytia hemisphaerica|type=transcript|length=1267bp|location=Sequence derived from alignment at scaffold_336:37690..38956 (Clytia hemisphaerica)
AGATTCTACAAAAGCAATATGGCATTAATCAAATGTACCAATTGTGATTC
GACAAGTTTCTTATCACTATCAGACTTACAAAACCACCTAGATGAGGGTG
ATGATACTAATAGCATAATGTTGGAACAGTTAAATACGAATATTAAAGGA
TTTTATTGGGAAGGAGTCCATTCTCTAACAGACGAGGATTATCCAGGATC
TTGTGAGAACTGTGATGAAGAAATGTTACAATTACACTTTCAAGTCGAAG
GTACAGGTGTCGATGATTGGATTCGTCCAGTTAATCTGTGTAGTCTAGAC
GAAGAGAATCATAGCCAAAGCAAAAGGTTTGATGGATTCAGCGACTTTAA
AATAATTACAAGTAAAGGAATAAGTCAAGAAAGAAATTCAAACGATGACA
ATATCAATTTGTTAATTATTGCTAAAACTCGTATGAATAAAGGGTTCTGT
TACATAGGACTCGATAACGAAAACGGAGAGTTTTTCAGACCTATCTATCG
ACAAAGCCCAAAGAAATGCTGTTGGGAAGATGAATTTGTGATTGGACAGT
ATTATGATTTTACCTTAAATGTTGATGTGGAACGTATTACAAAGTTCCCC
CATCAAAACGAAGATTTAACTGTCAAAAACAGTCCAGAAGAAGATTACAG
CCGTGCTAATATAAATTTGTTTGGGACATTGGAACCGTATTCGAAAAACG
ATCTTCAATTGTTATTCGGAGGACTAGCAGAAGTCACACAATCGACAAGA
AAAGTTTGGGTCGAAGAAGGTACTGTATGCCCGTCCTTCGAAGTATTTAA
GTGTTATGGTCGTGATTTGCAATTCATTTCCTCGGATACAAAGCTAAGAA
TTCAAACTGATGTCCAAGATTTCATATTGTCATGGACCTCTTCCGACTAT
ATTGAAGACGAAGTACTTACTCGTAATCATGAAATTGAAGTGTTGGTTTT
GATTGGTCTAGGTAGAGGGTTTAGAAAAGGAAGAGAGAATTGGCCTAGAA
AGCGGTGTTATGCGCTTGCTCTAGGTCTATACTTTAGGacataaaaaaaa
ctaaatttgtgGAGAATCTTTTAAACAGTTCTTGTAATACTTAATAAATT
GATAACAATTTTGATCGTTAAGACGACTAATACACACTTAATTTAACTAT
TCATCAGGGATATCTATAGCCTATACCACGATGACGAATATTTCACATCA
TCATTTGTATGCTGAATGTTGTTGCTTCTGCACATtctaatttttcgaaa
ttatgTCTATATATTAC Coding sequence (CDS) from alignment at scaffold_336:37690..38956 >TCONS_00060188 ID=TCONS_00060188|Name=TCONS_00060188|organism=Clytia hemisphaerica|type=CDS|length=1044bp|location=Sequence derived from alignment at scaffold_336:37690..38956 (Clytia hemisphaerica)
AGATTCTACAAAAGCAATATGGCATTAATCAAATGTACCAATTGTGATTC
GACAAGTTTCTTATCACTATCAGACTTACAAAACCACCTAGATGAGGGTG
ATGATACTAATAGCATAATGTTGGAACAGTTAAATACGAATATTAAAGGA
TTTTATTGGGAAGGAGTCCATTCTCTAACAGACGAGGATTATCCAGGATC
TTGTGAGAACTGTGATGAAGAAATGTTACAATTACACTTTCAAGTCGAAG
GTACAGGTGTCGATGATTGGATTCGTCCAGTTAATCTGTGTAGTCTAGAC
GAAGAGAATCATAGCCAAAGCAAAAGGTTTGATGGATTCAGCGACTTTAA
AATAATTACAAGTAAAGGAATAAGTCAAGAAAGAAATTCAAACGATGACA
ATATCAATTTGTTAATTATTGCTAAAACTCGTATGAATAAAGGGTTCTGT
TACATAGGACTCGATAACGAAAACGGAGAGTTTTTCAGACCTATCTATCG
ACAAAGCCCAAAGAAATGCTGTTGGGAAGATGAATTTGTGATTGGACAGT
ATTATGATTTTACCTTAAATGTTGATGTGGAACGTATTACAAAGTTCCCC
CATCAAAACGAAGATTTAACTGTCAAAAACAGTCCAGAAGAAGATTACAG
CCGTGCTAATATAAATTTGTTTGGGACATTGGAACCGTATTCGAAAAACG
ATCTTCAATTGTTATTCGGAGGACTAGCAGAAGTCACACAATCGACAAGA
AAAGTTTGGGTCGAAGAAGGTACTGTATGCCCGTCCTTCGAAGTATTTAA
GTGTTATGGTCGTGATTTGCAATTCATTTCCTCGGATACAAAGCTAAGAA
TTCAAACTGATGTCCAAGATTTCATATTGTCATGGACCTCTTCCGACTAT
ATTGAAGACGAAGTACTTACTCGTAATCATGAAATTGAAGTGTTGGTTTT
GATTGGTCTAGGTAGAGGGTTTAGAAAAGGAAGAGAGAATTGGCCTAGAA
AGCGGTGTTATGCGCTTGCTCTAGGTCTATACTTTAGGacataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060188-exon-scaffold_336-1491911889:37690..38956 | TCONS_00060188-exon-scaffold_336-1491911889:37690..38956 | Clytia hemisphaerica | exon |
| TCONS_00060188-exon-scaffold_336-1510915933:37690..38956 | TCONS_00060188-exon-scaffold_336-1510915933:37690..38956 | Clytia hemisphaerica | exon |
| TCONS_00060188-exon-scaffold_336-1575043694:37690..38956 | TCONS_00060188-exon-scaffold_336-1575043694:37690..38956 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_336 | supercontig | scaffold_336:37690..38956 . |
Blast
The following BLAST results are available for this feature:
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