TCONS_00059807 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059807
Unique NameTCONS_00059807
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1497

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059807 ID=TCONS_00059807|Name=TCONS_00059807|organism=Clytia hemisphaerica|type=transcript|length=1497bp
CTCCCCACGTGATAAAGCGCGCgctgatgaaaaaaatcaaaaatttattt
tcaaaatggctgGTTGTGGTGGAGTGAAAGATTTTCCAAAGCTTTACCTC
ATCGGCGACTCAAATACACAGttagCCTTCAGCCCAAAAGGATTTGCTGC
AAAGCTTCAAGAATGTTATGTTAGGAAATGTGATGTTTTGAACAGAGGAT
TTAGTGGTTATACAtctcaagagttattgattatGCTGCCAGACCTACTC
GAAAAGGATAAGGCAAATGGTTCAATTAAAATTGCAACTCTCCTTTTGGG
TTCAAACGATTGTGTATCTAAATCTCTTGATGTAAGGCATACTTCTATTC
CACTTTATAAAGACAATATGGAAAAGATGATTGGAATTCTGCGCAGAAAT
GGTATCCATAATATCGTTCTCATTGCCCCACCACCTGTGGATGTTCAACA
TTGGACCAAACATATGCTTGAAACTATAGGAGTTTCTGGTGGTTTTGAAG
CGGATAGCACAAACAGCAAACATTATGCAAAAGCTTGTAATGAAATTGCT
GAAAAGTTTCCAGACGTCCTATTCATTGATTTGTACAAGGAAACTTTGCT
GAATGAGaaTTGGAAAGATCTTTTTTACGATGGCTTACACTTCAGCGAAT
CAGGGAACCAATTTGTATtcgagaaaatcaaagaaaaaatcgACCCCATT
ATGGAAAGATTACCAATGGTTTATCCTGACTGGAAAAATATCGATTTCAA
CAACCGAGAAGCAAGTTTACTATAAAGATTATGTGGCTATTCTACtgtaa
gaaaacattttttaacttgatGTTATAAAATTGGGACTTCTTATCTGTTT
TGTTATCATAACTTGGTTCTTTCTTGACAAGAGTTTTAGGCTCACTTTAT
ATTATTGAAACTCTTTGTAGTTTTTTAATCGAAACATGAAATGATTCGGG
TAGCCTGATGCTGGACAGATGATCCGAGATCTCGGTACTCTGGACAAGAC
ATTTATCACTAACATTGGAATTACAAAAGAAGCAACTACACaggttgaaa
aataaagtttgaaGTCAAATCAcgtttttactcgaaatttttatgtgctt
gttacatgacttttatttctgattggttcaaatttaATGACACTcgtaaa
gttatcagctgtaaagaaagtaacatgggaataaaatcaccgtgaacttt
ttcgagtaatcacatattTTGACTGCACTTTTATAATTTTGTAACCCGTG
TATTACTAAAGCTTGTTACTTGAGGTGAATGGAAAGTTTTGGTATCTTTC
TGGTTGTTTTTAATACAAACTAGCCAACTTTGGTTGATTCATCTTGGATA
TAAGTTGTCAAGAATTCGTTTATTATGGGTATAATAcagattttactttt
taaaagaaaattttttatcactTAGGACTTTTTTAGCTCCAGGTCTAATT
TCCAGCTCATTTTCTGAGAAATTCTCAAGGCTTGAGTAGCAATCTGG
Run BLAST on NCBI

transcript from alignment at scaffold_331:573920..594467+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059807 ID=TCONS_00059807|Name=TCONS_00059807|organism=Clytia hemisphaerica|type=transcript|length=20548bp|location=Sequence derived from alignment at scaffold_331:573920..594467+ (Clytia hemisphaerica)
CTCCCCACGTGATAAAGCGCGCgctgatgaaaaaaatcaaaaatttattt
tcaaaatggctgGTTGTGGTGGAGTGAAAGATTTTCCAAAGCTTTACCTC
ATCGGCGACTCAAATACACAGGTATATAAAAGCTTTTTACCCTTGCATTG
TGttaacaaaaaagttttcaatattgcaaacattgtaagaacaaaaattt
ggaggttttaATTTCTAGTGTGTCTGTTGTTAGGGGAGGTTGTcaagtag
tccgacactttctgtAGTAGTCCGacatagcctggagatccatgctatga
tttcttattctatatacttaTGGCGAAATATaaagcatggtatgggctga
gagttttaatttcccagatcctaacaacagttgaaaacatagccaatcaa
attttattatttttttactggtcacactttcttaaagaaagcgcaagttc
caaaatttggtttttattttcgaCGGGTACacaatgcataaaacataatg
gaGTCAGTCATTGGAGTCAGTCCCTTATTAGATGAAGGTATTATCCACAC
AAACGATAAAGATAATGCTGAAATTCTTAATAAACAGTTTGCTAGTGttt
tttcagttgatgacggaACTACCCCAGAAGTTAATGGACCAAAAAGCGCT
GCAATCATGCAGATCCACATCACCAAAAATGGTCTTCTCAAACTTCTCAA
CGATCTCAACCCATCCAAAGCCAGTGGTCCTGACGGTGTTTCGGCAAGAA
TCTTAAAAGAATGTGCCAATGAAGTAGCCGACGCTCTCATCTTAATCTTT
TCAGCCTCGATGAAACAAGGCAAAATCCCTGATGAATGGAGGAAAGCAAC
CATTTCTCCTCTCTACAAAGGGGGTAACAAAAACAGAGCTAAGGCAGAAA
ACTACCGTCCAATCAGCCTCACTTCAACTACTTGTAAGGTTTTGGAGCAC
ATAGTTCACAGCCATGTAATAAACCACTTGGAAAGTGAGAAAGTTCTCAT
TGAATCACAGCATGGCTTTAGAAAGCGCAGATCCTGTGAGACACAACTTC
TGCAAACTGTACATAAACTTGCTAAAAGTATGAATGATAAAGAACAAGTT
GATAGTGTATTGCTTGACTTTAGTAAGGCTTTTGATAAGGTGGTTCATAG
AAAACTCATGATAAAGCTAAGACACTACGGTGTCTGTGGAAACATTCATG
ACTGGATATCAGACTTCCTTTCTAATCGCACCCAAACCGTCGTCNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNTTAAGAAAgtcttctaaagaggttttcg
caGTTTTAGCCTCTACttaggagagttttagaaaatataaaatctttgat
aaacaaccacgtgcttataaaaatccaaagttccgactttgatgttgggc
ccctaaacccaacttttcttaaatttttggaagCTTATTAGGATTACGCT
TTatcaagagtcaagaaattgcatttagctgtttttacgaccttTCTTTT
TTTGGTAGGCGAGGGGGGCTGGAATTAAAGTTTGCGATTTATATACTAGC
ATAattctgaacatgcaaaaagAGAGTGGACCCTTAAAGGCAGTGGATTC
TTTCTGCTATAAATTATCTTTATGCAAATTTGATTGCgtcctttatttct
aatgaTGTCAAAATGCCGctaaaatgaacttttattcaTATTATCTTATT
GAAAAACACTTATTCAACATTCGtcactctaaaatctttcgttttcaaac
aaaagtgacgtcagaaaaaaagacttctaaattgtaaatttattttatcg
ATTTGGACTATTTTACTGTTGAACTAGAAAGTGTCATACAAAGTGACATG
CACCTGTTGTTAGATGGTCATTTGCTTGAGTTTCGATCAAAGCTCATTTA
AGTCATTTTGGTTCCAAGGGGGGTtgtggcttcttcataaagacaaaaaa
catgtctggacttatttcgtactttccagtctatAGTGCCTAAGTTTTTC
TGACTTCCCGGTTctatgtgagttattttctatgttttctaaccgACTGA
ATGAATTACCGAaaagatcgccaccggtgggatttgAACCCACCAAATGC
AAAGTTCCATCGCTTAGAAACCTAACGCCTTATCCACTgtgccacggatt
catgccaggaAAGTGTTTCTGACGGATATTATTTTATATTGTATATatat
acaaactacagaccagactatattaagagaaaatcacaaaagagtgctct
TTTCGAGCtccaaaccctaaccctaactgataataacccaattcctagcc
aatctgatatacgtaaccacacccataccAACCTTACCCAGATCGCCTGC
Tatattcccgcatgccggatccgaaaaatagatatatgtctttcgctttt
atgaagaagccttcaccttcCAAGGGTGGGGTGTGCACTCGATTTAAAAA
TTAACAGTATATGcagcatagctgtcaactctcctgCATTGAGAGGGAGA
CTCTGGCATGTCAAAGATTTCTCATGCATTAAATAAATTCAGCCGAATCT
CTcgcattttcagaattttctccTGGATCTCCTGtatttccaaaaagttt
ttgaaaaatggaaaggcaaaatttcctgattttggaaTATTAGGGCAAAA
AATTCCCTGATTTCCTTGatttaccaaaaaaaattccgtcaaaaaagatt
ttgcggAAAAATTTCCATGATTTTCCAGGGGGAGGTACACAGTTAGTGTA
CTGGACCCCCTGCATTTCCtgttgtttattttgattttgaaaaatttgat
tatcagggaaaattttccaactttGAGATCTGCATTTCGGTGAGgtgaag
ttgacagctatgagTGGGGCACGATACcctatacatgtttttttttttat
aagcataacgcttataagcatataaaggctcagatttgcagaattcctaa
gcataacacgagcatatatgtcagcctaaaatatttttcaagttgtcatt
ttttatctgtttaaaaaagtttggtagaggtcaagtaaaaaataagaaat
tctacggctagctacattccactgctcccaaaatctgaacaaatttttac
aaaatttctgaaatttcattaaaaacttggctcggggtgaatcataagca
taattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTtactaatta
aaaaaaaagtttctgacccccccccccatcaagGTCAATTCTCTAAAAAG
CCTGGTTTTACCTTATTATGATCACTAATAATATATTGATAAATTATATA
ATTAATTAACTTTTGGATTTTCGGAGGTAGGATTTCGGACAGCCCCTCTT
TTATTGGGACCCCCTACAACTCTGGACCTGAGTATTCAGTGATTgttaag
tatttctttttttatatagcTTCAGTTTTTCTTCTAatgtaatgtttttt
tatttttcagttagCCTTCAGCCCAAAAGGATTTGCTGCAAAGCTTCAAG
AATGTTATGTTAGGTTTGTTTGTACATTTTAGACTCAAGCAGTTATTATA
CCTGATTATACACCTATCAACCCCTATAGCACAACGAGACTgggtttaaa
agttttgttgaattattttttaataggCCAAGAGAGCTGATGTTTTGACA
TCACTCCTTTCCATAAGGTCCTatgttaaaaattgattttgcctTTTAAA
GTCTGGCAACACTTTTAAAATATGTAGTGGGGGTCTAGAAAAGTAAATAT
AACTGAAAAGTGAGGTAGGGATTATTTTTCAGGTCCCTACCCTAAGATTT
AGGCCTAACCCAAATCGGGCTAggaaagaaaatttgcaaattaaaaaaaa
tattgaaacatagcaaagtgacccctcattttaaAGCTAATAGTTCACAG
ATCAAGAATATATCTAAAGTAGGTTTTTTTTACCAATAAAAATGATGGCC
GTTTCAAACTTTGTCTTTTTTGGACATTTCAGTGAAATTCCTTTTCGTGT
AGATTACAGTGAAgtcatgaaatttcaaaattcttttaagGTATATGTTT
TTTAAGAGGACATTATTTAGAAACTTGAAGTACACTTGCAGCATGATAAG
TACTAATGAACTCATTTTAGCTCCTGAAGTTTGAAATGAGCTTTGGTGTG
AGAACagtaaaaatatcattttatcataatGTTGTCAGAAAAATAGCAAT
CTAGAAACNATATTGAAACATAGCAAAGCGACCCCTCATTTTAAAGCTAA
TAGTTCACAGATCAAGAATATATCTaaagtagtttttttttacCAATAAA
AATGATGGCCGTTTCAAACTTTGTCTTTTTTGGACATTTCAGTATGAAAT
TCCTTTTCGTGTACATTACAGTGAAgtcatgaaatttcaaaattctttta
agGTATATGTTTTTTAAGAGGACATTATTTAGAAACTTGAAGTACACTTG
CAGCATGATAAGTACTAATGAACTCATTTTAGCTCCTGAAGTTTGAAATG
AGCTTTGGTGTGAGAACagtaaaaatatcattttatcataatGTTGTCAG
AAAAATAGCAATCTAGAAACAGAAGATAAGGATATTGAGGAACTAAATAA
GACAGAGCTAATGTTTATGAAAAGCTTATCAAAAATGAAGCCCATAACCA
AAAATCCCTTCTTCTTCTAAGAAAGACACTCAAAAGAAGCTCGTAAATAA
AGTAAATaataaagtttgaaaaacaTCATGACAAAAAATTTGGACACAAG
ATAATCATGATGAATATAACTGTCTATTTTATATCCTGGCAGGCAATGGT
AAAGATTAAACCCCAGACTATTGCAGCAAAACAGACTCCAAAATGGATGA
AAAcaggaaaagaaaatgaaaaacaaaatgaacaaaaaaggaAAGCTTAG
GCAAATAAATAtgaattaaaatcaaaaccatGAATGAATGCATTTGAGCT
TGGGGTTAGCATTGATAGTGATAGTGTAGTGATTACTTACATGAAGCTGA
AACCTACAAAGTAAATTATAGGTATGAACAAGTAGTTGATGACCCACATG
AGTTACCATTTAATTAAAGACATTGCGAGACATGGTTCTCGGTCAGTTTG
TGATGAATATTAACCAAGCAGAAGATGCAATATGTTTGTACGCAAAGATC
TGTTTGATTGTTCAAAGTCTggaacaccccttctcacagacctggtagga
ttttttcagtgGGGGTATAAAATATCAGACTGAAACTTCAGTTGGGAAAA
TTGCATACTATTTTGCAGAAGGGGTGTTTTGGAGAGTGTATGGTTTATGA
GCATGGTGAGCCTTTAGATAACAATACATTGCCTGCCTCAAACAAACTGA
ACTGAAGCATCTAGTAGAATTAATATTGGCAAGTATATCTGAAGATATAA
TGCAACTTGGTAAGGCAGTTACTCCAATGATAAGTAGTTTTTATAGGAAT
TTAATAAACTTTTCCCCACACAATGTGGTAATAAAAGAATTACTAAATTG
CTGCTTGACTTTTTACTACAGTGCTACCTTCAAGGAAGCCCTTTgttaat
tgatttgattgaaGTTATTATATAACCCAGTGGTATTGGTCGAGATTCAa
tgttttatcaatttttagaTTACTTATTTAGCTCTCATAGTCctatttct
tgaaaaaataattatttattttttcatgtaCCATCAGGATATTTCAGAAA
TTCTTATATATTCTGTTTCACTACTTCATAAGCTTTAAAATGAGGGCTCA
CTTGACTATATTTAGAAGAAATCTGAAATTTTCGATTTACGGACAAGGGC
TGAAAAGTGACGTGTCTAGAATCGGGGGTTGGCACCTGAACTTTTTCACC
TACCCTAAAAAAAAGGGTACTCTACTATATACTTTGAGAGGGTTGCATAC
TTTGTATCCTAACATAGGAccgctacacgttttttttattagaacaccta
aaatttggctgagcctggatgtgcttattttttttagcaattttcagcct
aaaattttcttaaatgcgttattaatttttcatattactctaaatcgaca
atatcatgcaaaataaagagcacttaaacacgacttaaaattggtaaaat
ttggacagtatttaactctcgattttagaaaatccatctttaagttcggt
taaaactgcttgaaaagaggaaaaaattgtagtttctggtcattttcttc
caaactgaggctgggcatgttcttacgatgtacGATGtaatttttcgaca
aatttcagcctgaatgttcttataaactgggttctaataaaaaaagaagt
GTACTCCAGTAAACTATTCCCTAGTCTTCTTGAGGAGGGTGTATTGTATG
TGTTGGACATGATATGTGTACCTATAAATTTTGATCCATTTCTTAGAGCA
TACCACCAATGCACTTATTACTCAAAATACTAACTGAAGTAATATTCTTA
TTCTGTACTGATCCATTTGCTTTAAAAGTGTGAACTAATTCTTGTTTGTT
TACCTGTGTTGAAAAGATGTTTTAATTCTAACACATTACATGTGCCATTG
AAAAGGTGATTAAAATAAGAGCACTTTAATTTTCGAGAGAAataacttca
aatttttttaaaaaattgacaaGAAAAAACCCCTTTTTTGCCAATGAAAA
GCCTTATTTCAACAAATTTTGCTTAGGTAGTAAGGTAGACTTTtaataga
aaattaaataatttgtTTTGTCGTCTttatatttgctttattttaaATGA
GCCATGATAGAATTGAAATTACAAATTTATATTGATTGTATATATTTGAA
AAAGCTTATAGAATATCTGTCCAACTCTAGTGTGGCAGAGCAGGtgtatg
catttcgtccttattgcTATTGTGACTCATCAGTATACTGCATACTGCCT
CCTGGCTAGGtgcatatttcttttttcacaGCTAGACTTGAAGTCTTTTA
TAGAATTAACGTTTGCTCAAATTTCTAACGCCTGGGCAGCAGTACTGCAA
ACCATCATCTTACATATAGAAAATAATACACTTTTCCAGGAAATGTGATG
TTTTGAACAGAGGATTTAGTGGTTATACAtctcaagagttattgattatG
CTGCCAGACCTACTCGAAAAGGATAAGGCAAATGGTTCAATTAAAATTGC
AACTCTCCTTTTGGGTTCAAACGATTGTGTATCTAAATCTCTTGATGTAA
GGCATACTTCTATTCCACTTTATAAAGACAATATGGAAAAGATGATTGGA
ATTCTGCGCAGAAATGGTATCCATAATATCGTTCTCATTGCCCCACCACC
TGTGGATGTTCAACATTGGACCAAACATATGCTTGAAACTATAGGTAACT
GCTCTTCCCATGAGTTAAATGTTTGATTCTggcttttcatttcattttca
ctttttaaaatgttttaaatcaGCATTTTCACAACACTGAAATCAATTGA
AAATTGTCCTAAAAATAGACATTTCTGAAAATCAAACAGAATTAAATATG
CAAGGCTTGTGTCGCTGAAGGTACATACCAATGAAATACactcatttttt
ataagcataatgtTTATAAGTATACTTTAGGCTCATAGTCGGTAAAGAAT
AAGTATAATGTTAAGCATACATTCAAGctgaaatacaaaaaaagttCGTG
TAACTTTTCTAAAGCTCTGATctttttagggttacttttaaaACTGTTAG
AGCTTTCTTAGAAGGTTTTCGCACGTGACGCCAAATTACAAAGTTCCGAC
TTAAAAATTTTCACGAACCTAAAGAAAGTCAACAAATCGAGCATATAAgt
aagcataaattaaggcttaaaatgagattttcctaagcatattgagcctc
gacccgattttcccgtatgcttataaaagaaaaagagggTATCAGTACTC
ATCAGTAGGGTAAAACTAGCCTGTCTCAGGACGCTCTCAATCAAGCCCTT
TTTACGTTCCTATCGAGTCCACTCTTTTCCACTCTAGTTCTATCGATCAT
AATACCTTATTTAGTTCTCCTGACCTTTACTTTTTCCTGCTTCTTCAGGA
GTTTCTGGTGGTTTTGAAGCGGATAGCACAAACAGCAAACATTATGCAAA
AGCTTGTAATGAAATTGCTGAAAAGTTTCCAGACGTCCTATTCATTGATT
TGTACAAGGAAACTTTGCTGAATGAGGTAAGTTCTATCTTTTGATTATTC
TAAGATCTtacaatacacgggttgcaaaattatatcagtacaggcaaaac
atgtgattactcgaaaaagttcacatgattttattcccattttacttgct
ttacaacttacagctgataactttattagtgtcaatgaatttgaaccaat
cagaaataaatgtcatgtaacatgCACATAAAAATATCGAGTAAAAACGT
gatttgtcttcaaactttaatTTGCAGCCTGTGtacaattaaaaattttt
tcagttattGAAAGTGTTGATTTTTGGCGCCATACGACatgtttttcgcc
aaaacgaggccaaAACTTTGGGGGTGTCCTGGAGACTTAAAGTATGGTCT
GATTTTGTTGAGAGTTTGTACTTTTGATCATGACAATgcgttttgtttgt
ttttaaaacttcaTTTTTATGTCCTGGGACGATTTTTATTGTCAAAACAA
GGAAAGGCTAAAATCTAAGCTTACTTATAGATTCTGAAATTGGAAGCTAG
GGCAGTGCGTTTGGTATGTTCTAAAGTGAGAGAGTAGCTGGTTTTGGTCT
TGTAACGTTGTCTGTGATTCAATATATTTACCTATTTTCTTGGCTTATCT
TTCAATAAACAATGTTTACAATCCTaaaatgatttcttttctttcgAATA
CTTTTACTTTTAGTGCAGTCTAAATGTGCCAAAAGTCATTAACATTGTGC
ACAAAGGCGTACAAGCATGAGACTTTGCACAAttgtagtttaggggtcaa
aaatggatttaaatctcagacccaaaaatTTGGCACTATTTCACTTTACT
TGACAAATAACAACATTTTCCTCACTTATCAAACCGATTATTTCAGTTTA
GAGATCTTTGAAATGATGCCTTACTTAGCCTTTTCTGTGCCAgtgtaggc
tgctggcatccactaacggattcgtgctcctcatagaggatgcttaataa
gcgatattttctttgtccagagatttgccgcctttagccgatgtacggct
aaagacatttttagctggcgagggtctacaaaaataacattacgtaatgt
ttaaattttctgtgaggcaccaaatcatagattggaaaatatatttggat
ttcgaaaaaaaagtaggcggaaggaagtttgcttctttttcttcctcctt
tcttgtttaatgtggagattttgtaaaagattagaaattagatttatcaa
atgtatcttctgtgtgcaccaacaaaattttgattcataaaactacattt
tgatgcttgaatttggacttgtaggagtgtataattttttgccacactgg
attcgttgatcactttggctccagataattgttttgtcagttctacagat
atgttgcagattatttcatgGTAttttagttatgtatatacagtacattt
tgggggctatattgaatatttatacattacttctttatgattctacaaaa
gggagtgttgttattcccttgttaaatgttaaaacaaacaaaaatctttt
cttcagctttggcatttcacttttcgatactgtttggcctttgtgtttat
ctttttcatgtactcagcttcaattcttttgaagagattggagtgttttt
ggttgtttcctttcacttttttgttcatACTTGTATTTTTGAGTTTCGAC
CGAAGGGCtgaaggaaaagttttgataaatttacagaccagatatcttat
aaaagcaaaagtcaaaaataaatttacagaccagatatcttataaaagca
aaagtcaaaaataaatttacagactgtagaaaatgcgcgcatcagattgt
ttgttatctttttttctgttttgtttttctggtctgggattcgaatttcg
aatgtaaacattctATAAACGtccgaaacgatcgtttttgcgcgcacatc
aatggcaatcaaattattaactcgccaaaattctgtaaaatacatcgaat
taaaaaaaaaccgaacctgaaagcggttggtaggtcattaagcagaccta
tactacctggggttttgtagaggtctgcgattcagactagtgcCAGTGTC
GATGTTATTGAAGAAAGCGAAGTCATTCAACCATAATTTTGTCTTAAAGA
Cattctgactttttgcacaaagatgcgtattagcaatgcccaaaacatgg
cctattctgatttttgaacaaattttttttccggccgaaaatgccagaaa
tatgccggaaattattgtttttgcaggttttcattggactttttcctcat
atttttttattttttttttcacacaaaaacattattgataataatgtcca
ccatcaagcatgattcaattgtcgatagaactgatttttgcatccggaac
tttctattttttccctactactcttccctctcccccaatcaacaatcaat
gataaaatttcatGAGTTATGCAATATCGCTAAACGCTATACTTCAGagc
tgattgttttcatttttctccttattgctatctaattttcatcatcaggt
aggtccattcagcatctagcttgtttgtttgaaatttacAGTAATGTCTC
TTGCTTCATACTCTGTACccgagtgtatctcacgtttatcgcttcggcaa
ttaattttgaaataagccaTAAATACTGAAGGTGTTTCATGGCTcaacaa
aaaagaatttgaaaattggTCTGCTCTTTTACCAATTTGGATATCTTCTA
CTAGCCTCTGCCCTCTAACGATTTCATTTGAACCTTCATTCCTTGTATTC
CTCCATCAAACAAGGCACTTATTATAACAAAGAGAAGACTCTAAGCTATT
GTTGTAATGGACCTTCTAATTTCTAGTTAGATATGCAtacccagacggca
cacaacgtcaaaacaacgtccatgtgacattcataacgtccaaataacgt
tatttgaacgttaaaacaacgtcgtgtgccagctgggtatgaGAGTTTAC
TGTTTGAATTGGTGAAGATTTCTAGGGCACTTAAAGGGTCAATGGGTACG
TACGTTACACTCACATTTTATAAAATATGCTTTGGGACTCGTTCATTTAA
AAAGGGTTTATGATTCAAGTCTTATCATCATCTTGTCACGCGTGCACGGG
AAGCATTTAGATTAATTTTAACATCCATTGCTGTTAGCGCAACACAGCTT
ATATAATACAAAACAGTTCTTatacaaagttttcaaaaactttaaaatgt
gTCAAAGGCTTTCAAAATGTGTATTGTTTCTttaatatgaaaattttttt
caagaatgttataaattttttatttgctaATAGTCGACGAAGTCTTCTTG
GTCAAAAGCTCGAACGTGCGTGCTTTCTTTTTTTGAAGCAACGGTAAAAT
ACTTCTATACGATTGTCTATAAACGCGACTGGATGCTCCATAGATAAAAA
CATTTCCAAGACtgttcaaataaataaaagaggACAGAATAAACCATAAA
TTGCCATGCCAGCATTTGTTGGTGAGATTGGGATTTGCCATAAAGATAAT
TCTGTAGGTAATAGCTGGTGTCCAGAGTAATATGAAAGTCGCCGTGACAT
ATAAAAAGATAATGTTTCGCTTGTGGTTACGGTTTTTCTCTCTATGCGAA
CTGACGTCACTTTTCACTTTTCGTACTGTTAGCTTTTTAATGGTTCTCAG
ATGATAGTACACTTGTGTTAGAATGTAAAAATACACTGATAGATTTGTAA
TTAATGGTAAAAACACACTTACAACAAGCCGAGATATGTCGAACCATATT
TCTATTTCTTCCTTGAAAACAACTTTATAACTGCCGAATATTACGGTTGA
GTACATCCAAATAAACACATAACAAAGCAAGATTGTTTTCTTTCTGACCA
TGTTCGTTTTATACGGGAATCGAACGGTGATAAAGCGCTCAACGCTCATA
AGCATTAACACCAAATTAGGGATAGGAAGTATTGCCCTCCATAGATACCT
GAATGTGAATATTAACTCTTGGTTCGAACAAGCGGCTACTTCGTACTGCT
GTTTGTTGCAAGCGATCAAATCAAAGGCGTCAAACGGTACCAAAATGACG
GATACGGTTAAATCAGATATGGCTAAGAGAAGTATCAGTAAGTCTTGATT
AGTTTTATAAATTCCGGTTTTTAACATGGCTATACAGATAAAAATGTTGC
ACAATGTTGATAAGGTTGCCAACAAGGCGAGGAAAGAACCTAATATGATT
TCGATGGTTGCTTGAGAACCTCCCGTAGCACAGTTCAAATAAGTGTCGTT
AAGAATGTGGATAAATGTTTCGTTAATTCCTGACATCAATCCACTGGTTG
TATCATTGTAGTCATTGTAGTACTCTTCTGGCAATGAAATGCCAAATGCT
GATTCACCACCTGTTGCTATCGAATATCCATCCATTTTGATTGTTGCTGT
TATGTTATAATTTTTCCCTAATGCGTAGATTACAATATATAGAGTTTGAT
TTTCGATCTTGAAAAGCTCCTTTGAAAGTCCTTTTTTACCAGAAAATACC
AAATAAAAGAAACTTACTTAGAAAATAGAGTCTTTTCATTATTCTTGTTG
CTATGGTATTAGAGACAGCATCAGATTTTCTGTTCTGTGTGTTTTCTGTT
ACAGATTGTTTGAAAACTCGTTCCTGTACAGGGCGTACAAAGGCTTTTTA
CAGtcaactttctctaattcgaacgtctACTATTCGattctttctgtaat
tcaaactaaaatattATGGTTTAAATTATTCTCTGTAATTCAAAtccttc
tctaattcgaagaaaatatttggaagattgaattagagagagttaaaACT
GTAATGAAAGGTCTTAAATctttaaaagtttcaatttttttacgtttctt
agatttcaacgaccatttaggtcattatcgaaacgttttctctccatcta
tatctttattaccttcatggtccTTCCGCCCAGATATTTTCCATTTGATT
TGATTAGAAGTGAACTTTTTGAAGCTTGTAAATAGTTCTTCATTAAAAAT
TAATAATTCAAAACATTagttcaaaaagaaaacttaaTTCTTTTTCGGAA
TAAAGTTTGGACAGCTTACTTAATAATCTATTTGAAGTTGATGTGAAAAT
CAAACAGAAAATGTCACATCTTTTAAACTAAAAAACTTAAGCGATTTGCT
TGGATAAAAGGCGGATtttaaatgaaagaaattaattttgaaacatttga
tTTAAGAGAAGACACTgtcgtacacgtttttttgtaagaacatccaaaat
ttttgaagccttcggaagttcttaactttttggggtttcaagcctaaaga
TGCTCTTAATCTCTTAACATGTTATTTAGCTTATTTTTAAGTccataaaa
ccttaaaatgttcttaacttgttcttaacatttaggCCGTGtttcgaagc
cttatgttcttatatagtttgttcttataaaagaaaaacgtgtactttaa
tcaatcaatcagttAATCAATTAAAGCAAGCTAAGTAAAGTTTTTCTCGA
CTTTCTCGAATCTTCATAAACTAGATTGATGATCAAAgagaattttaaac
aaaaacaaaaaagctaaaatttcaGAATACTCCTTATCTTTATAATTCCT
GATCTTGTTCATAAAGATGTTTTTCAAACATGGTAAAAGATAAAATTGTA
AGAAATTCTcattaaaattgtaaaatgtttcTCAGAAGACATTCATCAAA
CTCTTAGgctccaaataaacggccccccgcttgttaatttttcgaaaatt
ttccaactccCCAGACCTTATTAGCCCCCCCCCTCATtaattttcaagaa
tattttcagctgccctaaatagcctgattttagcatATATTTACCTTAAT
TTTTTAGAAGtgcaatttccaacccccccggcaattagacCCNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCccgc
cgtttatttggaaccaaAGAGTACCCCAATAGTTACAATAGGTGGAAAAA
GCAAAACACAAACTGATTTCGATCTGACGTTCTGCGAAACGATTGTGTTT
AAAAACCAAATAGATATATTGTACGACCGCCTATTTGTTTGctcttttta
aacgttttcttCTTAATTTCTTCTGTAAATCTTGGAAGatatggagtttt
tacaagcttttatttgatttggttggtcgtcaaccagtaataaaaacaat
tttgttactttttctaaagaacgcgtcgtttttattacttcaaatgacca
attattaaagtatcttataaaaactccatctgaTCATCTGGTAAATCTAC
CtcgctctgaagatatctgttTGCCTAAAATTATTATTACTTTTTCCAAT
TGTAGGCATATTGTAGACTACGctattgttttaattttcaatttcaattt
ccaaAAGATACCAAGTATTCGAAAATTGCATTCATCTTAGATTCTAAACA
AAACATACCATGCTaatgaaaaaaagatatttcaattttgaaaattttga
atataatcGATATTTATCAATCATTGTTAAAAATAGACGTAAAAGACGAG
TTAACATGTCAATTCTACTTGCCAATAGCTTGCTCTCTGCCGGATAATAT
TCAAACAAACCCTGAGTGTGAATAAATTTAAAAGCTTAACCTGGCATCAT
AGGTCAAATTAGTATTTACACATATATCGTTACCATTACATGTtgcattt
tttcagaaaattttctgaaaggaAAAATTTACCACATGATCCCCTTTAAA
GTTGTCCTGATAGCGAGTGAGGGAAAGACTGACTTCTATGGGGGATCTGA
TCCCAGTCAAAGTTTAGCAATGGATACTTCCGGAGGGTTATTTACTGCAT
CTTGTAATTGTTTATTAATGAAAGTTCATTCGATTTAAGACGCTAAATAG
CACTGTTTCTTTCACCCGACCCGATGAGGATgtattaaattgtttttttg
tagaCGGGCCCTACTACGGGGGACCATGATGGATTACCCTTAGGTGCCTa
aataaccccccccccctcgctcgttaattttttgatttttttcaacccat
tccccggaccttattagaacccccccgtttacaaatttttgaaaatattt
ttagctgtCGAAGGAACAGAAcagtcccttattttgctctaataGTCTAT
AATTACTTTATTTTTGGAGTGCTTAGAAGTACATTTTCCAGCCCCCTTCC
CGGCAATTTTGTCCTCCCCATTTATTTAAGTTTTAcgatttccaaccccc
ccccggtTTATTCCGATCCTccccgtttattaggcacccgagagtaaggG
AAATGTGCCTACCTAATCATGGTAAAGGACGAATCTTCAAAATATTACTA
AAATATATGTCTTTTTTGACCAAATAAGGCCAAGTGTAAATGGTGAAAAG
TTGTCAAAAAGTCGATTTTGTTAGAAAGATGTTGGCATTATTTAGACtat
tttggtcaaaaatatcCATGAAAGTTTTATGCTCGTCAAACCATATTTTC
CGCAAATATAcgaatttcctattagcagatcagagcagattcatgtaaaa
aagtacgaaaaacgtcgagtaaatctctgattggctgaaacatgcaaaga
ttacctcacACTCTGGACATATAAAATATGTTTACGTATGCAATTTGCAG
CCAATTTTTATACTCACCGTTTTtccgtgacttttttacatgaatctgct
tATAGGAAATTCATGCGTATGTAACCAGAAGTCTCAAAACCctgttaaat
ttttgtttagaaTTGGAAAGATCTTTTTTACGATGGCTTACACTTCAGCG
AATCAGGGAACCAATTTGTATtcgagaaaatcaaagaaaaaatcgACCCC
ATTATGGAAAGATTACCAATGGTTTATCCTGACTGGAAAAATATCGATTT
CAACAACCGAGAAGCAAGTTTACTATAAAGATTATGTGGCTATTCTACtg
taagaaaacattttttaacttgatGTTATAAAATTGGGACTTCTTATCTG
TTTTGTTATCATAACTTGGTTCTTTCTTGACAAGAGTTTTAGGCTCACTT
TATATTATTGAAACTCTTTGTAGTTTTTTAATCGAAACATGAAATGATTC
GGGTAGCCTGATGCTGGACAGATGATCCGAGATCTCGGTACTCTGGACAA
GACATTTATCACTAACATTGGAATTACAAAAGAAGCAACTACACaggttg
aaaaataaagtttgaaGTCAAATCAcgtttttactcgaaatttttatgtg
cttgttacatgacttttatttctgattggttcaaatttaATGACACTcgt
aaagttatcagctgtaaagaaagtaacatgggaataaaatcaccgtgaac
tttttcgagtaatcacatattTTGACTGCACTTTTATAATTTTGTAACCC
GTGTATTACTAAAGCTTGTTACTTGAGGTGAATGAACTTTTGCCTTTTGG
GAAAAGGTTTTCTTGGTTGGATTTATCACATGGAAAGTTTTGGTATCTTT
CTGGTTGTTTTTAATACAAACTAGCCAACTTTGGTTGATTCATCTTGGAT
ATAAGTTGTCAAGAATTCGTTTATTATGGGTATAATAcagattttacttt
ttaaaagaaaattttttatcactTAGGACTTTTTTAGCTCCAGGTCTAAT
TTCCAGCTCATTTTCTGAGAAATTCTCAAGGCTTGAGTAGCAATCTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037625XLOC_037625Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059807-exon-scaffold_331-1491911889:573920..574040TCONS_00059807-exon-scaffold_331-1491911889:573920..574040Clytia hemisphaericaexon
TCONS_00059807-exon-scaffold_331-1510915933:573920..574040TCONS_00059807-exon-scaffold_331-1510915933:573920..574040Clytia hemisphaericaexon
TCONS_00059807-exon-scaffold_331-1575043694:573920..574040TCONS_00059807-exon-scaffold_331-1575043694:573920..574040Clytia hemisphaericaexon
TCONS_00059807-exon-scaffold_331-1491911889:580080..580132TCONS_00059807-exon-scaffold_331-1491911889:580080..580132Clytia hemisphaericaexon
TCONS_00059807-exon-scaffold_331-1510915933:580080..580132TCONS_00059807-exon-scaffold_331-1510915933:580080..580132Clytia hemisphaericaexon
TCONS_00059807-exon-scaffold_331-1575043694:580080..580132TCONS_00059807-exon-scaffold_331-1575043694:580080..580132Clytia hemisphaericaexon
TCONS_00059807-exon-scaffold_331-1491911889:583659..583963TCONS_00059807-exon-scaffold_331-1491911889:583659..583963Clytia hemisphaericaexon
TCONS_00059807-exon-scaffold_331-1510915933:583659..583963TCONS_00059807-exon-scaffold_331-1510915933:583659..583963Clytia hemisphaericaexon
TCONS_00059807-exon-scaffold_331-1575043694:583659..583963TCONS_00059807-exon-scaffold_331-1575043694:583659..583963Clytia hemisphaericaexon
TCONS_00059807-exon-scaffold_331-1491911889:584668..584795TCONS_00059807-exon-scaffold_331-1491911889:584668..584795Clytia hemisphaericaexon
TCONS_00059807-exon-scaffold_331-1510915933:584668..584795TCONS_00059807-exon-scaffold_331-1510915933:584668..584795Clytia hemisphaericaexon
TCONS_00059807-exon-scaffold_331-1575043694:584668..584795TCONS_00059807-exon-scaffold_331-1575043694:584668..584795Clytia hemisphaericaexon
TCONS_00059807-exon-scaffold_331-1491911889:593530..594200TCONS_00059807-exon-scaffold_331-1491911889:593530..594200Clytia hemisphaericaexon
TCONS_00059807-exon-scaffold_331-1510915933:593530..594200TCONS_00059807-exon-scaffold_331-1510915933:593530..594200Clytia hemisphaericaexon
TCONS_00059807-exon-scaffold_331-1575043694:593530..594200TCONS_00059807-exon-scaffold_331-1575043694:593530..594200Clytia hemisphaericaexon
TCONS_00059807-exon-scaffold_331-1491911889:594249..594467TCONS_00059807-exon-scaffold_331-1491911889:594249..594467Clytia hemisphaericaexon
TCONS_00059807-exon-scaffold_331-1510915933:594249..594467TCONS_00059807-exon-scaffold_331-1510915933:594249..594467Clytia hemisphaericaexon
TCONS_00059807-exon-scaffold_331-1575043694:594249..594467TCONS_00059807-exon-scaffold_331-1575043694:594249..594467Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:573920..594467 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.4689	20.0682	29.0672	37.4099	13.1735	9.71325	11.0828	9.54037	12.5192	8.16981	13.0783	12.8069	7.18344	8.88978	7.54267	8.45927	8.16458	8.28994	3.71016	3.28893	8.34712	7.33268	17.7626	17.7599	4.32097	5.91699	10.704	9.29381	16.6001	12.0129
Blast
[Close]
BLAST of TCONS_00059807 vs. Swiss-Prot (Human)
Match: IAH1 (Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Homo sapiens GN=IAH1 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.520e-33
Identity = 82/248 (33.06%), Postives = 129/248 (52.02%), Query Frame = 2 
Query:   47 IFKMAGCGGVKDFPKLYLIGDSNTQLAFSPKGFAAKLQECYVRKCDVLNRGFSGYTSQELLIMLPDLLEKDKANGSIKIATLLLGSNDCVSKSLDVR-HTSIPLYKDNMEKMIGILRRNGI--HNIVLIAPPPVDVQHWTKHMLETIGVSGGFEADSTNS--KHYAKACNEIAEKF-PDVLFIDLYKETLLNENWKDLFYDGLHFSESGNQFVFEKIKEKIDPIMERLPMVYPDWKNIDFNNREASLL 772
            + + AGCG    +P+L L GDS TQ +F   G+ A L +  VRKCDVLNRGFSGY ++   I+LP L+ K  +       T+  G+ND   K  + + H  +  Y  N++ M+  L+   I  + ++LI P P+    W +       +  G + +  NS    YA AC ++A+    DVL  DL+     ++++     DGLH S  GN+F+F  +   I+  +  LP++ P W+++     E SLL
Sbjct:    3 LCEAAGCGSALLWPRLLLFGDSITQFSFQQGGWGASLADRLVRKCDVLNRGFSGYNTRWAKIILPRLIRKGNSLDIPVAVTIFFGANDSALKDENPKQHIPLEEYAANLKSMVQYLKSVDIPENRVILITPTPLCETAWEEQC-----IIQGCKLNRLNSVVGEYANACLQVAQDCGTDVL--DLWTLMQDSQDFSSYLSDGLHLSPKGNEFLFSHLWPLIEKKVSSLPLLLPYWRDVAEAKPELSLL 243
The following BLAST results are available for this feature:
BLAST of TCONS_00059807 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IAH11.520e-3333.06Isoamyl acetate-hydrolyzing esterase 1 homolog OS=... [more]
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