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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059805 ID=TCONS_00059805|Name=TCONS_00059805|organism=Clytia hemisphaerica|type=transcript|length=1081bp
CTGTCTtggctttttaaattttaaggacTTCGACTTTTGGGGACTGGGAC
AATTTGTCACTATTCCTACAATCGAACCCTCGAATAGTTGgaaaaatact
gaagttgagcccattGCGGTCACGTTCGCCTATAGCTTCAATTTTCGCCT
TAATTCTGTTTCTTATTCTAACATTGGaaatttgcattgttttttctttt
tttctaggaTTTCATGTTTTTCGAGCAATCGGCCAACCAAGACAATCAAA
TGACAATTAACGGTTAAAAGTGCCGGCATCCGAAAAATCTTAAGTAGCAA
GTAGTGTGACGTAATCTTGTTCTAAGCACATATATGGTAGATTTAGACAT
ACATGTTATCACTAATCACTAACCAGAACTAATAGGGAAATTGGAAGAGT
CTTATAGTTTTATTCGGTtttatctttttagaaatcacacaatttaaaaa
aaatgattcgCTAGGATCATGTTTGCTTTTATGTCTTTgtgtgaaatttt
tattttgaaatgataattttatttctgatttttgtatattttgattttgg
gttcaactattttttttgtaattcagataatttttttgtataaataatCG
GATCTTGGAAGATAATATAGGAGTAGTATATAGTAGTTTTTAAACCAATA
AAGCTTCCGGTGTTggatctattcatgatatgcatgacgtaatgttttat
acggcaAAACCCAAAATGCCCTGGTGTTAACCACtaattttactaatttt
caaaattagggGAAAGACCCTGTTTTTTTTGGGCCCTTCCGTGTATAAAA
TATTACCTCACGAATATCGCGAATTTTAATCACTTACAATTTCTTGGTGA
TTCTGCAAATATAACCACATCACTACAGCATCATTCGATTTAATTTTTTG
GCTCCTCATTATTGATTAATTATTATTTTGGTTTAAAGTTTAactaattt
gatttaaaaaatgtaaatcaCATACCGTATATATTTTAGTTCAGTTTGGT
CTGCTGGTTTGTacataataaatatttttagaaaatcttgattcgatttc
ttgtctttgaaataaataattactaaaaata Run BLAST on NCBI transcript from alignment at scaffold_331:546120..547200+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059805 ID=TCONS_00059805|Name=TCONS_00059805|organism=Clytia hemisphaerica|type=transcript|length=1081bp|location=Sequence derived from alignment at scaffold_331:546120..547200+ (Clytia hemisphaerica)
CTGTCTtggctttttaaattttaaggacTTCGACTTTTGGGGACTGGGAC
AATTTGTCACTATTCCTACAATCGAACCCTCGAATAGTTGgaaaaatact
gaagttgagcccattGCGGTCACGTTCGCCTATAGCTTCAATTTTCGCCT
TAATTCTGTTTCTTATTCTAACATTGGaaatttgcattgttttttctttt
tttctaggaTTTCATGTTTTTCGAGCAATCGGCCAACCAAGACAATCAAA
TGACAATTAACGGTTAAAAGTGCCGGCATCCGAAAAATCTTAAGTAGCAA
GTAGTGTGACGTAATCTTGTTCTAAGCACATATATGGTAGATTTAGACAT
ACATGTTATCACTAATCACTAACCAGAACTAATAGGGAAATTGGAAGAGT
CTTATAGTTTTATTCGGTtttatctttttagaaatcacacaatttaaaaa
aaatgattcgCTAGGATCATGTTTGCTTTTATGTCTTTgtgtgaaatttt
tattttgaaatgataattttatttctgatttttgtatattttgattttgg
gttcaactattttttttgtaattcagataatttttttgtataaataatCG
GATCTTGGAAGATAATATAGGAGTAGTATATAGTAGTTTTTAAACCAATA
AAGCTTCCGGTGTTggatctattcatgatatgcatgacgtaatgttttat
acggcaAAACCCAAAATGCCCTGGTGTTAACCACtaattttactaatttt
caaaattagggGAAAGACCCTGTTTTTTTTGGGCCCTTCCGTGTATAAAA
TATTACCTCACGAATATCGCGAATTTTAATCACTTACAATTTCTTGGTGA
TTCTGCAAATATAACCACATCACTACAGCATCATTCGATTTAATTTTTTG
GCTCCTCATTATTGATTAATTATTATTTTGGTTTAAAGTTTAactaattt
gatttaaaaaatgtaaatcaCATACCGTATATATTTTAGTTCAGTTTGGT
CTGCTGGTTTGTacataataaatatttttagaaaatcttgattcgatttc
ttgtctttgaaataaataattactaaaaata
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059805-exon-scaffold_331-1491911889:546120..547200 | TCONS_00059805-exon-scaffold_331-1491911889:546120..547200 | Clytia hemisphaerica | exon |
| TCONS_00059805-exon-scaffold_331-1510915933:546120..547200 | TCONS_00059805-exon-scaffold_331-1510915933:546120..547200 | Clytia hemisphaerica | exon |
| TCONS_00059805-exon-scaffold_331-1575043694:546120..547200 | TCONS_00059805-exon-scaffold_331-1575043694:546120..547200 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_331 | supercontig | scaffold_331:546120..547200 + |
Blast
The following BLAST results are available for this feature:
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