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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059761 ID=TCONS_00059761|Name=TCONS_00059761|organism=Clytia hemisphaerica|type=transcript|length=1459bp
TTACAAGATGaagtttagttttttcttttcaagataTTCTTAGTATTGTT
TATACAATAACAGAAACAAAAAACGGcatagaaattttaattttacatAA
TTTACAATATTATCATCTACATTATAAATACTTTGTTCAATATAATTTCT
CTATCTACAATaattttacaatatattttatacGAAAAATATGTCtcata
gcataatattttgtcTGTCGGAAAAATGGGTGAGCCAATGTTAGTTATTT
TGGATGAACAGCATATAATGACAAGGCCCGGTCAAATGCCTCGGTATCAG
AtgatttttcattgtatttccATCACAAGTCAAATCAATAATTCCAAAAG
GGCGGTTAGTATTTCATCACATTATTTAGAAGAATTGTTCAGAGCTTTGT
CACCTTCCAACAACAGTTTTAACAACCATTAAATGTTATTTGGACGACGT
AATTGTTTATACAATAGTATATGGATGACGTTCTATAATATAATGACATT
TTGTGCCGGTTGGTCTGTGGATAACTCCAGTCTCACGTGAGAAGATTGTT
GACTGATTGTTCAATCAGGAGAACATGGTGGAAGCTTCAAACTGGCTTCG
GATGTCCTTCACAACCTGTTTCCAGTCAACTTTCACTTTCTTGCACGAAC
ATGAAACAACTTTCTCGTAAAATTTGATTCGTTTCGCCTTGACACCATTT
CCAAGATCACATTGCATTTCCACAGCTCTCTTTTGTAAGTTCGGTATACA
AGCTGCTGAATAATGTAAATTTTGTCCGGGAATAAATACACTGCTGCACT
GTCCGTAACAAAGACCACGGTTAACGTTGATTGGTTCACATTTCGGAGAT
TTCAAAAGAAACATATTCTTCTTCATTTCACATCGGGTTGATTTCCACTG
GGTATACGGCACCAAAACTGTGGCCTCTTCGGCTTTGAGGGCGGGTCTTG
GACCCCGGAAGAGACTCCTGTTTGGTATTCCACGGAAAAAGTCATTCCTG
AAAAGTTGGTGTCGTTTGGTTTTCGGCCAACTATGAACTGTGATCGCACA
CAAAGTTAGAACGAGGATACGAGACATTGTAAATTCCATAATAGTTATCG
AATGTTGTTGATATAACTATGCTGataaaaatgttacttttcCGTATACC
AaagtaaaatttgtaaaaaagtatCTTCGAGCTTGATAGTGAGAGCCGCC
AACTGCTTTACTGTATAAATGTCAATTGATACATGTGTAGAGAAGCAAGC
ATCCTTAAGTAGGCTTTTGATTAATTGCGTTAATTAAGGAGGCACCATGA
TTGCGAGACGAAAGAGGAGAAGGAACACTCAACACAAAGAAAGAAATGCA
CAACAACAAACCATCGTGCTCTTCAAAAATACCGTTATACATTACGTATG
ATTATAATGAAACCATTATGTTCTTATGGCAGTCTTACTATTATATTAGA
ACATAAAAG Run BLAST on NCBI protein sequence of TCONS_00059761-protein >TCONS_00059761-protein ID=TCONS_00059761-protein|Name=TCONS_00059761-protein|organism=Clytia hemisphaerica|type=polypeptide|length=174bp
MEFTMSRILVLTLCAITVHSWPKTKRHQLFRNDFFRGIPNRSLFRGPRPA
LKAEEATVLVPYTQWKSTRCEMKKNMFLLKSPKCEPINVNRGLCYGQCSS
VFIPGQNLHYSAACIPNLQKRAVEMQCDLGNGVKAKRIKFYEKVVSCSCK
KVKVDWKQVVKDIRSQFEASTMFS Run BLAST on NCBI transcript from alignment at scaffold_330:93833..95291 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059761 ID=TCONS_00059761|Name=TCONS_00059761|organism=Clytia hemisphaerica|type=transcript|length=1459bp|location=Sequence derived from alignment at scaffold_330:93833..95291 (Clytia hemisphaerica)
CTTTTATGTTCTAATATAATAGTAAGACTGCCATAAGAACATAATGGTTT
CATTATAATCATACGTAATGTATAACGGTATTTTTGAAGAGCACGATGGT
TTGTTGTTGTGCATTTCTTTCTTTGTGTTGAGTGTTCCTTCTCCTCTTTC
GTCTCGCAATCATGGTGCCTCCTTAATTAACGCAATTAATCAAAAGCCTA
CTTAAGGATGCTTGCTTCTCTACACATGTATCAATTGACATTTATACAGT
AAAGCAGTTGGCGGCTCTCACTATCAAGCTCGAAGatacttttttacaaa
ttttacttTGGTATACGgaaaagtaacatttttatCAGCATAGTTATATC
AACAACATTCGATAACTATTATGGAATTTACAATGTCTCGTATCCTCGTT
CTAACTTTGTGTGCGATCACAGTTCATAGTTGGCCGAAAACCAAACGACA
CCAACTTTTCAGGAATGACTTTTTCCGTGGAATACCAAACAGGAGTCTCT
TCCGGGGTCCAAGACCCGCCCTCAAAGCCGAAGAGGCCACAGTTTTGGTG
CCGTATACCCAGTGGAAATCAACCCGATGTGAAATGAAGAAGAATATGTT
TCTTTTGAAATCTCCGAAATGTGAACCAATCAACGTTAACCGTGGTCTTT
GTTACGGACAGTGCAGCAGTGTATTTATTCCCGGACAAAATTTACATTAT
TCAGCAGCTTGTATACCGAACTTACAAAAGAGAGCTGTGGAAATGCAATG
TGATCTTGGAAATGGTGTCAAGGCGAAACGAATCAAATTTTACGAGAAAG
TTGTTTCATGTTCGTGCAAGAAAGTGAAAGTTGACTGGAAACAGGTTGTG
AAGGACATCCGAAGCCAGTTTGAAGCTTCCACCATGTTCTCCTGATTGAA
CAATCAGTCAACAATCTTCTCACGTGAGACTGGAGTTATCCACAGACCAA
CCGGCACAAAATGTCATTATATTATAGAACGTCATCCATATACTATTGTA
TAAACAATTACGTCGTCCAAATAACATTTAATGGTTGTTAAAACTGTTGT
TGGAAGGTGACAAAGCTCTGAACAATTCTTCTAAATAATGTGATGAAATA
CTAACCGCCCTTTTGGAATTATTGATTTGACTTGTGATggaaatacaatg
aaaaatcaTCTGATACCGAGGCATTTGACCGGGCCTTGTCATTATATGCT
GTTCATCCAAAATAACTAACATTGGCTCACCCATTTTTCCGACAgacaaa
atattatgctatgaGACATATTTTTCgtataaaatatattgtaaaattAT
TGTAGATAGAGAAATTATATTGAACAAAGTATTTATAATGTAGATGATAA
TATTGTAAATTatgtaaaattaaaatttctatgCCGTTTTTTGTTTCTGT
TATTGTATAAACAATACTAAGAAtatcttgaaaagaaaaaactaaacttC
ATCTTGTAA Coding sequence (CDS) from alignment at scaffold_330:93833..95291 >TCONS_00059761 ID=TCONS_00059761|Name=TCONS_00059761|organism=Clytia hemisphaerica|type=CDS|length=525bp|location=Sequence derived from alignment at scaffold_330:93833..95291 (Clytia hemisphaerica)
ATGGAATTTACAATGTCTCGTATCCTCGTTCTAACTTTGTGTGCGATCAC
AGTTCATAGTTGGCCGAAAACCAAACGACACCAACTTTTCAGGAATGACT
TTTTCCGTGGAATACCAAACAGGAGTCTCTTCCGGGGTCCAAGACCCGCC
CTCAAAGCCGAAGAGGCCACAGTTTTGGTGCCGTATACCCAGTGGAAATC
AACCCGATGTGAAATGAAGAAGAATATGTTTCTTTTGAAATCTCCGAAAT
GTGAACCAATCAACGTTAACCGTGGTCTTTGTTACGGACAGTGCAGCAGT
GTATTTATTCCCGGACAAAATTTACATTATTCAGCAGCTTGTATACCGAA
CTTACAAAAGAGAGCTGTGGAAATGCAATGTGATCTTGGAAATGGTGTCA
AGGCGAAACGAATCAAATTTTACGAGAAAGTTGTTTCATGTTCGTGCAAG
AAAGTGAAAGTTGACTGGAAACAGGTTGTGAAGGACATCCGAAGCCAGTT
TGAAGCTTCCACCATGTTCTCCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059761-exon-scaffold_330-1491911889:93833..95291 | TCONS_00059761-exon-scaffold_330-1491911889:93833..95291 | Clytia hemisphaerica | exon |
| TCONS_00059761-exon-scaffold_330-1510915933:93833..95291 | TCONS_00059761-exon-scaffold_330-1510915933:93833..95291 | Clytia hemisphaerica | exon |
| TCONS_00059761-exon-scaffold_330-1575043694:93833..95291 | TCONS_00059761-exon-scaffold_330-1575043694:93833..95291 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_330 | supercontig | scaffold_330:93833..95291 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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