TCONS_00059719 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059719
Unique NameTCONS_00059719
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1363

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059719 ID=TCONS_00059719|Name=TCONS_00059719|organism=Clytia hemisphaerica|type=transcript|length=1363bp
TAATTCTCCTTTTTCAATAAATAAGGAAAAGATATGATGGATAACAAAAA
TATAGAAGTCAGTCGTGTCATGTTACCGGATGATTCCAATCTTGCTGGTA
ATGTTCACGGTGGAAGTATTCTGAAATTGATCGAAGAAGCTGGCGAAATT
ATCGCAACAAGGCATTGCAATAAAAACAGACCAGGACCTGAATGTTACGC
AGCACTTGCAAGAGTAGAACGAACAGATTTCTTAGAACCAATGTTTGTTG
GCGAGATAGCGCAAATTCATGCTGAAGTCACTTATGCTTCTGGTCACTCT
CTTGAAGTTCAATGTACTGTTTACGCTGAGAATGTTGTAAAAGGCAATAG
AAGATTAACTAATAGAGCATCACTTTGGTACGTTCCATTGGCAATCGCTC
CACCTCACGCAGTGACTCTCGTGCCACCTTTGTCTTACAAGAGTACTCAG
GAAGAAGAGAAAGGAAAGAAACGTTATGAAGCTCAAAAAACATCAAGAAA
TCAAGCATCTGATTCTCTAAATATCGACGATGAAGCATCAGCTCCAGGAA
TGATCAATGTGTTGACACCAGCTGGTCGTAGTTTATGTGCACCTTATTCG
GTAAATTACTCACATTCATCGCTCATTGTTATGCTACACCCTTCAGAATG
CAATTCGTCTGGCTTTGCTTCTGGAGGTGCTACAATGAAGATGATGGATA
ATGTTGCAGGCATTGTTGCTACTAGACATTGTAAATCCATGACTGTCACA
GCTTCCGTTGAGGCGGTGAACTTCCACCATGTGGTGAAGATGGGGCACGT
CATGACCATCACAGGTCGTCCTGTGTTCAGCAGCAATCGTACACTAGATA
TCGAAGTTTTCGTCGATTGTGAAGATCTGGTCGAAGGAAAAAGTTTCCGT
GCGTGTTCGGCTACGTTCACGTTCGTTGCTTTGGATAAGGACAGACGTCC
TCAAATGATTCCAGAGTTGAAGGTGGAGACAGATATCGAAAAATTACGCG
CAGAACTTGGAAGAAAACGTTATTTAGCGAAGAAAGAACAACGTAAAAGA
AAAGCTGACGTAGCGAAGTTAGAGAAGCCGCCTTCTACTGAGAGACAAAT
GTCCATCAATTGAACATTAAATGAACAGTATTTGGACAACTCACTCTGAT
TTGACCATATTGGTTTATATATGCACAATAGGTAGAAAATAACATGTTGA
TTGATGATTAGTAGAGGGACAACACACACTTAATCTACATTCCTATTTTA
TGTTAGACCACTTTGCTCTCTTAATCCTTGACTGTTTCAACAGTCTATCG
CCATTCCATTTGCGTATTTTACGCCACATTCTCATTTCAAAGGAATAATG
AGCTTCTTTaaat
Run BLAST on NCBI

protein sequence of TCONS_00059719-protein

>TCONS_00059719-protein ID=TCONS_00059719-protein|Name=TCONS_00059719-protein|organism=Clytia hemisphaerica|type=polypeptide|length=359bp
MMDNKNIEVSRVMLPDDSNLAGNVHGGSILKLIEEAGEIIATRHCNKNRP
GPECYAALARVERTDFLEPMFVGEIAQIHAEVTYASGHSLEVQCTVYAEN
VVKGNRRLTNRASLWYVPLAIAPPHAVTLVPPLSYKSTQEEEKGKKRYEA
QKTSRNQASDSLNIDDEASAPGMINVLTPAGRSLCAPYSVNYSHSSLIVM
LHPSECNSSGFASGGATMKMMDNVAGIVATRHCKSMTVTASVEAVNFHHV
VKMGHVMTITGRPVFSSNRTLDIEVFVDCEDLVEGKSFRACSATFTFVAL
DKDRRPQMIPELKVETDIEKLRAELGRKRYLAKKEQRKRKADVAKLEKPP
STERQMSIN
Run BLAST on NCBI

transcript from alignment at scaffold_330:60075..63703-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059719 ID=TCONS_00059719|Name=TCONS_00059719|organism=Clytia hemisphaerica|type=transcript|length=3629bp|location=Sequence derived from alignment at scaffold_330:60075..63703- (Clytia hemisphaerica)
TAATTCTCCTTTTTCAATAAATAAGGAAAAGATATGATGGATAACAAAAA
TATAGAAGTCAGTCGTGTCATGTTACCGGATGATTCCAATCTTGCTGGTA
ATGTTCACGGTGGAAGTATTCTGAAATTGATCGAAGAAGCTGGCGAAATT
ATCGCAACAAGGCATTGCAATAAAAACAGACCAGGTTACTATACATTTCC
TCTTTGTTATGTTTATAAAATACACTGAGTTCATAATAAATGCTTGTTTT
GGCTTCAGCTGTGATATTACTTATAATCACATCACTTAAAATCTTTATCA
CATATTAACTTCATGAAAAGGCCAGTTTAAAAGTAATTCATGAAATTTGA
TGGTTTTATTTCTCAATCTACATTTGCCTCCTTCAACCCCAGGTTTTGAG
TTAATTTACTTTTCTTCTACTCTGAGCTAAAATTAATCATCAGATTTTTT
TTAATTTTCTTCAGGACCTGAATGTTACGCAGCACTTGCAAGAGTAGAAC
GAACAGATTTCTTAGAACCAATGTTTGTTGGCGAGATAGCGCAAATTCAT
GCTGAAGTCACTTATGCTTCTGGTCACTCTCTTGAAGTTCAATGTACTGT
TTACGCTGAGAATGTTGTAAAAGGCAATAGAAGATTAACTAATAGGTAAC
CAAGACTCCAAATCACAAGTTGGCTTGTTCATTTTTGCATTTTCCTGTTT
TTTTTTGTCTACATACTTTCAATAAAGGGAGGGCCATCCTTCATCTATCC
CTAATATTTATCTTTATGTCATATTAGTAGACATTTGACAATTTTTGAAG
ATGTTTGTTGTCTACCAAGCTCATATACTTGCTTTCAACGCTAAATAATA
GATTACTTTAATCAGATTAACTAAGCGATTTCATGATTTTTTGCCATTTT
CACGAAATTAAAACTCACGAAAACGTGAGATTTTTATCCACCACTAAGAG
AAACCTGCCCAAAGTCTCCATTTGTGGCAAAAAAGGCTATTTTTCACCTG
TTTTCAGGCTTATTCGCAAAATTAAATCCATGCAAAATTTTTCACAACTC
AGGGTTTTAAATCCAGAAAACTTCGCGATTCTTTTTGATTAAAGTAAATA
AGTTATCTTTTTAATATAGAGCATCACTTTGGTACGTTCCATTGGCAATC
GCTCCACCTCACGCAGTGACTCTCGTGCCACCTTTGTCTTACAAGAGTAC
TCAGGAAGAAGAGAAAGGAAAGAAACGTTATGAAGCTCAAAAAACATCAA
GAAATCAAGCATCTGATTCTCTAAATGTAAGAAATTAATTTCTGGTATTG
TATGTTAATTATGAAATCTCAAATTGTTTGATCAAGATATCTTATGTATG
CTTTATGTGAAAACGAGCCACCAGTTTGCCTTTCCTCTTTACGATGAAAT
GAAAATTAAGAAACTGTTAGATCAATATTATTAACAACATTGATGGCATA
GTCAGCAATTAAATGGATAATCAGATGGTTTGTAATATTTGGCATGTGGG
ATCCTTCTATTATCCTGAGCAAAATCTCAAAATATTTTTGCCTAACTATT
TTCAGTCGAGATATTTAAGTTACAAGTTTTTGGCTTTTAGGATGAAAACA
ATAGAATTTCAACGTAAGAACCGTGTAAGAACCCATTTTCAAAAATTTCA
AATTTTGATANGGGGGAAATTGTTACATAAATATACTTTGAGGTTTTACT
AAGGATCACAGAATGTTTCTGTAATCTAAATATCTCAAACCATCTGATTA
TCCCTTTTACTCTCAGCATTTAAATTGGATATGATAACCAACCATTTATA
GCTGGAAAAATTGTTACACAAAAATACTTTGAGGTTTTACTAAGGATCAC
AGAATGTTTCTGTAATCTAAATATCTCAAACCATCTGATTATCCCTTTAA
ATTTCTATACTTGTTTATTATCCACAGAGTAAGGTCAAATAATATTTCTT
TTAACTGTGACTTTAGATCGACGATGAAGCATCAGCTCCAGGAATGATCA
ATGTGTTGACACCAGCTGGTCGTAGTTTATGTGCACCTTATTCGGTAAAT
TACTCACATTCATCGCTCATTGTTATGCTACACCCTTCAGAATGCAATTC
GTCTGGCTTTGCTTCTGGAGGTGCTACAATGAAGATGATGGATAATGTTG
CAGGCATTGTTGCTACTAGACATTGTAAATCCATGACTGTCACAGCTTCC
GTTGGTAAGTCATGTGTTTTCTCTGCACCAATTAATGGCCTGATCAATTC
ATCATTCATCAACCAATGTATTCACAATAGACAACTCCCAGCAGAAAAAA
GGGAAACGAAAAGAATAATAACATTAAGGGTTTGATTTTCTCATCTGCAT
TATTTATGAAAAATAATTTTCGTCGACATAAATTCAACGACTCTTCATGA
CATAGGTGTCAGAAAATTAAGGCCAAATATGTTTTATGGGTAAACGTAAA
CCTCGTGATCCAAGCCACGGTAAACTTCTAATATGAAGTGAAGTATTGAC
TGATCTTACGTCACTTACAACCAATCAGCTATTAGGCCCGTGATGTAATA
TCAGAAGACATTGCAATGTATATCGTGAACAGACATGAGTGTTTTCCTGA
TTCCCCTGGTAGCGTCTCAATTTGTGATATTCCACTTGAAACTTTCATTG
CAGAGGCGGTGAACTTCCACCATGTGGTGAAGATGGGGCACGTCATGACC
ATCACAGGTCGTCCTGTGTTCAGCAGCAATCGTACACTAGATATCGAAGT
TTTCGTCGATTGTGAAGATCTGGTCGAAGGTTAGTCTTTTTACAATCTTT
TTGTCACGTTGCTTTCCATATTCATTGAAACAAATTGATTCTTTCAGTAT
CCAAACTAATTTTTACCCATTTTTACATCTTTAAAATAACTTATTTGTAC
TAAGAGAAAACGAAAAAGCAAAACAGTTTTCCGGTTTACTTTATCAAATT
AAAATTTATTTAGAAAACGCCATATTCTTTTAAATGCTCCCCTCGATCAA
ATGCCCTTCTTAAAATCCAAAAATTTAATAGACGCCCGGGGCGTTTAGAT
AACCAAATTATTTTATTGATACTGAATTATGTTGCGAAGTACATTGCCTC
GACATATTATGAATAGATTCATTTTACAATGTTTGATTTATTTAATAATC
AGGAAAAAGTTTCCGTGCGTGTTCGGCTACGTTCACGTTCGTTGCTTTGG
ATAAGGACAGACGTCCTCAAATGATTCCAGAGTTGAAGGTGGAGACAGAT
ATCGAAAAATTACGCGCAGAACTTGGAAGAAAACGTTATTTAGCGAAGAA
AGAACAACGTAAAAGAAAAGCTGACGTAGCGAAGTTAGAGAAGCCGCCTT
CTACTGAGAGACAAATGTCCATCAATTGAACATTAAATGAACAGTATTTG
GACAACTCACTCTGATTTGACCATATTGGTTTATATATGCACAATAGGTA
GAAAATAACATGTTGATTGATGATTAGTAGAGGGACAACACACACTTAAT
CTACATTCCTATTTTATGTTAGACCACTTTGCTCTCTTAATCCTTGACTG
TTTCAACAGTCTATCGCCATTCCATTTGCGTATTTTACGCCACATTCTCA
TTTCAAAGGAATAATGAGCTTCTTTAAAT

Coding sequence (CDS) from alignment at scaffold_330:60075..63703-

>TCONS_00059719 ID=TCONS_00059719|Name=TCONS_00059719|organism=Clytia hemisphaerica|type=CDS|length=6480bp|location=Sequence derived from alignment at scaffold_330:60075..63703- (Clytia hemisphaerica)
GAAAAAGTTTCCGTGCGTGTTCGGCTACGTTCACGTTCGTTGCTTTGGAT
AAGGACAGACGTCCTCAAATGATTCCAGAGTTGAAGGTGGAGACAGATAT
CGAAAAATTACGCGCAGAACTTGGAAGAAAACGTTATTTAGCGAAGAAAG
AACAACGTAAAAGAAAAGCTGACGTAGCGAAGTTAGAGAAGCCGCCTTCT
ACTGAGAGACAAATGTCCATCAATTGAAGGCGGTGAACTTCCACCATGTG
GTGAAGATGGGGCACGTCATGACCATCACAGGTCGTCCTGTGTTCAGCAG
CAATCGTACACTAGATATCGAAGTTTTCGTCGATTGTGAAGATCTGGTCG
AAGATCGACGATGAAGCATCAGCTCCAGGAATGATCAATGTGTTGACACC
AGCTGGTCGTAGTTTATGTGCACCTTATTCGGTAAATTACTCACATTCAT
CGCTCATTGTTATGCTACACCCTTCAGAATGCAATTCGTCTGGCTTTGCT
TCTGGAGGTGCTACAATGAAGATGATGGATAATGTTGCAGGCATTGTTGC
TACTAGACATTGTAAATCCATGACTGTCACAGCTTCCGTTGAGCATCACT
TTGGTACGTTCCATTGGCAATCGCTCCACCTCACGCAGTGACTCTCGTGC
CACCTTTGTCTTACAAGAGTACTCAGGAAGAAGAGAAAGGAAAGAAACGT
TATGAAGCTCAAAAAACATCAAGAAATCAAGCATCTGATTCTCTAAATGA
CCTGAATGTTACGCAGCACTTGCAAGAGTAGAACGAACAGATTTCTTAGA
ACCAATGTTTGTTGGCGAGATAGCGCAAATTCATGCTGAAGTCACTTATG
CTTCTGGTCACTCTCTTGAAGTTCAATGTACTGTTTACGCTGAGAATGTT
GTAAAAGGCAATAGAAGATTAACTAATAGATGATGGATAACAAAAATATA
GAAGTCAGTCGTGTCATGTTACCGGATGATTCCAATCTTGCTGGTAATGT
TCACGGTGGAAGTATTCTGAAATTGATCGAAGAAGCTGGCGAAATTATCG
CAACAAGGCATTGCAATAAAAACAGACCAGGAAAAAGTTTCCGTGCGTGT
TCGGCTACGTTCACGTTCGTTGCTTTGGATAAGGACAGACGTCCTCAAAT
GATTCCAGAGTTGAAGGTGGAGACAGATATCGAAAAATTACGCGCAGAAC
TTGGAAGAAAACGTTATTTAGCGAAGAAAGAACAACGTAAAAGAAAAGCT
GACGTAGCGAAGTTAGAGAAGCCGCCTTCTACTGAGAGACAAATGTCCAT
CAATTGAAGGCGGTGAACTTCCACCATGTGGTGAAGATGGGGCACGTCAT
GACCATCACAGGTCGTCCTGTGTTCAGCAGCAATCGTACACTAGATATCG
AAGTTTTCGTCGATTGTGAAGATCTGGTCGAAGATCGACGATGAAGCATC
AGCTCCAGGAATGATCAATGTGTTGACACCAGCTGGTCGTAGTTTATGTG
CACCTTATTCGGTAAATTACTCACATTCATCGCTCATTGTTATGCTACAC
CCTTCAGAATGCAATTCGTCTGGCTTTGCTTCTGGAGGTGCTACAATGAA
GATGATGGATAATGTTGCAGGCATTGTTGCTACTAGACATTGTAAATCCA
TGACTGTCACAGCTTCCGTTGAGCATCACTTTGGTACGTTCCATTGGCAA
TCGCTCCACCTCACGCAGTGACTCTCGTGCCACCTTTGTCTTACAAGAGT
ACTCAGGAAGAAGAGAAAGGAAAGAAACGTTATGAAGCTCAAAAAACATC
AAGAAATCAAGCATCTGATTCTCTAAATGACCTGAATGTTACGCAGCACT
TGCAAGAGTAGAACGAACAGATTTCTTAGAACCAATGTTTGTTGGCGAGA
TAGCGCAAATTCATGCTGAAGTCACTTATGCTTCTGGTCACTCTCTTGAA
GTTCAATGTACTGTTTACGCTGAGAATGTTGTAAAAGGCAATAGAAGATT
AACTAATAGATGATGGATAACAAAAATATAGAAGTCAGTCGTGTCATGTT
ACCGGATGATTCCAATCTTGCTGGTAATGTTCACGGTGGAAGTATTCTGA
AATTGATCGAAGAAGCTGGCGAAATTATCGCAACAAGGCATTGCAATAAA
AACAGACCAGGAAAAAGTTTCCGTGCGTGTTCGGCTACGTTCACGTTCGT
TGCTTTGGATAAGGACAGACGTCCTCAAATGATTCCAGAGTTGAAGGTGG
AGACAGATATCGAAAAATTACGCGCAGAACTTGGAAGAAAACGTTATTTA
GCGAAGAAAGAACAACGTAAAAGAAAAGCTGACGTAGCGAAGTTAGAGAA
GCCGCCTTCTACTGAGAGACAAATGTCCATCAATTGAAGGCGGTGAACTT
CCACCATGTGGTGAAGATGGGGCACGTCATGACCATCACAGGTCGTCCTG
TGTTCAGCAGCAATCGTACACTAGATATCGAAGTTTTCGTCGATTGTGAA
GATCTGGTCGAAGATCGACGATGAAGCATCAGCTCCAGGAATGATCAATG
TGTTGACACCAGCTGGTCGTAGTTTATGTGCACCTTATTCGGTAAATTAC
TCACATTCATCGCTCATTGTTATGCTACACCCTTCAGAATGCAATTCGTC
TGGCTTTGCTTCTGGAGGTGCTACAATGAAGATGATGGATAATGTTGCAG
GCATTGTTGCTACTAGACATTGTAAATCCATGACTGTCACAGCTTCCGTT
GAGCATCACTTTGGTACGTTCCATTGGCAATCGCTCCACCTCACGCAGTG
ACTCTCGTGCCACCTTTGTCTTACAAGAGTACTCAGGAAGAAGAGAAAGG
AAAGAAACGTTATGAAGCTCAAAAAACATCAAGAAATCAAGCATCTGATT
CTCTAAATGACCTGAATGTTACGCAGCACTTGCAAGAGTAGAACGAACAG
ATTTCTTAGAACCAATGTTTGTTGGCGAGATAGCGCAAATTCATGCTGAA
GTCACTTATGCTTCTGGTCACTCTCTTGAAGTTCAATGTACTGTTTACGC
TGAGAATGTTGTAAAAGGCAATAGAAGATTAACTAATAGATGATGGATAA
CAAAAATATAGAAGTCAGTCGTGTCATGTTACCGGATGATTCCAATCTTG
CTGGTAATGTTCACGGTGGAAGTATTCTGAAATTGATCGAAGAAGCTGGC
GAAATTATCGCAACAAGGCATTGCAATAAAAACAGACCAGGAAAAAGTTT
CCGTGCGTGTTCGGCTACGTTCACGTTCGTTGCTTTGGATAAGGACAGAC
GTCCTCAAATGATTCCAGAGTTGAAGGTGGAGACAGATATCGAAAAATTA
CGCGCAGAACTTGGAAGAAAACGTTATTTAGCGAAGAAAGAACAACGTAA
AAGAAAAGCTGACGTAGCGAAGTTAGAGAAGCCGCCTTCTACTGAGAGAC
AAATGTCCATCAATTGAAGGCGGTGAACTTCCACCATGTGGTGAAGATGG
GGCACGTCATGACCATCACAGGTCGTCCTGTGTTCAGCAGCAATCGTACA
CTAGATATCGAAGTTTTCGTCGATTGTGAAGATCTGGTCGAAGATCGACG
ATGAAGCATCAGCTCCAGGAATGATCAATGTGTTGACACCAGCTGGTCGT
AGTTTATGTGCACCTTATTCGGTAAATTACTCACATTCATCGCTCATTGT
TATGCTACACCCTTCAGAATGCAATTCGTCTGGCTTTGCTTCTGGAGGTG
CTACAATGAAGATGATGGATAATGTTGCAGGCATTGTTGCTACTAGACAT
TGTAAATCCATGACTGTCACAGCTTCCGTTGAGCATCACTTTGGTACGTT
CCATTGGCAATCGCTCCACCTCACGCAGTGACTCTCGTGCCACCTTTGTC
TTACAAGAGTACTCAGGAAGAAGAGAAAGGAAAGAAACGTTATGAAGCTC
AAAAAACATCAAGAAATCAAGCATCTGATTCTCTAAATGACCTGAATGTT
ACGCAGCACTTGCAAGAGTAGAACGAACAGATTTCTTAGAACCAATGTTT
GTTGGCGAGATAGCGCAAATTCATGCTGAAGTCACTTATGCTTCTGGTCA
CTCTCTTGAAGTTCAATGTACTGTTTACGCTGAGAATGTTGTAAAAGGCA
ATAGAAGATTAACTAATAGATGATGGATAACAAAAATATAGAAGTCAGTC
GTGTCATGTTACCGGATGATTCCAATCTTGCTGGTAATGTTCACGGTGGA
AGTATTCTGAAATTGATCGAAGAAGCTGGCGAAATTATCGCAACAAGGCA
TTGCAATAAAAACAGACCAGGAAAAAGTTTCCGTGCGTGTTCGGCTACGT
TCACGTTCGTTGCTTTGGATAAGGACAGACGTCCTCAAATGATTCCAGAG
TTGAAGGTGGAGACAGATATCGAAAAATTACGCGCAGAACTTGGAAGAAA
ACGTTATTTAGCGAAGAAAGAACAACGTAAAAGAAAAGCTGACGTAGCGA
AGTTAGAGAAGCCGCCTTCTACTGAGAGACAAATGTCCATCAATTGAAGG
CGGTGAACTTCCACCATGTGGTGAAGATGGGGCACGTCATGACCATCACA
GGTCGTCCTGTGTTCAGCAGCAATCGTACACTAGATATCGAAGTTTTCGT
CGATTGTGAAGATCTGGTCGAAGATCGACGATGAAGCATCAGCTCCAGGA
ATGATCAATGTGTTGACACCAGCTGGTCGTAGTTTATGTGCACCTTATTC
GGTAAATTACTCACATTCATCGCTCATTGTTATGCTACACCCTTCAGAAT
GCAATTCGTCTGGCTTTGCTTCTGGAGGTGCTACAATGAAGATGATGGAT
AATGTTGCAGGCATTGTTGCTACTAGACATTGTAAATCCATGACTGTCAC
AGCTTCCGTTGAGCATCACTTTGGTACGTTCCATTGGCAATCGCTCCACC
TCACGCAGTGACTCTCGTGCCACCTTTGTCTTACAAGAGTACTCAGGAAG
AAGAGAAAGGAAAGAAACGTTATGAAGCTCAAAAAACATCAAGAAATCAA
GCATCTGATTCTCTAAATGACCTGAATGTTACGCAGCACTTGCAAGAGTA
GAACGAACAGATTTCTTAGAACCAATGTTTGTTGGCGAGATAGCGCAAAT
TCATGCTGAAGTCACTTATGCTTCTGGTCACTCTCTTGAAGTTCAATGTA
CTGTTTACGCTGAGAATGTTGTAAAAGGCAATAGAAGATTAACTAATAGA
TGATGGATAACAAAAATATAGAAGTCAGTCGTGTCATGTTACCGGATGAT
TCCAATCTTGCTGGTAATGTTCACGGTGGAAGTATTCTGAAATTGATCGA
AGAAGCTGGCGAAATTATCGCAACAAGGCATTGCAATAAAAACAGACCAG
GAAAAAGTTTCCGTGCGTGTTCGGCTACGTTCACGTTCGTTGCTTTGGAT
AAGGACAGACGTCCTCAAATGATTCCAGAGTTGAAGGTGGAGACAGATAT
CGAAAAATTACGCGCAGAACTTGGAAGAAAACGTTATTTAGCGAAGAAAG
AACAACGTAAAAGAAAAGCTGACGTAGCGAAGTTAGAGAAGCCGCCTTCT
ACTGAGAGACAAATGTCCATCAATTGAAGGCGGTGAACTTCCACCATGTG
GTGAAGATGGGGCACGTCATGACCATCACAGGTCGTCCTGTGTTCAGCAG
CAATCGTACACTAGATATCGAAGTTTTCGTCGATTGTGAAGATCTGGTCG
AAGATCGACGATGAAGCATCAGCTCCAGGAATGATCAATGTGTTGACACC
AGCTGGTCGTAGTTTATGTGCACCTTATTCGGTAAATTACTCACATTCAT
CGCTCATTGTTATGCTACACCCTTCAGAATGCAATTCGTCTGGCTTTGCT
TCTGGAGGTGCTACAATGAAGATGATGGATAATGTTGCAGGCATTGTTGC
TACTAGACATTGTAAATCCATGACTGTCACAGCTTCCGTTGAGCATCACT
TTGGTACGTTCCATTGGCAATCGCTCCACCTCACGCAGTGACTCTCGTGC
CACCTTTGTCTTACAAGAGTACTCAGGAAGAAGAGAAAGGAAAGAAACGT
TATGAAGCTCAAAAAACATCAAGAAATCAAGCATCTGATTCTCTAAATGA
CCTGAATGTTACGCAGCACTTGCAAGAGTAGAACGAACAGATTTCTTAGA
ACCAATGTTTGTTGGCGAGATAGCGCAAATTCATGCTGAAGTCACTTATG
CTTCTGGTCACTCTCTTGAAGTTCAATGTACTGTTTACGCTGAGAATGTT
GTAAAAGGCAATAGAAGATTAACTAATAGATGATGGATAACAAAAATATA
GAAGTCAGTCGTGTCATGTTACCGGATGATTCCAATCTTGCTGGTAATGT
TCACGGTGGAAGTATTCTGAAATTGATCGAAGAAGCTGGCGAAATTATCG
CAACAAGGCATTGCAATAAAAACAGACCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037565XLOC_037565Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059719-proteinTCONS_00059719-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059719-exon-scaffold_330-1575043694:63520..63703TCONS_00059719-exon-scaffold_330-1575043694:63520..63703Clytia hemisphaericaexon
TCONS_00059719-exon-scaffold_330-1575043694:63059..63239TCONS_00059719-exon-scaffold_330-1575043694:63059..63239Clytia hemisphaericaexon
TCONS_00059719-exon-scaffold_330-1575043694:62428..62584TCONS_00059719-exon-scaffold_330-1575043694:62428..62584Clytia hemisphaericaexon
TCONS_00059719-exon-scaffold_330-1575043694:61500..61737TCONS_00059719-exon-scaffold_330-1575043694:61500..61737Clytia hemisphaericaexon
TCONS_00059719-exon-scaffold_330-1575043694:60925..61050TCONS_00059719-exon-scaffold_330-1575043694:60925..61050Clytia hemisphaericaexon
TCONS_00059719-exon-scaffold_330-1575043694:60075..60551TCONS_00059719-exon-scaffold_330-1575043694:60075..60551Clytia hemisphaericaexon
TCONS_00059719-exon-scaffold_330-1510915933:63520..63703TCONS_00059719-exon-scaffold_330-1510915933:63520..63703Clytia hemisphaericaexon
TCONS_00059719-exon-scaffold_330-1510915933:63059..63239TCONS_00059719-exon-scaffold_330-1510915933:63059..63239Clytia hemisphaericaexon
TCONS_00059719-exon-scaffold_330-1510915933:62428..62584TCONS_00059719-exon-scaffold_330-1510915933:62428..62584Clytia hemisphaericaexon
TCONS_00059719-exon-scaffold_330-1510915933:61500..61737TCONS_00059719-exon-scaffold_330-1510915933:61500..61737Clytia hemisphaericaexon
TCONS_00059719-exon-scaffold_330-1510915933:60925..61050TCONS_00059719-exon-scaffold_330-1510915933:60925..61050Clytia hemisphaericaexon
TCONS_00059719-exon-scaffold_330-1510915933:60075..60551TCONS_00059719-exon-scaffold_330-1510915933:60075..60551Clytia hemisphaericaexon
TCONS_00059719-exon-scaffold_330-1491911889:63520..63703TCONS_00059719-exon-scaffold_330-1491911889:63520..63703Clytia hemisphaericaexon
TCONS_00059719-exon-scaffold_330-1491911889:63059..63239TCONS_00059719-exon-scaffold_330-1491911889:63059..63239Clytia hemisphaericaexon
TCONS_00059719-exon-scaffold_330-1491911889:62428..62584TCONS_00059719-exon-scaffold_330-1491911889:62428..62584Clytia hemisphaericaexon
TCONS_00059719-exon-scaffold_330-1491911889:61500..61737TCONS_00059719-exon-scaffold_330-1491911889:61500..61737Clytia hemisphaericaexon
TCONS_00059719-exon-scaffold_330-1491911889:60925..61050TCONS_00059719-exon-scaffold_330-1491911889:60925..61050Clytia hemisphaericaexon
TCONS_00059719-exon-scaffold_330-1491911889:60075..60551TCONS_00059719-exon-scaffold_330-1491911889:60075..60551Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_330supercontigscaffold_330:60075..63703 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.27163	6.41562	11.9047	15.5633	402.277	317.393	89.5249	98.7244	58.1348	63.4414	41.6748	31.8998	27.5822	24.2065	24.6494	27.2768	46.827	41.5147	13.4972	23.2889	23.9281	24.8794	16.9551	19.6128	22.3792	26.1887	40.0895	25.3289	23.4764	23.2929
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006683Thioestr_dom
IPR033120HOTDOG_ACOT
IPR029069HotDog_dom
Blast
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BLAST of TCONS_00059719 vs. Swiss-Prot (Human)
Match: BACH (Cytosolic acyl coenzyme A thioester hydrolase OS=Homo sapiens GN=ACOT7 PE=1 SV=3)

HSP 1 Score: 331.643 bits (849), Expect = 4.012e-109
Identity = 170/334 (50.90%), Postives = 231/334 (69.16%), Query Frame = 1 
Query:   64 RVMLPDDSNLAGNVHGGSILKLIEEAGEIIATRHCNKNRPGPECYAALARVERTDFLEPMFVGEIAQIHAEVTYASGHSLEVQCTVYAENVVKGNRRLTNRASLWYVPLAIAPPHAVTLVPPLSYKSTQEEEKGKKRYEAQKTSRNQASDSLNIDDEASAPGMINVLTPAGRSLCAPYSVNYSHSSLIVMLHPSECNSSGFASGGATMKMMDNVAGIVATRHCKSMTVTASVEAVNFHHVVKMGHVMTITGRPVFSSNRTLDIEVFVDCEDLVEG--KSFRACSATFTFVALDKDRRPQMIPELKVETDIEKLRAELGRKRYLAKKEQRKRKAD 1059
            R+M PDD+N+AGNVHGG+ILK+IEEAG II+TRHCN    G  C AALARVERTDFL PM +GE+A + AE+TY S HS+EVQ  V +EN++ G ++LTN+A+LWYVPL++     V  VPP+ Y   ++EE+G+KRYEAQK  R +       + +   P    VL P       P +V+YS SSLI ++ PS+C   GF  GG TMK+MD VAGIVA RHCK+  VTASV+A+NFH  ++ G V+TI+GR  F+SN++++IEV VD + +V+   K +RA SA FT+V+L ++ R   +P+L  ET+ EK R E G+ RYL  K +R+  A+
Sbjct:   58 RIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQN-GERCVAALARVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWR---NGDIVQP----VLNP------EPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQMKAKRQGHAE 377
The following BLAST results are available for this feature:
BLAST of TCONS_00059719 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BACH4.012e-10950.90Cytosolic acyl coenzyme A thioester hydrolase OS=H... [more]
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