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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054684 ID=TCONS_00054684|Name=TCONS_00054684|organism=Clytia hemisphaerica|type=transcript|length=1113bp
aacaaatttgttgtcaaagagatttaacagttaTGCGAGTTATAtaatga
aaatacaggccagatatcataCGGTTCCATGTTTCAACCAaccgtcccaa
gttggagcagttgacggtacttacaaaaaattaaaaacactttATAGAAA
TCTGCTCTTGGATATAGCATTTTCTGTTtcaaatttcaacatttctatGT
CTGCAAACCTCGgaaattaaacttttaaagGCCAGACTGCCTCAGAAATT
TTACTCTTTACGGGCTGGGTAGGTCAGAAATTCTGTTATAactttaaaat
tcaaatcacCTCGGAATTTCCATGTCGCTGGGCCCCATTGAACTCAATTG
AgggacaaattctggaatggcccaatgtatGCCATTAAAAAATCCACAAA
AGAAAAGACAGACTATACACaccaaacttttcaaaacacgcaattaattg
aaagcagtaattatgacgtcatactTTCTTCCTGTGCAAGAAAACATAAA
CCCACGTTTTGATATACAAAGTCCAGTGTAACACATTCAGTTAATGGAAG
TACCTCAATTATtagcatgttcaaagttcacaataacaacttttttttat
tacgGAAACCAAACGACAAGTGAGAAAgagtcataaaactaaaagtcagc
gctcCGTGGATGTAAGGTATATAGTTTATGAAATTGTTAAGATAAAAATG
ACatactttttaacaacttttttctttgaagcCTCCTCGTAGGAGAATGT
GTCTTTCTATGAGGAATTTTATAGCAGATTAAAAAGACTATCAGAAAACG
Aaagcttcttcatttttcattttcgcatttatggggaagaatgaaatttt
cggaagatgctttattcgatatgaggattcccatttTTGTAAGATGGCAA
TTCCCCATGGTTGCAAAATGgtggctatgggtaattcctttgttcttttg
ctatttattttcttttgttctatgtgaTGGTAAAGGCGCTTCACAAATCG
AAGTACTTCCgcttttttctatttctttattaCCTACCTTTGTACCTCTT
TTTGGCTTTTGCTTGAACAGCTCATCCAACTCGTTGAGTCCGATGCTTCG
ACATTTCCTTGAG Run BLAST on NCBI transcript from alignment at scaffold_243:362108..363220 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054684 ID=TCONS_00054684|Name=TCONS_00054684|organism=Clytia hemisphaerica|type=transcript|length=1113bp|location=Sequence derived from alignment at scaffold_243:362108..363220 (Clytia hemisphaerica)
CTCAAGGAAATGTCGAAGCATCGGACTCAACGAGTTGGATGAGCTGTTCA
AGCAAAAGCCAAAAAGAGGTACAAAGGTAGGtaataaagaaatagaaaaa
agcGGAAGTACTTCGATTTGTGAAGCGCCTTTACCAtcacatagaacaaa
agaaaataaatagcaaaagaacaaaggaattacccatagccacCATTTTG
CAACCATGGGGAATTGCCATCTTACAAaaatgggaatcctcatatcgaat
aaagcatcttccgaaaatttcattcttccccataaatgcgaaaatgaaaa
atgaagaagcttTCGTTTTCTGATAGTCTTTTTAATCTGCTATAAAATTC
CTCATAGAAAGACACATTCTCCTACGAGGAGgcttcaaagaaaaaagttg
ttaaaaagtatGTCATTTTTATCTTAACAATTTCATAAACTATATACCTT
ACATCCACGgagcgctgacttttagttttatgactcTTTCTCACTTGTCG
TTTGGTTTCcgtaataaaaaaaagttgttattgtgaactttgaacatgct
aATAATTGAGGTACTTCCATTAACTGAATGTGTTACACTGGACTTTGTAT
ATCAAAACGTGGGTTTATGTTTTCTTGCACAGGAAGAAagtatgacgtca
taattactgctttcaattaattgcgtgttttgaaaagtttggtGTGTATA
GTCTGTCTTTTCTTTTGTGGATTTTTTAATGGCatacattgggccattcc
agaatttgtcccTCAATTGAGTTCAATGGGGCCCAGCGACATGGAAATTC
CGAGgtgatttgaattttaaagtTATAACAGAATTTCTGACCTACCCAGC
CCGTAAAGAGTAAAATTTCTGAGGCAGTCTGGCctttaaaagtttaattt
cCGAGGTTTGCAGACatagaaatgttgaaatttgaAACAGAAAATGCTAT
ATCCAAGAGCAGATTTCTATaaagtgtttttaattttttgtaagtaccgt
caactgctccaacttgggacggtTGGTTGAAACATGGAACCGtatgatat
ctggcctgtattttcattaTATAACTCGCAtaactgttaaatctctttga
caacaaatttgtt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054684-exon-scaffold_243-1491911889:362108..363220 | TCONS_00054684-exon-scaffold_243-1491911889:362108..363220 | Clytia hemisphaerica | exon |
| TCONS_00054684-exon-scaffold_243-1510915933:362108..363220 | TCONS_00054684-exon-scaffold_243-1510915933:362108..363220 | Clytia hemisphaerica | exon |
| TCONS_00054684-exon-scaffold_243-1575043694:362108..363220 | TCONS_00054684-exon-scaffold_243-1575043694:362108..363220 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_243 | supercontig | scaffold_243:362108..363220 . |
Blast
The following BLAST results are available for this feature:
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