TCONS_00054178 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054178
Unique NameTCONS_00054178
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2529

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054178 ID=TCONS_00054178|Name=TCONS_00054178|organism=Clytia hemisphaerica|type=transcript|length=2529bp
CCGCTAGCGTGATTTTTCATCCATGTGCTAAACCAAGTTCTTTTACAAAT
ATTGCTGAACGGCTTGCTGTTGGAGGGAATCTTTGGTGTGTAATTTGCTC
TAAATTGCTcttaaattcaagaaaatacaaaaatggtCAAAGCAAAGACA
AAAACAATAAAGGCAGAGGAAATTCCAAAATCCAAGAAAGCTAAAAAAGT
TGAAACTGACTCTGACTCGTCATCTGAAGAAGAGGAAGAAGTCAAAGTCG
CACCAAAGAAGAATGGAAAAGTCAATGGTACAACCAAAAAGCCTGTCAAA
AAAGAAAGTTCATCAGAAGACAGTGACAGTAGTGAAGAAGAAGCCAAACC
AGCAAAGAAAAATGGAGTAGCAAATGGAAAAGCTAATGGGAAGAAAGCAC
CAGCTAAGAAAGAATCAAGCTCGGAAGAAGATAGCAGTGATGAAGAGGAA
GAAAAACCAAAAGCTAAAGCAAAAGCTCCAGCTAAGAAAGTAGCAGCAAA
GAAAGAATCAAGCTCAGAAGAAGACAGTAGTGATGAAGAGGAAGAAAAAC
CAAAAGCTAAACCTGCCCCAGCTAAGAAAGTAGCAGCAAAGAAAGAATCA
AGCTCAGAAGAAGACAGTGATGATGAAGAGGAAGAAAAACCTAAAGCTAA
AGCAAAAGCTCCTGCCAAAAAGAAAGCTGATTCCAGCTCTGAAGCAGAAA
GTTCAGAAGAAGAGGAAGAGAAACCTGCGAAAAAAGCACCAAAACGAAAG
AAGGATTCCTCATCTGAAGATGAAAGTGAAGAAGAGGAACAGCCCAAAAA
ACaaaaagaagaaaagaaaaatttgaaacgtAAAGCAGACGATTTGGGAG
ATGTCAATACACCAAAGAAAGTAAAGGAAGCAACTTCTCTTTTCATTGGT
GGTTTATCATACTACACAACTGAAGATGGACTTCGACAATTTTTCGCAGA
TAACGAAATTAATCTTACTAATTGCCGTATTATTACTGATCGTGAAACAG
GAAAATCAAGAGGATTTGGATACGCTGATTTTGACAGCCAAGAAGAAGCA
GATAAATGTTATAAAATTGAGGACACTACTTTAGACGAACGTCAATTACG
CTTTGATGCCTCTAATAGTGGAGCTAAAACGCCGGGTAGTGGTCGTGGTG
GACGTGGAGACCGCAGAGGTGGTGGTTTCTCAGCTAATCGCAGTGGTGGT
CGTGGCGGCCGCGGAGGATTCAACCGAGATAACGAAACCCCAACAAAATT
ATTACTTGTGAAAAATCTCTCATATGACACTTATAATGAATCTTTGATGA
GTAAATTTAGTGGCGCTAATGATGCTCGAGTTGTTAAAGACCAAGATGGA
AATTCTAGAGGTTTCGCTTTTGTTGAATACGATTCAATCGACGACGCAAA
AGCAGCTCACAAAAGGATGTCCGGTAAAGATGTTGATGGACGTTCTGTAA
CAATCGTTTATGCTACACCAAGAGAAGATTTCAAACCAGGTAGTGGTCGT
GGAGGACGAGGTGGTGGATTCGGCAGCGGTGGCGGCCGTGGAGGTGGCCG
TGGACGTGGTGGATTCGGCGGCGGTCGAGGTGGTCGCGGGGGCGGCCGTG
GAGGTCGTGGTGGAAGTACACCATCAAACAAAGGAAGCATCCAAAAATTC
GAAGGCTCCAAACTGACATTCGATAATGATTCAGATTAAAGAAACAGACA
GAATGATAAGAGATTGTCGTCGTTATTAACGTATAGAGAGGATCGGGATG
ATCTCTCTTAACGGCTGCTGGCTGGCCCTCAGGTTTCCCTTCTTCGAACA
CTTGATGAAACTTTTACGAGGAACTCCTCTGTAAATAAACGAGCTCAACT
AATTAGCTTGCTTGAAACAATGATGAACGTTGCGTGTTTGTATTGCAATG
TACTTATTTGGTTTATGATTCTATTTGAAGGTGCGCGGGCTGACTCCCAT
TCCTTGCTGTCTTACAAATATATAACTTGCCGAAAAAGCTCCTTGTGGTC
CGTTacgaagttttgaaaaaacaaaatctaGCTAGCAAAAATTATTCTCA
TTAAATTTGTGTGCTTACCATATATTGACATTGAAAGTCAACAATTCTTT
ACATTAAGACTCATTGAtcacatttttatttcatcctATGTGCGTATTAA
TACCTTCAAACGGGCTATAATAAATAACAAtacattatttttttgtattt
ttttcatggTTTTCAATTGGCTTGGAAacttttataaacaaaacttttac
AGGACATAATACTTTAttatacatttttaatttttgtcattttttggtaa
aaaagacATCGGATATACGGACAGTGGTAAATAAAAGATTACGTTTTCTG
AACACTCCACTCCCTTCAAAATGCagtacatgtttttataagcatatctt
aGGCTCAGATATTgggaaaattaagcatatgtcTTGAGGAAATTGATCTa
cttaaaagaaatactttgtTGGAAGGATAATTTTAAGTAAATGATttcaa
agctttaaaaaaaattcgataTAATGgag
Run BLAST on NCBI

transcript from alignment at scaffold_242:69526..80810+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054178 ID=TCONS_00054178|Name=TCONS_00054178|organism=Clytia hemisphaerica|type=transcript|length=11285bp|location=Sequence derived from alignment at scaffold_242:69526..80810+ (Clytia hemisphaerica)
CCGCTAGCGTGATTTTTCATCCATGTGCTAAACCAAGTTCTTTTACAAAT
ATTGCTGAACGGCTTGCTGTTGGAGGGAATCTTTGGTGTGTAATTTGCTC
TAAATTGCTcttaaattcaagaaaatacaaaaatggtCAAAGCAAAGACA
AAAACAATAAAGGCAGAGGAAATTCCAAAATCCAAGAAAGCTAAAAAAGT
TGAAACTGACTCTGACTCGTCATCTGAAGAAGAGGAAGAAGTCAAAGTCG
CACCAAAGAAGAATGGAAAAGTCAATGGTATGTTTTTTACATTAGATTAg
acatttgatattttatgcCTAACATCAGAGTAACTGGGATAGGAAAAATA
CAGTGGGTCTCAGGGAAGTTTAGGAAAAAGTAGCTGTAACAAAAATGACT
ATGCTATCAACTTTGTTGGAATTTCACAATTTGTAAGCTTGTAAGGCTTG
TAAGACCCTCAAGGATACCTGGTGTAGGCGAATAGGTAGATAAGGGGCAT
TTGACTGCCTGGATGCAACTGGAAAGATCCAGGCGTTCTGTGGGATCCTA
GGATTGTGGGGAAGCATCTGCCTTTAAAAAACAGAGGCGCACTGATATGT
CTCTAAACAAGTCCAGGTCCCATGAGTCCAATCCAAGActgtttgaaatt
tattttaaatttcctATTTGGAGTTACCAAAATTCTTTATGAAAATCATT
TAACACAAAActtgatcaaatttaaaatgtaaaagCAGCAAATATATATA
CAGAATAGAACAGAAAAATGAAGTGACTGCTTTTGTAGAAGCGGTTGTTG
TGTAGCGCTTTGTAAggcaaaaaatctttgaaaattgcagataaaatctt
taaaaaaacacTTGATGATCAAGAGGCTGGCTACGTTGAATCTACAAAAT
TATTTGGATAGTATTGCCAAAAAATCTGACAAATATTACGACTAGAAAAG
GGTCAGATTTTTAAGATAGAGCGTGAGCGAGTTGGAGGACTTGAACCAAC
TTATTTGTGACCCAGGCCTAGCTCAACAAAACCATGTCCCAATCAAAGAT
AAAGAAGAGGAATGTGGAATTATTTCTGCATTTCGATCAGCTATCGAAAC
ATAGAACTATTTCTTTAATGTGGTTTAAATTGTTTTTagtatttacattt
tttgtgaaatttctagCTTCCATTTGAAAAAGGATATCATTTTTTTTTGA
GTCACAAAAGATACGGAAATTACTACATAGCAGTCAGCTGTAAATAATTG
GAAATAAAgttaattaaattttcaaaatgatttagGTACAACCAAAAAGC
CTGTCAAAAAAGAAAGTTCATCAGAAGACAGTGACAGTAGTGAAGAAGAA
GCCAAACCAGCAAAGAAAAATGGAGTAGCAAATGGAAAAGCTAATGGGAA
GAAAGGTAAAATTTTCAGTTACAGTACACATTgctatatcaatttttttt
aaatatatcatTTAGTAAGATTTTGCTGAGGCTTGgcttttcttatattt
ttggcCCTTTAAGCCTCAAATTTTTCTTATCCTGTTCTCATggggtgtaa
ttgaggtataTCAAgcattatacccaatttttactactttgaccccaaaa
ttagtatttttctTAAATATTCTAATGCTtcggcgattttgagcctcaaa
gtgtataccttattacacaaatattactagtATTTTATTAACACAAATTG
AAAAGTTTCATGTTAATAAAAACCAGCCGTGATGTCCTTGaagaagcaaa
taaaatttgtgttaattttttgcgtgttaatttcaaggtcATTGAATACT
TTCCTCGTAATATTTGTGCAATAAGGTAATTAtattattttctggtttac
agacattatgaggaaaagttttggacaggaggatggaaaaaaaaataaaa
ataaaattaatgttttaaatttttttttagtttctttttaaaaatctgaa
ttcaaaggaaataataaaataaaattttacgaaatttccTAAAGTatcaa
atttttagatttaaagacaaaagaatAAAGTGCAAGATGTTGTGTAGATT
AGTTTTAGATACGCATCTACggataaaaacataaaaaatgtacACATAAA
GACTGATATGTGTTTATGTAAGACTGAcgtaggttcccacttaggttccc
ccatcccacttctGGTATGCCTATTTTTCTATCTACTCTTGAATTTTAAC
AATCACATAAAGGACCCTGAATAAAAGCaattacaataaaaaatcaactg
cGTAACACAAGAGTTGtataatttagtttttttttatttacttgcCTAAA
CCTGGAAAGTAAgacagaaaaaattaaattaaaaattaaaaaaattaaaa
attgatagATATCTCATATAATACTCAGTACTGGGCAATACCTAGTTAAT
TTAACATATGGGGTATATTTTGgggcaaaaatttaatttttgacaaTCTA
ATTTCACTTATTGGATTTTGAGGAAAGTTAGCTAAAATGTTTGTTTTAAC
CTACAGCACCAGCAAAGAAAGAATCAAGCTCAGAAGAAAGCAGTGATGAA
GAGGAAGAAAAACCAAAAGCTAAAGCTGGTAAAAAGTTTAAagcctttaa
attgagaaaatgcaGATTACACACACAGATCTAGGGGGTTTAAAAGATCT
TTGTGAAactaaaaaatttttgggggattttttttcattcaacaaccaaa
tttagaaaattagtATTAATAACATTATTTTGGAATAACAGACATGAAGA
CAATCCCATCTTAGTCTTCTCAGGACAAATACAGCATTTTCTAGAGCACA
ATGTTGGTTTTACTACACaaataatcatatttttcttctttttttgtcaa
ACTGATACTTTACCTTTACTGCGTTTTTGCATAATCAAAGATAGAAGtgc
ttttttgagagaaaaaaacagttttgaaaactaattttagGTTTTAGTAC
TGCCACTTGTAGACCTTaagtagtaagtctgcgaccgcagtcggaggcga
cccgaaggctcctctttcgatagctgtctacccgaaggtaggggagggcg
ccactctttctcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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ttttttcacctttcaaagtctctctaagggtcggaaaaatcagaaagttt
taaattagtctctctaagggtcggaaaattcaggaattttatgaaatttt
ttgatttccagagaaaaagttgtaataaagtctctctaagggtatgactt
ttttcaaaaatcgaaaaaaaacattcaaagagtctctctaagggtcacct
tttcagcaaaaatcagtctctttaagggttgGTTTTCAGAGGTCCCATTC
gtacatacccctcattcgccaaccctagtaccccccggatgaacgttatg
tacagaaaaattttatcaCAACTAAAAAAGTTCTAAGATCTGCTAANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGTATCTGGatcctgaccc
cccccctgaccAAAAAGGGTACTTTTTGTAGTGTTTTACCACCAAAAAGG
CTGTGTTAAATATATAAAGAAAGCAGTCATAAATAGTAAAAAATTTATAA
GTGATAACAAAACAGGCCATGTCTTAGAAAGGTAGCGTCCATTGGTGACC
AAAAAGGGTACTTTTTGTAGTGTTTTACCACCAAAAAGGCTGTGTTTAGT
GAAAGGGGCAGGATCAGTTAATAAGTGGGCGCTAAAAAAGGGCATTAAAA
ATGGTCAGACAACAGAACACATAATTGTTCTGGGTTTCGTCGCTCAAATT
GAATTGATAAAGAGGGCGAAATGTTATCAAGATATTCTATGTTTCTTTTA
AGTGCATTCTAGACTACTCTTACTTTTGCGGGCAGTGCAAAATGTTGTGT
GGATATTTCTCAATGGTGTGTGATATGCTTGTTTACCAGATTTGTCTTAT
CTAACAACTTTTTTGATTCAGCCCCATCTAAGAAAGTAGCAGCAAAGAAA
GAATCAAGCTCAGAAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCCAA
AGCTAAAGCAAAAGGTACAAATTAATGCAGTGATCTCCTTTAatgtttga
aaatctctttcaTATCATGTGATGCtgcaaaattttgaagattaatTTTC
ACATCTAGATTGGGTTATATAACAAGAAAACATGAGTTAATACCTGCCTT
ATGGATCATATGGAACAGTGTTGTTGGGCCTCCTAAAGTTTCCTGAATTG
TCCTAAATTTTGAAGCCATCTAAAATCTCCTTTGAAGGTGAAATTTTGAA
CATACAAGTTTCAGAAATTTGATTGTGTTTAAACAGTAATAAATGCAAGC
AAAtctctttgattctttttagCTCCAGCCAAGAAAGCACCAGCTAAGAA
AGAATCAAGCTCGGAAGAAGATAGCAGTGATGAAGAGGAAGAAAAACCAA
AAGCTAAAGCAAAAGGTATGATTATGTTGTTTTGGTAAGAAACTAACTTT
GACCTCTATTTCATATAATTGATCCTGGTACATCACAAATGACTCTTTTG
CTTAAGTTTCTGTCACAACAAACTTTGGATTTAGACACTTAAAGTTTTGA
CACTCACATGACTGATTAATATTAAagtttccattttcattttaatcCAT
TAACATCTCTTTCAGCTGAAAGCCGAAAGTCTGAGATAGCcttgtccaaa
ttttcgtaatCTTACTAAAACATTGCATTTTTTAGCCCCGGCCAAGAAAG
CACCAGCTAAGAAAGAATCAAGCTCAGAAGACAGTAGTGATGAAGAGGAA
GAAAAACCAAAAGCTAAAGCAAAAGGTATAATGATCTTATTTCATATATA
GGTAGTGGTTACTTTTTAAAGGATAGGTTCTACAGTTCAATATTCTTAGT
ACGCAGCTGTGTATTGCTTCAACATCTGATTGTACAGATTTTTctccaaa
tttaaatttctacAATTTTGAAATGAAGTTAAAGAAATTTGTTCCCTTGA
TGTTTTGAAGGTCTATCTGAAATAAAAAGCTTTGCTTTGAGCATTGCAAT
TTTCAAATCTTGGTTCAATTTTTTTAAGCTCCAGCTAAGAAAGTAGCAGC
AAAGAAAGAATCAAGCTCAGAAGAAGACAGTAGTGATGAAGAGGAAGAAA
AACCAAAAGCTAAACCTGGTAAATAGTTTGAAACATGCCAAAGATTTATG
AAACTCTAccatttaaagggataatcagatgggttgagatttttttgttt
ttactaaaagtcaaaaacttctTGTAACATAATTACCTTTGCTTTAGAAA
TACTtaattaaaaagattttgagGTTTGCTTAGGAAAATAGAAGGATTCC
GCATACCAAATATCCCAAACCCATAGTGTGCAGTGgggtctgaccccccc
ccccccccttttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNccccccccccccatttataTTTCATTCCCCCTATATTT
GCATTGGTTGGCAAAcaatatcatactccaggatgcaagtcTCAAATTTT
CAATCCGTTGGTGGCTAAATAGGGCATTTTTTCCTAAGTTgttccactaa
aaaggctgtttttaccaatattttagtaatttcaggaGGGGAAGCGGCTG
ATAACCAGACGCTTAAAGGGCATAAAAAATGGCCTGATAGAAAATAAGGG
GAAATAAGAGAGAGCAGACCACTTTTCATACCATTCAAGCATCTTGTAAT
ATGATGCTGTCCCTATGAGAACGTTAAAATTATTGTGAAAACATCCCTTT
TAAGTTTTacaggaaaaaatgtttcaaattgtCATTTAAGCTTAAAATAT
GGAATTTTGGCTTTAGTGAGCATGCATTTGGTGAACctaattttgcagaa
tttaatttcgcggttttagacAAACACACAAATATTCTCATGAATAAAGA
ATAACctataaaattggtctttttaggcaATAAAGgacatattttaaaca
aaacatCCTCTCAACCGCAAAATTATATTCTGCAAAACTtccgaattttg
agctgtgaaccaCTAAATGAAATCCCGTGAAAATATCTTCCCTCAAGTTC
ATATCAAATGCTTATTCTTTTTTAATTCAGCCCCAGCTAAGAAAGTAGCA
GCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTGATGATGAAGAGGAAGA
AAAACCTAAAGCTAAAGCAAAAGGTACAAACCGAGGAAGTCctgttttgt
aatattttgataaagaaaCCAAAGTTTTCTTGTTGTCACTTTTGTGACTT
CTGAATTGTAGGTTTAGTTTCAGCTGATTTTATATTATGATTTAATATTT
AGCTCCTGCCAAAAAGAAAGCTGATTCCAGCTCTGAAGCAGAAAGTTCAG
AAGAAGAGGAAGAGAAACCTGCGAAAAAAGGTAATTTCATTAATATCCtt
ggtctttattttattattagtgaggttaagtaaatcagtaaaatcacgac
gacgaacgaaaatttaaaatttctttcaaccaatcaaaagtAATTAGCTG
ATTTATTTTAGCCCCACGTTAAGTGATAGCTCCcaagtacataggtcccc
ccaaaaaagtggtgtTCTTCCAGGCCCCTCCGTTGGGAAAAATTTCACAA
CCAGcagggggctgacgctatgaaGTGNAAAAAAGTGGTGTTCTTCCAGC
CCCCTCAAAAAAGTGGTGTTCTTCCAGCCCCCTCCGTTGGGAAAAATTTC
ACAACCAGcagggggctgacgctatgaaGTGTTTGCTTCTGTGGTGTGGG
AGAGGGCTGCTTTAACATCATGCTTTGTCATTATAAGCATGCTGTCTTAA
TTTATGGTGTGCTGTTTAAGTGGAGGCATGCGTGTCACATCAAATGATTC
AACatgagaaaaaaaacgaaattctATCTTTTTTAAGCACCAAAACGAAA
GAAGGATTCCTCATCTGAAGATGAAAGTGAAGAAGAGGAACAGCCCAAAA
AACGTACGTAATATGTCTTTAACTTAAGtgttttttcagatttggtTCAT
TTTCACCGGCTCATTTTCATGTTGAGTGACCAAGGCTTTTCTCAGGTCAC
GAGCTCCCCAGCATGTATTCTGCAATGCTTGGGTCATATCACCAGAATGT
AATATTTCTAAAACTTGCCAACGATTTTAAGAACTTTTACGACCTTTTAT
TATcatagaaaaagaagaaaagaaaaatttgaaacgtAAAGCAGACGATT
TGGGAGATGTCAATACACCAAAGAAAGTAAAGGAAGCAACTTCTCTTTTC
ATTGGTGGTTTATCATACTACACAACTGAAGATGGACTTCGACAATTTTT
CGCAGATAACGAAATTAATCTTACTAATTGCCGTATTATTACTGATCGTG
AAACAGGAAAATCAAGAGGATTTGGATACGCTGATTTTGACAGCCAAGAA
GAAGCAGATAAATGTTATAAAATTGAGGACACTACTTTAGACGAACGTCA
ATTACGCTTTGATGCCTCTAATAGTGGAGCTAAAACGCCGGGTAGTGGTC
GTGGTGGACGTGGAGACCGCAGAGGTGGTGGTTTCTCAGCTAATCGCAGT
GGTGGTCGTGGCGGCCGCGGAGGATTCAACCGAGATAACGAAACCCCAAC
AAAATTATTACTTGTGAAAAATCTCTCATATGACACTTATAATGAATCTT
TGATGAGTAAATTTAGTGGCGCTAATGATGCTCGAGTTGTTAAAGACCAA
GATGGAAATTCTAGAGGTTTCGCTTTTGTTGAATACGATTCAATCGACGA
CGCAAAAGCAGCTCACAAAAGGATGTCCGGTAAAGATGTTGATGGACGTT
CTGTAACAATCGTTTATGCTACACCAAGAGAAGATTTCAAACCAGGTAGT
GGTCGTGGAGGACGAGGTGGTGGATTCGGCAGCGGTGGCGGCCGTGGAGG
TGGCCGTGGACGTGGTGGATTCGGCGGCGGTCGAGGTGGTCGCGGGGGCG
GCCGTGGAGGTCGTGGTGGAAGTACACCATCAAACAAAGGAAGCATCCAA
AAATTCGAAGGCTCCAAACTGACATTCGATAATGATTCAGATTAAAGAAA
CAGACAGAATGATAAGAGATTGTCGTCGTTATTAACGTATAGAGAGGATC
GGGATGATCTCTCTTAACGGCTGCTGGCTGGCCCTCAGGTTTCCCTTCTT
CGAACACTTGATGAAACTTTTACGAGGAACTCCTCTGTAAATAAACGAGC
TCAACTAATTAGCTTGCTTGAAACAATGATGAACGTTGCGTGTTTGTATT
GCAATGTACTTATTTGGTTTATGATTCTATTTGAAGGTGCGCGGGCTGAC
TCCCATTCCTTGCTGTCTTACAAATATATAACTTGCCGAAAAAGCTCCTT
GTGGTCCGTTacgaagttttgaaaaaacaaaatctaGCTAGCAAAAATTA
TTCTCATTAAATTTGTGTGCTTACCATATATTGACATTGAAAGTCAACAA
TTCTTTACATTAAGACTCATTGAtcacatttttatttcatcctATGTGCG
TATTAATACCTTCAAACGGGCTATAATAAATAACAAtacattattttttt
gtatttttttcatggTTTTCAATTGGCTTGGAAacttttataaacaaaac
ttttacAGGACATAATACTTTAttatacatttttaatttttgtcattttt
tggtaaaaaagacATCGGATATACGGACAGTGGTAAATAAAAGATTACGT
TTTCTGAACACTCCACTCCCTTCAAAATGCagtacatgtttttataagca
tatcttaGGCTCAGATATTgggaaaattaagcatatgtcTTGAGGAAATT
GATCTacttaaaagaaatactttgtTGGAAGGATAATTTTAAGTAAATGA
TttcaaagctttaaaaaaaattcgataTAATGgag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034176XLOC_034176Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054178-exon-scaffold_242-1491911889:69526..69802TCONS_00054178-exon-scaffold_242-1491911889:69526..69802Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1510915933:69526..69802TCONS_00054178-exon-scaffold_242-1510915933:69526..69802Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1575043694:69526..69802TCONS_00054178-exon-scaffold_242-1575043694:69526..69802Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1491911889:70811..70930TCONS_00054178-exon-scaffold_242-1491911889:70811..70930Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1510915933:70811..70930TCONS_00054178-exon-scaffold_242-1510915933:70811..70930Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1575043694:70811..70930TCONS_00054178-exon-scaffold_242-1575043694:70811..70930Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1491911889:76213..76290TCONS_00054178-exon-scaffold_242-1491911889:76213..76290Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1510915933:76213..76290TCONS_00054178-exon-scaffold_242-1510915933:76213..76290Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1575043694:76213..76290TCONS_00054178-exon-scaffold_242-1575043694:76213..76290Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1491911889:76904..76993TCONS_00054178-exon-scaffold_242-1491911889:76904..76993Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1510915933:76904..76993TCONS_00054178-exon-scaffold_242-1510915933:76904..76993Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1575043694:76904..76993TCONS_00054178-exon-scaffold_242-1575043694:76904..76993Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1491911889:78006..78098TCONS_00054178-exon-scaffold_242-1491911889:78006..78098Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1510915933:78006..78098TCONS_00054178-exon-scaffold_242-1510915933:78006..78098Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1575043694:78006..78098TCONS_00054178-exon-scaffold_242-1575043694:78006..78098Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1491911889:78228..78305TCONS_00054178-exon-scaffold_242-1491911889:78228..78305Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1510915933:78228..78305TCONS_00054178-exon-scaffold_242-1510915933:78228..78305Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1575043694:78228..78305TCONS_00054178-exon-scaffold_242-1575043694:78228..78305Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1491911889:78813..78878TCONS_00054178-exon-scaffold_242-1491911889:78813..78878Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1510915933:78813..78878TCONS_00054178-exon-scaffold_242-1510915933:78813..78878Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1575043694:78813..78878TCONS_00054178-exon-scaffold_242-1575043694:78813..78878Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1491911889:79084..80810TCONS_00054178-exon-scaffold_242-1491911889:79084..80810Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1510915933:79084..80810TCONS_00054178-exon-scaffold_242-1510915933:79084..80810Clytia hemisphaericaexon
TCONS_00054178-exon-scaffold_242-1575043694:79084..80810TCONS_00054178-exon-scaffold_242-1575043694:79084..80810Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:69526..80810 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4.81844e-06	0	3.31356e-06	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054178 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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