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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053732 ID=TCONS_00053732|Name=TCONS_00053732|organism=Clytia hemisphaerica|type=transcript|length=1000bp
gtgaaaaataaaaaaaagtgaataaaaaattattgtcTGGTGTATAAAAG
TGAGAACAACCACTAGATTTAAATAATCACAATACAACCATAACAATCTT
AACTTTAGAAAATCCTACTACTTATCTGGAAATTGCCCCAACCTGCAAAA
TGTATAATCGACCATTACTGAGTACAATTTTGCTGATCCTACCGACATTG
AATCTTGCATGCAACTTCACCGAGATTGATCCTATCACACCAGTACACAA
ACCCCTTCAACTGACTATCCACACAACTGGATTTGTAACGAGAAACTTGT
TGGGCGACCcgctaaaatatttcaaatcacTTCCAGAGAAATTGGTTTAC
AAAAAAGAAGCAAAACCAGGGGTTATGGATAGTATTCTTCTTTCCCTTCC
GGTTGGTTTAATTTGCACAATTAACGTGTACTTGAGTGGAACTAAAAACA
TTTCCTTTGCTTATAACTTTGTCGAAGACTATCGTGGGGATGTCACAAAA
CCGATTTGCACTCGAATAAAATACACGTACGAGCTCAATCAAACTCAAGA
TTTTGTCTATTCTAAAGCATTTGCAGGGGATCATAGACATATCAGAACAT
ATTATATTCTAAAATTTAAACTAGAAGATATGAAATCATCAGGCTGTTAC
AGAAATGTTCCTCAGTCATTTATTCTCCTAGGATTTAACCTGTTTGTAAt
ttgtttttgtgtcttttaacCCTCTTTAGACGTATGCCGAATCTGTTAAC
ATTGTGGTAGGAGTAACAACGTGATGGGTTGGCAAAAGCTGGCGAGGCGA
TTTTGTAGTTAAAAAACTATTATTTTAAGgcccaatagaccttttcataa
attacgccacgaacatcacttgcctcgtattgaAACAATCaccatggtga
ttatatccCTTAAGACaataaccctttaagtgccaatatTGTATacatca
gacatgggctatgtaggagggcgaaaccctcctgtaatgcccagtttgag Run BLAST on NCBI transcript from alignment at scaffold_233:572808..573807 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053732 ID=TCONS_00053732|Name=TCONS_00053732|organism=Clytia hemisphaerica|type=transcript|length=1000bp|location=Sequence derived from alignment at scaffold_233:572808..573807 (Clytia hemisphaerica)
ctcaaactgggcattacaggagggtttcgccctcctacatagcccatgtc
tgatgtATACAatattggcacttaaagggttattGTCTTAAGggatataa
tcaccatggtGATTGTTtcaatacgaggcaagtgatgttcgtggcgtaat
ttatgaaaaggtctattgggcCTTAAAATAATAGTTTTTTAACTACAAAA
TCGCCTCGCCAGCTTTTGCCAACCCATCACGTTGTTACTCCTACCACAAT
GTTAACAGATTCGGCATACGTCTAAAGAGGgttaaaagacacaaaaacaa
aTTACAAACAGGTTAAATCCTAGGAGAATAAATGACTGAGGAACATTTCT
GTAACAGCCTGATGATTTCATATCTTCTAGTTTAAATTTTAGAATATAAT
ATGTTCTGATATGTCTATGATCCCCTGCAAATGCTTTAGAATAGACAAAA
TCTTGAGTTTGATTGAGCTCGTACGTGTATTTTATTCGAGTGCAAATCGG
TTTTGTGACATCCCCACGATAGTCTTCGACAAAGTTATAAGCAAAGGAAA
TGTTTTTAGTTCCACTCAAGTACACGTTAATTGTGCAAATTAAACCAACC
GGAAGGGAAAGAAGAATACTATCCATAACCCCTGGTTTTGCTTCTTTTTT
GTAAACCAATTTCTCTGGAAgtgatttgaaatattttagcgGGTCGCCCA
ACAAGTTTCTCGTTACAAATCCAGTTGTGTGGATAGTCAGTTGAAGGGGT
TTGTGTACTGGTGTGATAGGATCAATCTCGGTGAAGTTGCATGCAAGATT
CAATGTCGGTAGGATCAGCAAAATTGTACTCAGTAATGGTCGATTATACA
TTTTGCAGGTTGGGGCAATTTCCAGATAAGTAGTAGGATTTTCTAAAGTT
AAGATTGTTATGGTTGTATTGTGATTATTTAAATCTAGTGGTTGTTCTCA
CTTTTATACACCAgacaataattttttattcacttttttttatttttcac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053732-exon-scaffold_233-1491911889:572808..573807 | TCONS_00053732-exon-scaffold_233-1491911889:572808..573807 | Clytia hemisphaerica | exon |
| TCONS_00053732-exon-scaffold_233-1510915933:572808..573807 | TCONS_00053732-exon-scaffold_233-1510915933:572808..573807 | Clytia hemisphaerica | exon |
| TCONS_00053732-exon-scaffold_233-1575043694:572808..573807 | TCONS_00053732-exon-scaffold_233-1575043694:572808..573807 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_233 | supercontig | scaffold_233:572808..573807 . |
Blast
The following BLAST results are available for this feature:
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