TCONS_00053470 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053470
Unique NameTCONS_00053470
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1001

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053470 ID=TCONS_00053470|Name=TCONS_00053470|organism=Clytia hemisphaerica|type=transcript|length=1001bp
ATagcttgtttttcttttaggtataaaaaatgaattttccaTATAAAATA
TTACTAGTATGCTTTATCATTGGACTTTTCACAATAAACACATGTTATTC
GCAAGACGATGGAGCAGGCAATCCCAATGATTCGAAATATGATAAACAAA
ATGGTAATCAAAACTCTGTAAGTAAGGATCAGGCTAAAGATGATTCTTTT
GCTAATAAAAAGACAGATGTGGCAAGTGGAGACTCTTCAAAAGTTGAAGG
GGATGTTCCtgtttttgttaaaaataacACAACAATAGCCCCagttgaaa
aagcagaaaaaaagaCCACAACAAAGACAGCTGCTCCTTTAGCTGCTACA
ATAACTACAACTCAAAAGACTCCTGGtccaacaaccacaacaacagTTGA
AGCTAATCAGGTCATAGCTGACCCAACTACAACAACTACAACTCAAATGG
CTCCTGGtccaacaaccacaacaactacaacaactaCAACTCAAAAGACT
CCtggttcaacaacaacaacaacaaccactccAACCACAACCACCCTCAC
TCCAACCACAACCACTACCTCTACCCCATCCCCATTCGAAGAAACAAACC
AATATTCTGAGAATATTTACAAGAATATGAATACAAAAGGAGAACCAGAT
ACTGGAGGAGGTTTTCCGATATTTTTGATGGTGGCAGTTGTATTTGTTGT
TGTGGCTTACTTTGTTTATCATAATAGAGGAAAGGTGATGGGTTATCTGG
TTGAAGGTAAGAATGGTGGTAGTACTGGGAATAGAAGAGCACCTGGTTAT
CGGAGGCTGAAGAACTTGGAAGAAGCAATGCCAGGAGTAAGAAaTCACAA
TGCTTGACAAAAACAAAGGTGTTTGATAGCTTGACAAAAATGTCGGAGGT
AATTCAATCGTTGCTGCTGCACTGGATTCGGTATGAACTGGAAGAAGATA
AAGAAGAAgGGTCAAATTCGCTAAACATGGCACCATAAAAGATGGAAGAC
A
Run BLAST on NCBI

transcript from alignment at scaffold_231:270680..286409-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053470 ID=TCONS_00053470|Name=TCONS_00053470|organism=Clytia hemisphaerica|type=transcript|length=15730bp|location=Sequence derived from alignment at scaffold_231:270680..286409- (Clytia hemisphaerica)
ATAGCTTGTTTTTCTTTTAGGTATAAAAAATGAATTTTCCATATAAAATA
TTACTAGTATGCTTTATCATTGGACTTTTCACAATAAACACATGTTATTC
GCAAGACGATGGAGCAGGCAATCCCAATGATTCGAAATATGATAAACAAA
ATGGTAATCAAAACTCTGTAAGTAAGGATCAGGCTAAAGATGATTCTTTT
GCTAATAAAAAGACAGATGTGGCAAGTGGAGACTCTTCAAAAGTTGAAGG
GGATGTTCCTGTTTTTGTTAAAAATAACACAACAATAGCCCCAGTTGAAA
AAGCAGAAAAAAAGACCACAACAAAGACAGCTGCTCCTTTAGCTGCTACA
ATAACTACAACTCAAAAGACTCCTGGTCCAACAACCACAACAACAGTTGA
AGCTAATCAGGTCATAGCTGACCCAACTACAACATCTACAACTCAAAAGG
CTCCTGGTCCAACAACCACAACAACAGTTAAAACTAACCAGGCCTTAGCT
GACCCAACTACAACAACTACATCTACAACAACTCAAAAGGCTCCTGGTCC
AACAACCACAACAACAGTTAAAACTAATCAGGCCTTAGCTGACCCAACTA
CAACAACTACAACTACAACAACTCAAAAGACTCCTGGTCCAACAACAACA
ACAACAACAATTAAAACTACTCAGATCATAACTGACCCAACTACAACAAC
TACAACTCAAATGGCTCCTGGTCCAACAACCACAACAACTACAACAACTA
CAACTCAAAAGACTCCTGGTTCAACAACAACAACAACAACCACTCCAACC
ACAACCACCCTCACTCCAACCACAACCACTACCTCTACCCCATCCCCATT
CGAAGAAACAAACCAATATTCTGAGAGTAAGCTAAAGTTATTCAATTATT
TTTGCTTGAAGGGAAAGTGACTATTATGGAAAATTGACAATTTGTATACA
TTTTATGCTTTCTGTTAAAATAAAGAATAGAGGAGGTCACTTAAAAATGT
TACTTAAAGAGTTGCTTATGTTTTGTCTTTAAAACCAATGATTTTTTTGT
ATAGCCAACCTAGCATTTAGTATTTTCAACACAGAATGGCTTCTTTTTTT
TTCAAAAACACAGACCTGTTAGTGTAAATAAACATGGTGTAACTTTCGAA
TTTACATAAAACCATTGCTCTCATAACATCATTACATTTTACATTTGTTT
CTTTTGTAGATATTTACAAGAATATGAATACAAAAGGGTAAGCTTTAAAA
ATTATTGATTGAATTTAATATCCTGATTCTCCATTAGCAGCTTTTAAAAT
TCTTTAAACGAGCCATTTATCAGTAATGACAACAATATCCTCAATAACCT
AGTTATCATTTCCATTAAAGATGCCATGACATGAGCTTTTGTAGGTTTAT
CAGCCCTGATCCGTTTATTCTTAATCAGTCTTATAAATAGGACTGTTTTT
TTTTTGTCAATATAAACCATCCATTGAAATTGCTTTTTTCAGAGAACCAG
ATACTGGAGGAGGTTTTCCGATATTTTTGATGGTGGCAGTTGTATTTGTT
GTTGTGGCTTACTTTGTTTATCATAATAGAGGAAAGGTATGTGATTTTGA
ATTCCAATTGCTTTCATTTTTAGCTTTGATCAAATCCATTATCAATAAAA
CAGCATACTTGGTTATCAACGCTTGATCAGGGCCACTATCAAATCAAATG
TACAAGTGCACCGGCCCCAAAAGGGATCAAAAATAATTAATTTTCATTAT
AACTTTTTTTCCGGATGTTGGGCCAAGCTGAAAAATTAAAACGGCATGGG
AAATACTACGAGAAATAACATTATGCTCGGAAAGAACACAACAGCAGTAA
ATTGACCATGTTATGTCTAATTTGTTGTCCTTGCAAAAAAGTGGAAGTGG
ACCATAAGCAATATAAGCAATTAAACTCGACAAAAGGTTTAGAACCATTC
GTGAGAGGTCAGTCTAGCTAGTTGGTATATGGTTGGCTTTATCGTCCAGG
AATGGACATGGATTTATCGGACAATATTCTCAATACTATAGACCACTTTT
TTCAACTAAATAGCATTATATTTTTACCCTGGCCTCTTTCCATTGAGAAT
TTGAAATCAGAAACTTTTACTCTCTTTTACTTGGTCAAATAATAGACATG
TTGTCTTTACTTTTTGTGTTACCGGACAATTTATTGTCATTTTAAGAACT
CTTTTAAACTTGTTTCTTACCTTGCTTGACATTTTTATTAAATTTCAGCT
TGCGTNGACTCTTTTAAACCTGTTTCTTACCTTGCTGGACATTTTTATAA
AATTTCAACTTGCATAAGCAAAGCAGTCAAGAGTTAATGACCATAAGACA
ATTTCTAATTCTATGCTTTCGGGCAATTCTGTCCCAATTTGGACCACACT
TTAAATTAAATTAAATTAAATATTCTATCCCAATACCATCAGACCATGAT
AAGCTAGATTAACAGGACCTTTTATCTTACCGACAAACAATATTGGAAGT
CAATAGACATATATTTTTAAAAAGATTCAGCTCAAAATATAACCATATGA
CTAAAAAGGTACAAAAATGGCCATTTCTTGTACATTCGATTTGACAAGAT
CAAGCAATATTTTTCATTTAGGACGCCTTGTGTTCTGCTGATTAGATTTT
CTTTGCAAATAATCCTTTTTAAGATGTCAACAGGACCTTGAGCAACCTGT
AAAACTAACCCTCCAACCTTGAAAACCTTGATATTTATATAATTTTTGAA
AAAAACAATGAATTACAAATTACTGAATTAGGTACTGTCTTATCTAATCG
ATTTTTTTTTTGCTCACTTTGCTTGCAATCATTTTGAAAAACTTTTTGTG
ATGAGAAAGCTGCATTTAGTCTTAAACAGGCCATGCTGAAGGATATGTTT
ACTATTCAAATCAATTTGAAAATTAAAAATCTTGAAAAAGACAAGTTATA
GTCAATTAAGAACCTTGAATATCCGCTAAAATTTGGTAAATATGGAGAAG
AAGCTCCCTAGATATCCTAGATACCCTAAAATTTCTTTCTCTCTTTCATT
TCCCATTGAGAAGCATTGGCTATTATGAAGTTATTTGAATCAAGGATTAA
TTTTCAGGTGATGGGTTATCTGGTTGAAGGTAAGAATGGTGGTAGTACTG
GGAATAGAAGAGCACCTGGTTATCGGAGGCTGAAGAACTTGGAAGAAGCA
ATGCCAGGAGTAAGAAGTAAGAATATTGTGCTGTTCTTTTAATTGACTAC
TATAAAATGAACAGGTGAACCTTTGTTGTATGAATGTGTGAAGTTTTTGT
TACATTAAGGGGTCATTCCAAGAAATTTTCAACACGATTGGAGATCTATG
TCTATAGAAGTTTTTGTTACATTAAGGGGTCATTCCAAGAAATTTTCAAC
ACGATTGCAGATCTATGTCTATGGAAGTTTTTGTTACATTAAGGGGTCAT
TCCAAGAAATTTTCAACACGATTGCAGATCTATGTCTATGGAAGTTTTTG
TTACATTAAGGGGTCATTCCAAGAAATTTTCAACACGATTGCAGATCTAT
GTCTATGGAAGTTTTTGTTACATTAAGGGGTCATTCCAAGAAATTTTCAA
CACGATTGCAGATCTATGTCTATGGAAGTTTTTGTTACATTAAGGGGTCA
TTCCAAGAAATTTTCAACACGATTGCAGATCTATGTCTATGGAAGTTTTT
GTTACATTAAGGGGTCATTCCAAGAAATTTTCAACATGATTGCAGATCTA
TGTCTATGCCCGATTGAACCATTGGGGTGTTATTAAATGGTGTATGGGTT
GCGATCCTCCTAGGTCCCTACTTGCGGAATTAGGTCAAAAAAGATTGTGA
CAAAACGTACCCCTCCTCAGGAATGACCGTAAGTTTTGTTTATATTTCAC
GATTTCACTACTAAACGAAAATTTATTTTACTTTTAGATCACAATGCTTG
ACAAAAACAAAGGTGTTTGATAGGTACATTTTAGCAGTATTGTCTTTTAA
GTAATTATAATATAAGTTGAAAGAGTACATATTGTGTTTGCATTGAATTT
TATACCTTTTCGACCGCGGAGCGGTGTATTCAGAGACGTTTTGTATGGTG
AAAAATCTCGCATATTTGCGCGCGGTAATCCGTTCTCTAAAGTCACGGNA
ACCGACGTGCCGACGTGCTTACGTGCTTGCGTGCCCAAAGTTTTGACGTG
CCCTCGAATTTTGACGTGCCCTCCAATTTCGACGTGCCCTAAAATTTCGG
CGTGCCCTCAAATTTCGACGTGCCCTCAAATTTTAACGTGCCCTCAAATT
TTGACGTGCCCTCAAATTTTGACGTGCCCTCAAGTTTTAACGTGCCCTCA
AATTTTGACGTGCCCTCGAATTTTGACGTGCCCTACCTTGATGATTCATT
ATCAGAAGACATTTCGTCCCTCTCCTATGANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTTCCTCGTTTTGCACACA
AAAATCGCAAAAAGTCGACACAAAAGAGTAAAAATCAAAAATCACCGTAT
TTACTCATCATCATATTGAGTACACCACACGCTTTACAGCTTTTAATAAG
ATTGTCCTTGAATATATTTGCGAAAGCCATCGCTTTCGAATGTCGCTTAT
TTACACATAAGAATATCGTTGATTTACTATTTTCTTTTTGATTAAAAGTG
CAGACACAGACAATTTGTATAAGAAAATGTAGTGTTTAAAGAAACAAACT
TTTCTTTTTGGTCAGCGGATTTAAGATTTTCAGCGTGACTGACTTTATGA
TGTTTTACTTAAAATGTTCTCCTTAAAGTGGAGACAACATACACCATTTT
TTAATACAAATTTCCAAAAAATTTGGCATNTATGAGAAGAGAGTCTGCTA
AATGACGTGCCCTACGTGCCCACGTGCCCTCATTTTTTTGACGTGCCTTC
GTGCCCTACGTGCCTTACGTGCCTTCGTGCTCGCGTGCCTTANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGTGCAAAATTTCAAGT
TGTATTTCAATGTGATGCTTAAGATTTGAAGGGATTTCTAATGCCATACC
TCTATTAAAATCTTAAAAAATTCCTTCCTATTTCATAAAGTTCTTATAAT
TAACACTATATACCCTAATTTGAAATAAAAAGAGAGCCAGCTGATAAAAA
GTAAATAGCATGCGTCTCACATATTTTCTCTTTTTTTCAACCAATCAGAA
AATTTCTTTATTTAGTTTTGGCTGATTCGAAGTAATGCTTAACCATCTCT
TTCAGTGTTTCTTGCTAAGCAGACATCAAAACATCTTCTTCATATTTTTT
TCTTCCAACTTTAAAACCCCAACCTAGTGTAGTGTATAATTTATCATAGT
GAAAATACTGTTGTCAATTTTGATAATACGTTAAAATTTTAGGGCACGTC
GAAATTTGAGGGCACGCCGAAATTTTAGGGCACGTCGAAATTGGAGGGCA
CGTCAAAAGAGGGCACGTCAAAATTGGAGGGCACGTCAAAATTTGAGAGC
ACGTCGAAATTCGAGAGCACGTCGAAATTCGAGGGCACGTCAAAACTTGA
GGGCACGTCAAAACTCGAGGGCACGTCAAAATTTGAGGGCACGTCAAAAC
TTGAGGGCACGTCAAAACTTTGGGCACGCAAGCACGTAAGCACGTAGGCA
CGTCGGGCACGTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGCACGCGAGCACGTAGGCACGTTGGGCACGTAAGGCACGC
GAGCACGAAGGCACGTAGGGCACGAAGGCACGTCAAAAAAATGAGGGCAC
GTGGGCACGTAGGGCACGTCATTTAGCAGACTCATGAGAAGAATACATGT
ACACAATTATTTTGTGGTGATTTTTATTATTATGCCAACACTTATATGTA
AAAGCTTACTATTTATAATTGATATTCTATTATTTCAGTTTGATGTTTTG
TTTTTTGTGTGTTTTGTGCAACCTGACAGAATGTTTCCAGGCTCGTGATT
TGGAGGTATAATTAATGTAATTCAATGGTAATTGGTAATTCATTAATGTT
CTCCCAAAAAAGACAGCCTTGACTATTCCTATTTTTTTTCGCCCCCGTTG
AAGTAATTTAAAATCACAATCGGAAGGAACTTGCCTAACGAGCACCTCAC
CAAAAACTGGGATTTTTCATCCCGTTTATTAGTGAGTTCCACTTTAATGA
TTTTCGAAAAATAGAAGCCTTTCAAGCGCTTTGACGCAAATTCGACATTT
TTGCTACTGCAACAGCTCCGAAAGTTTAAAGTGACTTAAGAAAAATCGAG
AAAACACCGTGACGTCTAGTATAAGCTTGAACATGCCAAACATTTTCAAT
GGGTATGTACGGTTCTTGCCGAAAAATGGGAAACGATTAAAATCATTTTT
CCAAAAAATATTTTTATTACCAATGTGAATTGGGACAAAGAAATTCTTCT
TATTTTATCTACTCTCTAAAACTCTAGTATGAGTTTTGAGGATTTTACTC
TTTATTAAATTTTTTCTGTTTTTTTTCCGGACACGGTGTATGCTGACATG
TCTTAAAAGTTTTTAATGATAAACTGCGGGGCCAGATTTTCACAGGCTAA
AACATCCGACAAAAATTTCCATTTTTGGCTTTATATGTATACTTTAAACG
TCAGTAAAAATTTCGCGATAGTTGCTGATGATCCTAAATTTTTCAAATAA
AATTTATTCCACACATGCGAGATTTATTAAAACTGACTAACGAAGTTGTC
TGGTCGCGAATGTGTCTGACATTAAGGTATTGTAGTTGAAATATTTTTGT
TATTTTTTGATTTGATATAAAAGGTTTTTGTAATTTATAGCATTCTTAAA
GATTTTGTAAATACTGGTTAGATTTTAGTCGATCTCCTTTTTTGTGGTTG
CTATAAAGAAATAAAAAGTTCTTGTTTTTTATCTTAAAGTTTTTAGCTTT
TGTTTTATGCGGTCGATAATAGTATTTCAAAGAATTAGTTTTTCTAATCG
AGTCTCATGTTCTAATAACAAAGCGTGCACTCTTCGCTAACCAGGCTTAC
CATATTTCATCTTCACTTTTTATTCAATATTTACATCAGAACTAATTTCA
AAATTTTGGTAAATTTATCCAAAATCTCCATGAACGCTTCAAATTCTGCT
TAATGTTATTGCTGTATTATTTTTAGATGACAAATTACAAAAATTATAAG
AATAACAAAAGTGATAAACTTAGATGTATAAACCTCTAAAGGTTGGTACC
AGTATGCCGTAGATGGCCAAAAGCAGAAGGAAAATTGGAAATAGTTAGGT
TTTTCAGAGGAAGAATGTCTTGTTTGATTAGAAATAGTTTGGTTTTTCAG
AGGAAGAATGTCCTGTTTGAAGGAAACCAAATGACCAGTAAGTGCTTACA
TTGTTAAAAATTCTTACTTTTTTAATGACCAATAGAAACTGATTATAAGA
GATATTTTTCCAAATACATACAGTATATGGCCCCCAAAACGGAGGTCGTC
ATTAAAATGAAGATTCTGACTTGTAGATTTATCAGAATTAAACGATTTTT
GTTTATTTTGAAACAATGATGGTTATACTTAAAAATGAGCATGCTTTTGC
TGGTTTGAGACATATTCAAAATAACATATTTGCGTCTAAAGGAAATATTT
TAACACCAAAATTATATAAAAATTGCATATAACTCACTCTAGCTCCTTGG
ATATTGAAAATAAGTTATGAAAACGGGGTATAGGAAACTTTCTACACCTA
ATGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNACTTTAGAGGCTGGGTAAAAGATATAGCATCTTGAAGGTCAACCA
GTATTTTGGAGCCCTAGAATCAGCATTGACAAAACCGAAAATTCTAAATA
TGAGAGAAAGCAAAAAGTCTTGGAATTCTATTCCTATCACCTTGAGTTAA
TAGTTTATGACAGAAAATTAACATTATATATGTAATCGTCAGCCGTGCAA
AATTACTCGAATCTGATTGGTTTAGAGGAGTGCAATTAATCGTTAATTGC
ACTATTACCACTTTTTGCACTCTTCGGCGGGGGGACACTTTTGTCCCCTT
ATTCTTTTCTCTCCAAAGTCCTGTGTCAGAGACTTTTTTTACTATATAAT
AAAAAACAAAGACATTTTTTTTCTTCAATATAAAAAAGAACAAAGAAATT
TTACGTTACAATGGCTTCTTTTAATTGAAAACAAAGAAAAATTACACTGC
AATGTTTTCTTTTTAAACAAAAGAAAAAAAGGAGGTTTTCGAATGTTTAC
AAAAAAAAAAGTTAGAAAAAGATTCTTGTTCAAAACTTTTTACTGACGAT
TACCTCGGAATCGTATGTTTTGTCGTGCAATTAACGATTAATCACTCGTA
ACAAAGGAGAAAATACCGTAATTTGCACTCGTCCTTCGGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACTAGTACTAATCGTC
AGCCGTGCAAAATTACTCGAATCTGATTGGTTTAGAGGAGTGCGATTAAT
CGTTAATTGCACTATTACCACTTTTTGCACTCCGCGGCGGGGGGAACTAT
TTTCAAAAGAGATTCGTTTTCAAAAACTTGATTAAGACGTTGTTAAAGCA
AAATTGTCATTTTGAAAATTTCTAAATTTTCAGTTTGGACTTTGCAATAT
CGAAAATCTTGAAATATTTCATAAAAATCATAAATTTTACATCCATTGGG
TCGTAAATTTAAGGGAAAACACAAATATGTTCATAGTTTTCACCCCTTTT
ACCAGTGGGCTTAATAATTTGATTTTAACTACACCTCCGTTTTGGGGGCC
CCAAACCTGCATTTTGACAACCAGGGGCATACTGTAAAAATTTTATCANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGATGTTAAAGGTT
TTCATGCAGCAAAAATTTTTGTAAAATCTCTTTTTCTCTAGATTTGAGAG
AAATTTCAAATTTGATTGCCGTTTTGGGGGCCACATACTGTAGGGTCCTC
CAAAAAAAAAAATTAGGTACTCCCAATCATTTTGGTACCCCAAAATTTTT
AGAATTCTAAAGTTACCCCCAATTTTGAGTTACCCCCTTTTTAATTTTTT
TATTGTTAAAAATACAAAAAGGGATTTTTTGCTCTTTTGTTATAATTCCT
CGGAAAATACTTATATGGCGGCCAGCACTTCTTTTTCAACAACTTCAAGG
GTGTCATTTTTGACTATAATTTTCCAGGGTTTCAAGAGATTTTTATATAC
CACAAACTTTCAAGGGTTTCTAGGGTTTTTGGTTGATCTTTGCTAGTTTT
CAAAGATTTCAAGGAAATCTGTCGACAAAAGGAGAAAGGTTGAATTTTCA
ATTTTTGGGTAAAGGAGGGTCCTTAAATTGTCTGATAATTGATAATTTTA
CAAACACCCATTCTATCACCCAGACCTGCCAATCTCATATAATTCCAGTG
GCACTTAACGGGTTAAAAGGTAAACCCCCTAAGAATGAGTGTGGAATATC
CCCTTGAGTCTCAGGGGTTCCAAAAGTATGTTTTCTCATTTTTAAGTCAC
TGCGATGTTTGTATCATACGCAATGGGAAAGATTTTGTATTTCTGAAAGT
TAAGATGGCTGAAAATGGCCACAAAATTTGGCATTTCAAGGGTTTCAAGG
GTATAAATCTTGCATTTCAAGGGTCCTCAAAATAATATTGACTTTTCAAG
GGTGTTTCAAGGGTTTCAAGGAATTCAAGGGTGATGACTTCATACAGGTA
CCCCCAAATCTCTGGGGGGGGGGGGGGGGANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGTGGATCCTATGAAA
TATTTTATATTCTGTCCGACATAGCTATAACCTTTAAGTTTTTAGATCAA
TGTATTTGCTTCACATGACTTTTAGGCTAAGAAAGTGACCAAATTTCAAA
AAAATGACCACATCCAATCGTCAACAAAGTTCTGTTTCCTAGTTAATCGA
TTTGAAAGTTTTACCTGTGGCACATTTTTCTTCAATTCTCGGCTTTGATA
AAAATTTTTTGGACAAAATCCGATATTTGCAACACCCTATAAAATTCTTT
CTTGCAAGTTTATCAAAGACGAATTTCCCAATTTCATATTTTAGTGACCC
TGTGAGAAACATCCACAATAGGAAAATTAAGACTTCATCAGCTATGACAA
AAAGTTGTTTTTTGGGCATTTTTCAAAATGTCACACTATTTTTGATTGGG
ATCAGCCGCTGTTTTAGCGGTGGAACGGATGCCGAAAGGAGTATTTTATC
GTTTCTTGCCTTTTGCGTCGTTAAAATTTTGACCACCTTCAGGAACACTT
TGCACTCTATTGGTTGAATTTCTGATTTTGAAAAGATTCTTGAGCAATTC
TCGGGTCAGGCTTCCATCATCCCTCGTTTTGTTATAAAACAACTAGTTTA
CTTCTCAAGATAAGATGTAGTCTGAGAAAAATTCTAATTCGTTAGTGTGA
GATCTGATATCGGCTATAAAATGCTAAAAAGTATTAATATTGCTAATCAT
TAGTTTAAACTGAGAATCCCCTAATGCTTGTTAAGCTTCTGTGCTTTTTT
CGAAATGATAATTCAAGGTTACAAAAGTTCACTAATTGAAATATATCATA
CATTATCATAAATTCAGTTTCGAAAGCTGTTAATTTTCAACTGCTGCTGT
ACATCACGTTAATTTACCGTTCAAGATCTTTTTTAAAGTACGCAAGAGAA
GGTTATTCTTGTTATTATACGAGTGTTGAATTCTCGGTAGGCCATAATCA
AAAGCATCGAAATCTTCTTTGTAATATTTGTAAATCCCTAAAATATCCTT
TTCATCTAAAGTAGAGAAGAGATGGAACATCAAATCATTCGAACTGACTT
TATAGCCATCGGTCCAAGTTTTGGGGAACTTATGAACGGAATCTACACGT
CGCACCACTTCCTTTGCATCTCTCAAAAGTGATTCCATCTTCCCGATAAA
GTTATATCGGATTTGACATGGGTGACATAGTTTGGTTGCAGGGTACCAAT
GCGGGTCATATGGTTCGACCTGCACAATCCAGCGAACGAATTCTTGAAAA
GTTGCACCGCGTCCGCGATTATATTCCTCTTTACTCAAATCTTTTCGAAA
CATTTTCAATATTCTTGACCCGTACGTTTTTTCAAAATAAGTATTGTTAT
CCGCGAACTTATTCCGGTATGCAGATGCTAATCTTTCAAAAGGGTGTCTT
ACGAACATAAACTTGAAAGAGTCTTTTATAACTTTTGGCATCGCGTGTCC
CTTGACATGATACAAGGGTCGAAGACCTCGTTGCGTATGAACCTTCGATT
TGACACCCATTTCACTAATGTTTGACTTTATACCATCGAACAAAAGTAGC
ATTCTCTTCCAGTTCGTACTAGCGACTTTGGGTACGGCGCAATAGAGCAC
CGGTAGAACGCGACTAACGAATATATGTCCCTTTTGCTCTCGCTCAAGAA
ACCTCTGCTGTATGAATGTTCTGAGACTCGTACCGCCATCTTTTTTCCGT
TTAGCTTGACAAAAATGTCGGAGGTAATTCAATCGTTGCTGCTGCACTGG
ATTCGGTATGAACTGGAAGAAGATAAAGAAGAAGGTAATTTTATAATTTT
CTCGATACAAGTTTTTTTATAAGAACATCCAGAGTCGTTGAAGCCTTCTT
AACTTTTTGAGTTATAAGCCTTGAAATGTTCTTAACATGTTCTTATTTTC
ACCACTTGTGAGTAGTTTTGTCTATTTTCCTAAGAAATCGGGTGTTTTAG
AGTCTGCGAAATCAAATCCTTTTAAAGTTAAAGTTTCTGATCTAAAGAAT
AATTCTTGATATTTTTTTTCGAATTAANAAGGTAATTTTATAATTTTCAT
GATACAAGTTTTTTTATAATAACATCCAGAGTCGTTGAAGCCTTCTTAAC
TTTTTGAGTTTTAAGCCTTGAAATGTTCTTAACATGTTCTTATTTTCACC
ACTTGTGAGTAGTTTTGTCTATTTTCCTAAGAAATCGGGTGTTTTAGAGT
CTGCGAAATCAAATCCTTTTAAAGTTAAAGTTTCTGATCTAAAGAATAAT
TCTTGATATTTTTTTTCGAATTAAGTAAAAAGAACAACATTTGTTAAAAA
TTGAAGCAGAAGCTTTTCGGTCTTATGCCATCATCAGTGCTATAGATAGT
AAAAAAATTTTCGAAATTTCCACCCTTTTTACAATTCATGACGTCCGATT
TCGAAACGCCCAATACAGGTCTTTTTCAGTTCTTTTGGTGTCTCTCGGTC
TAGCATACTAGGAGCACTCGTGGTCTTTCTGGCCAGGCTAGAATTTCTTG
AAGGGGATATATGTTATCAGTAAAAATAAGATGACTAAAATAATAGATTA
GATAATTTTTCTTTACATTTGGATAGTGCTTTATGTAAAATATTTAAATA
ATTGAGGCCAATGTTTTTATCACAATTCTATTCGTTTGTTATTGTCACTT
TAAAAATTTGACACTTTCAAAAAATAATTGATCAATCAAAACTTGTTGTC
AACAATGTCATTCATAGTTTACATGTGGTTCGCCTCGTGCACGCGCGTGA
ACGAGTCATTTATTAATTTATGATAATTATTTGCGTGTACAAGAGGGACA
CGTGTTATGCTTAGAGACGTTCCTTGATTGATTCATTTTTAAAAAAAGTT
CAAAAATTTGATTAGAGAAAATTTACACCTTAATTAATTAGTTTTGATAG
ATATTAAAAAACAAAATAACAAAAGATAGAAAGAGGGGATAAATTTTGAC
AGAAAAATTTTATATTCTTTACATACATCACGGCTACTGTCGTCTTGAAC
AAGAGCTCTATTACGACTCACAAATCGTGTGCCAGCGGGATATAATTGAA
ACGCACAATACAGAATAGTAATACCAGTCAACAAGGAGAAAAGAAAGAGA
GCTGCCCAGCTAGACATAACTCACTTCTTCTCTACACTATTGTTTTACCT
CAATGAAATAATGCATCAAAAGTATCTGACACTCGATGTAAGAAAAGAGG
AAATGAAAGCGAACGAAAATGAAGAATAGCGTTACAATAGTTTCTTCACA
CTACCCTCTTTGTTTCACACCTTTCAATCGATCAGCATGCCTGTGAAACT
TTGAAAAAATATCAAACTCATTCAAGTGCATCATGAATTATCAATAACGC
ATTAATTTTTCAAAAATCATCTTCGAAAACATCAATTCATCAAAAATAAA
GACTTCTCTTTCATATGAGCTCATTATTAATACATAGTTGTCCTTTTTCA
CCAATATTTAAAACAATGACAATATATAATAGTCATCTTTCTGGGGAAAG
GCTTTTCTATTATTGATTTTACTTTTGATCCCCGCGTGACAGTGTTATAT
TTTCAAATTTTCTAAAATGTCAAAAATATTCGAATGACTAAAAAGTCTTT
TTCAATGTCACTTTCATTTTTCTAAAAATAAAGACCAGATTTTTCTTGAA
AATGAAGAATTCGATCTCTTTAGGCTCCATATAAACACGATTGATATTTT
TCAGCCATATTTTTTTAGGGCTATGGCCGCCTCATTTTTTCAAATAAAAA
AGTATTTTTAGAATATCCGGATTCATACTTTCAATAGCTTCATCTCAGGG
CAAAATCAGTCCCAAATCGGACCATTTTAAGGTATATTAGTGGGGTCAAT
TTCAGTCGGCTCAAACCATGGTTGCGCCTACTCAGTCAGTATGTTTTTGG
TCATTCTACCTCCAGATCATGGCGCGGGCCCTATATATACTCATGTACTT
TGCTTCATAATCACACGATGAGTTATTATTTCTTATTTGGCGCGCCTTCA
AAGAGAGCAATTAATCGTTAATCACTCTCTTCAATGACGCGCCAATGTTT
ACAAAATCGTGATTTTAATGTTTTTTCTTACTTTTTTTATCGAACGATTT
AATTGCATTCGAAATTAATTTTGTGAGAAAGAAAATCTATAAACAACAAT
AAAAGAAAAACAATAAAAAAAATATAAAACTTTCAGTGTAATTTACTTTC
CTAACGGGGAAAAAGTAACGAAACCGATCGAGCGATTAGCTCGTAAATAA
ATGATAACTCGTACAATTCGAAAATTGCACTCGTGATTTTTTGTTTCAAA
TTTTTAATTAATTTTTTAATTAATAACAAAAAAATCACTCGTGCAATTTT
CTCGAATTGCACTCGTACATGTGATTACATATACATACCATGCTGTTCTT
AGTTTTGGCACTTTGAGATCTTCGAAGTGCGAGCTATTAAAATCCTGTTC
TTATTTTAGGTCAAAACCTTAGGCTACTAAAATGCTTGAAACTCCCATTT
CTTGCTTTTCTTAATTTGATCTCATTTTTGGTGTTTTTAGTCTCATTCAT
TGTTCTTTTAAAATTGTTTTTATAAAAAAGGAGTAATACCATATCACCAC
AGATTTTATCATTGTAAGCAGTATAATTTTCTTTACAGGGTCAAATTCGC
TAAACATGGCACCATAAAAGATGGAAGACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033754XLOC_033754Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053470-exon-scaffold_231-1575043694:285977..286409TCONS_00053470-exon-scaffold_231-1575043694:285977..286409Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1575043694:285534..285712TCONS_00053470-exon-scaffold_231-1575043694:285534..285712Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1575043694:285173..285200TCONS_00053470-exon-scaffold_231-1575043694:285173..285200Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1575043694:284824..284917TCONS_00053470-exon-scaffold_231-1575043694:284824..284917Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1575043694:283194..283302TCONS_00053470-exon-scaffold_231-1575043694:283194..283302Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1575043694:282437..282472TCONS_00053470-exon-scaffold_231-1575043694:282437..282472Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1575043694:273576..273655TCONS_00053470-exon-scaffold_231-1575043694:273576..273655Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1575043694:270680..270721TCONS_00053470-exon-scaffold_231-1575043694:270680..270721Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1510915933:285977..286409TCONS_00053470-exon-scaffold_231-1510915933:285977..286409Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1510915933:285534..285712TCONS_00053470-exon-scaffold_231-1510915933:285534..285712Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1510915933:285173..285200TCONS_00053470-exon-scaffold_231-1510915933:285173..285200Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1510915933:284824..284917TCONS_00053470-exon-scaffold_231-1510915933:284824..284917Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1510915933:283194..283302TCONS_00053470-exon-scaffold_231-1510915933:283194..283302Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1510915933:282437..282472TCONS_00053470-exon-scaffold_231-1510915933:282437..282472Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1510915933:273576..273655TCONS_00053470-exon-scaffold_231-1510915933:273576..273655Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1510915933:270680..270721TCONS_00053470-exon-scaffold_231-1510915933:270680..270721Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1491911889:285977..286409TCONS_00053470-exon-scaffold_231-1491911889:285977..286409Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1491911889:285534..285712TCONS_00053470-exon-scaffold_231-1491911889:285534..285712Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1491911889:285173..285200TCONS_00053470-exon-scaffold_231-1491911889:285173..285200Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1491911889:284824..284917TCONS_00053470-exon-scaffold_231-1491911889:284824..284917Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1491911889:283194..283302TCONS_00053470-exon-scaffold_231-1491911889:283194..283302Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1491911889:282437..282472TCONS_00053470-exon-scaffold_231-1491911889:282437..282472Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1491911889:273576..273655TCONS_00053470-exon-scaffold_231-1491911889:273576..273655Clytia hemisphaericaexon
TCONS_00053470-exon-scaffold_231-1491911889:270680..270721TCONS_00053470-exon-scaffold_231-1491911889:270680..270721Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_231supercontigscaffold_231:270680..286409 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.624014	0.320986	0	0	0.438011	0	0	0	1.47969	1.19763	0.533351	1.32467	1.82881	0.669345	1.06901	1.22004	1.52282	2.34965	1.09746	1.2414	0	0	0	0.350746	0.737545	0	0	0	0.303933	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053470 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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