TCONS_00053457 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053457
Unique NameTCONS_00053457
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3924

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053457 ID=TCONS_00053457|Name=TCONS_00053457|organism=Clytia hemisphaerica|type=transcript|length=3924bp
GAAACGTTCTGGAAGACGCgcaaattgatgaaaatatatCATGAAATTTC
AATTTGAGAATAAAATATATGTAATAAGAAAATGAGATGTTGAATAAAAT
GGTCCACTGTTTTATTGCTGTCAAAATGGTCAGAGGTGACTGAAATGAAC
ATGATTCTTAGGCGAGCAGCATGTTACTCTTTGTCCATTCCTTATCTTTG
TTTCTCCTCCTTTCAACATGTCGAATCACGTGCCAACAAGAAAGCCTTTC
AAGCTCACCAACATTGCTCCAAGAACAAGAGAGTTATAATGAGTTGGAGC
AAACCCTCGAAAATTACGACGAGAAAAGTGACAGCGCATTGATCGTCATT
GATACCGAACAAGAGAATCCGATAAATCCGATTGTGGAAAAACGGTCTTC
AATTATTCAAAAACGAAGCAGCGAAGATTTCGATGAAGGGTTTACGATTA
TTATTGATCGAGAATCGTTGGAAGAAAATGCCGTCCAAAAGGATGAGGTT
TATCAAGATATGGAGAGAAGTTATGAACAGATTCAAGAGAAATTCGTGGA
TGAGATCAAACAACCGATCAAAGATAAACACGTGCGGGTAATCGTGATCA
CACCTAAAGATCAGATGACCAGAAGTGTTGATGACCCACATCAAGAAGAA
ACAGACTCGACACCTCAAACTGAACTGGATTTAGATATCGCAAAGTTACA
ACAAGTTCGAGATAAGATGAAGAATTTGAATACTGAAGATAAGAATTTGA
TTAGAGCGGTTTCTTCATCAAGTCAAGAGAAGAGTGAGACAACCAAAGGA
ACTTCTGCAAATTCTGCTGAGATTAGAACTGAgaaacaaagtccaaaaaa
accatTCGAAAAGAAACAAGCAATCAAGCAGCAGAAAAAAATCGCTAAAC
CGGTCgctaaaaacattcaaaaacagaaaaacaaaacgaaaaacaaaaca
ttgaCAACGAATAaggttattcaaaacaaacaacCTGGACACGTGATATT
TACAACTGCAACGAACAATAAATCATTGACATCTAACAACACAAACAAAA
CAATAGTTATATCTTCTCTTCACCATATGCCACCCACCAACCCTCATCCA
AAACATTACACCATAGAAGAACATTACAAGAAAAAGACAGAGTTCCACCG
CACTGGAGACAAAAAATCATCATCCACTGACGGCCAACAAAAAGGTGAAA
CAGAAAACGATAATAGCGATGACTTGGTAATTTCCAGACCAAAACTACCC
AACAATTTTCGACTCACAAACAACACATGGTCAGATCCAGATTCGGTGGA
TAACGCAAATTCATCCATCCCCAGTATCATGGAAGAAAACGCGATATCCA
CAAACAATGAAACCGCTTCTACAAAACCAAAACAACAATCATCAAATACA
AATATTCTAAATGGTGTAAAACAACAGCAGAAGCCAAGCTTTGATCCAAC
AGCCAAACAGCAAAACCAATCTTTTGCAGTTACTATATCAAGCGCTCTAG
AATCACAGCCAAACATTTCAAACTCAGGGAACTTGATGAACTTACTTGCT
TCATCAAATTCTAAACCCTCAAACAAAACTAAAGTCATTAATATTGAAAA
AGCCAAGGCTATCGTTCAATACCTAAACAAGGACCCTTTAGAATCTTGGC
GATATCCATACAAAACACTATCTTCTCTAGACTTGAATGCCATACTGATT
CGTTCAGGACTTGTTTATCCGGGATACATAGAGAGATTAAAGGGTGTGAT
GCGAAAAGCTATTACAGGTCATGATATAACATTGAGTGTAGTTGGTGGCT
CCATAAGTGCTGGTGGTGGGTTATATAAAGATCGTGGAAGCATAGAAGGA
CTTTATTATAAGGGCGTAGTTGATTGGTGGAACCAATGGATTTTCCCTGT
CACTGGTTCCAAAATGAAAGTAAACAATGCAGCCATTGGTTCTATAGGGA
CagattatttttcatattgtgTCAAAAACCACCTGAAGAAGAATGTTGAT
TTAGTCATATGGGAGCTTTCAGCTAATGATTATAATAGATATAAAACGTT
TCCCACGAAAGGTGCAAGGCCGTTAGAAAGGTTCACTAGAATGATTCTTG
ATTTACCAACGAAACCAGCATTACTTTATCTGAATTTCTTTAAAGGGATC
GATTATAAAAATTCTGGTTTATCAGATTGTCCGAACTTTGAAGACCAACA
AGAACATACTATAGCGAGTTATTATAAAGTACCTACATTGAGTTGGAGAG
CCATGGTTTGTAACGGCTTAGTTAAATCCAGACCAGGATTTCTATTGGCT
GATTTATTCAGTGTTGACCAATACCATCCATCTCTTAAGGGGCATGCGCA
ATCAGCATTATTGATATTACTTCATCTGCGACACGTGATGCGAGCTGTTT
TACAATACGCCATAAAACACGATGGTGATATTGTCAATTTTCAGGACCAG
TATTTGTTACCAGACCCCTTATTCATTGGCCCAAAACATCCAGAACCATA
TTGTTGGACCTTGATACGACCCGATGAAAAAGATCCAGTCCATAACACTT
TGGAGGTGAGCGTGGCTTCAAATGATGGCTTTAAAATACAATATGCTACT
AACTTTCCAATTAGATTTGATAAAGTTATTTGTTATAAATCTGAGAAAAC
GGATAAACCGACATCCTCTCTGAAGCTCGTCTTTACCATTCCAAAATCAC
CTGAAAATAAAGATAAACGATTTGAAGTTGCCATAACAACGCATTCAAAA
TGGGGCGGCTCTTCAATGATCTGGATAGATGATAAAAACGATCAACCGGT
TTTCATCCAAGAAGGAAAGCCCGGTGACCCTGGACGTCGGACACAGGTTG
ATACTGTTGCTAGTGATGTGACTGCGGGAactcattttttgaatttatgg
TCGAAAGATGGAGGTTTTTGTTTAGCTGCGATCATGATAGATGCTAGTTA
ATAGTTTAATCACTGAAAAGTTTGTTCACTTTTTCTCGAAAATATGGATT
GGAAAAAATGCCTCGTGATAAGATAAagttatcttttttaaaaaacaatt
ttcctataaaaatttctgtacaaatttttttaataaatagtGGGTTTTGt
aaatacaaaattattttaaatagTCAATAGAGATTTAAGATAATCCTTAT
TCAAAGTAAGGAAAACAAATCTAGAGAAACAAAACAAGTACAATATCgtg
aaatattttcagttttatgtaGGTGAACACATGCCAGGTCATTGGTATCA
CTCTCTGTAAAGAAACGTTATACCAACTAGTGATAATTTGTATGGATATA
CAAAACATTGAACAGTGAGCATAAAGTTGAAATGATTAAAACAGGAAACC
CTAAAACCCTTTAGTGACTACCCGTAACAAATGTGACACTCGTTAAGTTG
TAAAAGCACTGGGACACGTAAAATAAAAGAGCACGGATAGGCTTACAAAA
CATAATATCAACTAATTGAATCTTGTTTTTGGCTCAAATATTCCCAAAGC
GCTCAGTCACATTTTGCATCTTTATAGCAAAATCGGAAAATTCCTGTGAT
CTAATCCCGAGAAACGGACATAGATTCAACGGCGGTAGAATTTTCAATGG
AAAATACGGTTCGATGACTGGTCAGCAGATATACAAGAACAGAATCAGCA
ACAATGCAATACTCCATTCGCATTCATCAATAGGCCAGCGTCCGATGACA
ACCTTTGACGAACTCAACGTAATGTGGTtctaaaaggaaaatgaaagaaa
aatgtttccttgtttttcctTGTCTTCAGCCCTCAATCGCAGGACCCATG
TTTACAAGAATGCTTTCAGTTATTAGCTTACAAATTAGCTTGATTTTGAC
CTTTAGtattgggttttcaaaagtaaaactttCAACCATCCGGCTATTTg
gtagtttgaaattttcaaatcttc
Run BLAST on NCBI

protein sequence of TCONS_00053457-protein

>TCONS_00053457-protein ID=TCONS_00053457-protein|Name=TCONS_00053457-protein|organism=Clytia hemisphaerica|type=polypeptide|length=926bp
MLLFVHSLSLFLLLSTCRITCQQESLSSSPTLLQEQESYNELEQTLENYD
EKSDSALIVIDTEQENPINPIVEKRSSIIQKRSSEDFDEGFTIIIDRESL
EENAVQKDEVYQDMERSYEQIQEKFVDEIKQPIKDKHVRVIVITPKDQMT
RSVDDPHQEETDSTPQTELDLDIAKLQQVRDKMKNLNTEDKNLIRAVSSS
SQEKSETTKGTSANSAEIRTEKQSPKKPFEKKQAIKQQKKIAKPVAKNIQ
KQKNKTKNKTLTTNKVIQNKQPGHVIFTTATNNKSLTSNNTNKTIVISSL
HHMPPTNPHPKHYTIEEHYKKKTEFHRTGDKKSSSTDGQQKGETENDNSD
DLVISRPKLPNNFRLTNNTWSDPDSVDNANSSIPSIMEENAISTNNETAS
TKPKQQSSNTNILNGVKQQQKPSFDPTAKQQNQSFAVTISSALESQPNIS
NSGNLMNLLASSNSKPSNKTKVINIEKAKAIVQYLNKDPLESWRYPYKTL
SSLDLNAILIRSGLVYPGYIERLKGVMRKAITGHDITLSVVGGSISAGGG
LYKDRGSIEGLYYKGVVDWWNQWIFPVTGSKMKVNNAAIGSIGTDYFSYC
VKNHLKKNVDLVIWELSANDYNRYKTFPTKGARPLERFTRMILDLPTKPA
LLYLNFFKGIDYKNSGLSDCPNFEDQQEHTIASYYKVPTLSWRAMVCNGL
VKSRPGFLLADLFSVDQYHPSLKGHAQSALLILLHLRHVMRAVLQYAIKH
DGDIVNFQDQYLLPDPLFIGPKHPEPYCWTLIRPDEKDPVHNTLEVSVAS
NDGFKIQYATNFPIRFDKVICYKSEKTDKPTSSLKLVFTIPKSPENKDKR
FEVAITTHSKWGGSSMIWIDDKNDQPVFIQEGKPGDPGRRTQVDTVASDV
TAGTHFLNLWSKDGGFCLAAIMIDAS
Run BLAST on NCBI

transcript from alignment at scaffold_231:226363..230840-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053457 ID=TCONS_00053457|Name=TCONS_00053457|organism=Clytia hemisphaerica|type=transcript|length=4478bp|location=Sequence derived from alignment at scaffold_231:226363..230840- (Clytia hemisphaerica)
GAAACGTTCTGGAAGACGCGCAAATTGATGAAAATATATCATGAAATTTC
AATTTGAGAATAAAATATATGTAATAAGAAAATGAGATGTTGAATAAAAT
GGTCCACTGTTTTATTGCTGTCAAAATGGTCAGAGGTGACTGAAATGAAC
ATGATTCTTAGGTAAGATGAAATTGCTTTTGAATGGCTCATAATCATTTT
GTTCGAAAAAAGAGGAGAATAGCAGTCATTCTTTTTTATCAGAAACAAAA
ATTATTATTGGTTTGAATCTTGAACTATATAACACCCCTGTCTCACAACC
CGGTGAAAGTTTTTCCCTCAGGGGGGGGGGGGGAGTGAAAATTTCTATCG
AAATCCCAATGGTGATTATTATGTTGTTTCCAGCCCAAAAATTCCTATGG
GGATGGTTTTGGAGTGTGATTTTTTTAAATTTGACTTTAAGTGGGGATGA
AATCAAAATCAATTTCCCAGTGGGGCTGAAATTGTAGGATATTTTTCCCA
CCGGGGACGAAATTTTGGGCAAATTTTCAAGTGGGGCCTGGGTCCAAGCG
GCTCTGTGACACAGGTGTGTTATATAACTAGAGTGTCAAGGGAAATGAAA
TTATCCAACCAACCAAGTCAGATTTCTACTTTGGAAGTGTCAAGAAACCT
TCAAGCATAGTTAAAATACCGCAAAGAAAGATTGTAAATCCATTGTTTCC
TGCTTTATTTTTTAGGCGAGCAGCATGTTACTCTTTGTCCATTCCTTATC
TTTGTTTCTCCTCCTTTCAACATGTCGAATCACGTGCCAACAAGAAAGCC
TTTCAAGCTCACCAACATTGCTCCAAGAACAAGAGAGTTATAATGAGTTG
GAGCAAACCCTCGAAAATTACGACGAGAAAAGTGACAGCGCATTGATCGT
CATTGATACCGAACAAGAGAATCCGATAAATCCGATTGTGGAAAAACGGT
CTTCAATTATTCAAAAACGAAGCAGCGAAGATTTCGATGAAGGGTTTACG
ATTATTATTGATCGAGAATCGTTGGAAGAAAATGCCGTCCAAAAGGATGA
GGTTTATCAAGATATGGAGAGAAGTTATGAACAGATTCAAGAGAAATTCG
TGGATGAGATCAAACAACCGATCAAAGATAAACACGTGCGGGTAATCGTG
ATCACACCTAAAGATCAGATGACCAGAAGTGTTGATGACCCACATCAAGA
AGAAACAGACTCGACACCTCAAACTGAACTGGATTTAGATATCGCAAAGT
TACAACAAGTTCGAGATAAGATGAAGAATTTGAATACTGAAGATAAGAAT
TTGATTAGAGCGGTTTCTTCATCAAGTCAAGAGAAGAGTGAGACAACCAA
AGGAACTTCTGCAAATTCTGCTGAGATTAGAACTGAGAAACAAAGTCCAA
AAAAACCATTCGAAAAGAAACAAGCAATCAAGCAGCAGAAAAAAATCGCT
AAACCGGTCGCTAAAAACATTCAAAAACAGAAAAACAAAACGAAAAACAA
AACATTGACAACGAATAAGGTTATTCAAAACAAACAACCTGGACACGTGA
TATTTACAACTGCAACGAACAATAAATCATTGACATCTAACAACACAAAC
AAAACAATAGTTATATCTTCTCTTCACCATATGCCACCCACCAACCCTCA
TCCAAAACATTACACCATAGAAGAACATTACAAGAAAAAGACAGAGTTCC
ACCGCACTGGAGACAAAAAATCATCATCCACTGACGGCCAACAAAAAGGT
GAAACAGAAAACGATAATAGCGATGACTTGGTAATTTCCAGACCAAAACT
ACCCAACAATTTTCGACTCACAAACAACACATGGTCAGATCCAGATTCGG
TGGATAACGCAAATTCATCCATCCCCAGTATCATGGAAGAAAACGCGATA
TCCACAAACAATGAAACCGCTTCTACAAAACCAAAACAACAATCATCAAA
TACAAATATTCTAAATGGTGTAAAACAACAGCAGAAGCCAAGCTTTGATC
CAACAGCCAAACAGCAAAACCAATCTTTTGCAGTTACTATATCAAGCGCT
CTAGAATCACAGCCAAACATTTCAAACTCAGGGAACTTGATGAACTTACT
TGCTTCATCAAATTCTAAACCCTCAAACAAAACTAAAGTCATTAATATTG
AAAAAGCCAAGGCTATCGTTCAATACCTAAACAAGGACCCTTTAGAATCT
TGGCGATATCCATACAAAACACTATCTTCTCTAGACTTGAATGCCATACT
GATTCGTTCAGGACTTGTTTATCCGGGATACATAGAGAGATTAAAGGGTG
TGATGCGAAAAGCTATTACAGGTCATGATATAACATTGAGTGTAGTTGGT
GGCTCCATAAGTGCTGGTGGTGGGTTATATAAAGATCGTGGAAGCATAGA
AGGACTTTATTATAAGGGCGTAGTTGATTGGTGGAACCAATGGATTTTCC
CTGTCACTGGTTCCAAAATGAAAGTAAACAATGCAGCCATTGGTTCTATA
GGGACAGATTATTTTTCATATTGTGTCAAAAACCACCTGAAGAAGAATGT
TGATTTAGTCATATGGGAGCTTTCAGCTAATGATTATAATAGATATAAAA
CGTTTCCCACGAAAGGTGCAAGGCCGTTAGAAAGGTTCACTAGAATGATT
CTTGATTTACCAACGAAACCAGCATTACTTTATCTGAATTTCTTTAAAGG
GATCGATTATAAAAATTCTGGTTTATCAGATTGTCCGAACTTTGAAGACC
AACAAGAACATACTATAGCGAGTTATTATAAAGTACCTACATTGAGTTGG
AGAGCCATGGTTTGTAACGGCTTAGTTAAATCCAGACCAGGATTTCTATT
GGCTGATTTATTCAGTGTTGACCAATACCATCCATCTCTTAAGGGGCATG
CGCAATCAGCATTATTGATATTACTTCATCTGCGACACGTGATGCGAGCT
GTTTTACAATACGCCATAAAACACGATGGTGATATTGTCAATTTTCAGGA
CCAGTATTTGTTACCAGACCCCTTATTCATTGGCCCAAAACATCCAGAAC
CATATTGTTGGACCTTGATACGACCCGATGAAAAAGATCCAGTCCATAAC
ACTTTGGAGGTGAGCGTGGCTTCAAATGATGGCTTTAAAATACAATATGC
TACTAACTTTCCAATTAGATTTGATAAAGTTATTTGTTATAAATCTGAGA
AAACGGATAAACCGACATCCTCTCTGAAGCTCGTCTTTACCATTCCAAAA
TCACCTGAAAATAAAGATAAACGATTTGAAGTTGCCATAACAACGCATTC
AAAATGGGGCGGCTCTTCAATGATCTGGATAGATGATAAAAACGATCAAC
CGGTTTTCATCCAAGAAGGAAAGCCCGGTGACCCTGGACGTCGGACACAG
GTTGATACTGTTGCTAGTGATGTGACTGCGGGAACTCATTTTTTGAATTT
ATGGTCGAAAGATGGAGGTTTTTGTTTAGCTGCGATCATGATAGATGCTA
GTTAATAGTTTAATCACTGAAAAGTTTGTTCACTTTTTCTCGAAAATATG
GATTGGAAAAAATGCCTCGTGATAAGATAAAGTTATCTTTTTTAAAAAAC
AATTTTCCTATAAAAATTTCTGTACAAATTTTTTTAATAAATAGTGGGTT
TTGTAAATACAAAATTATTTTAAATAGTCAATAGAGATTTAAGATAATCC
TTATTCAAAGTAAGGAAAACAAATCTAGAGAAACAAAACAAGTACAATAT
CGTGAAATATTTTCAGTTTTATGTAGGTGAACACATGCCAGGTCATTGGT
ATCACTCTCTGTAAAGAAACGTTATACCAACTAGTGATAATTTGTATGGA
TATACAAAACATTGAACAGTGAGCATAAAGTTGAAATGATTAAAACAGGA
AACCCTAAAACCCTTTAGTGACTACCCGTAACAAATGTGACACTCGTTAA
GTTGTAAAAGCACTGGGACACGTAAAATAAAAGAGCACGGATAGGCTTAC
AAAACATAATATCAACTAATTGAATCTTGTTTTTGGCTCAAATATTCCCA
AAGCGCTCAGTCACATTTTGCATCTTTATAGCAAAATCGGAAAATTCCTG
TGATCTAATCCCGAGAAACGGACATAGATTCAACGGCGGTAGAATTTTCA
ATGGAAAATACGGTTCGATGACTGGTCAGCAGATATACAAGAACAGAATC
AGCAACAATGCAATACTCCATTCGCATTCATCAATAGGCCAGCGTCCGAT
GACAACCTTTGACGAACTCAACGTAATGTGGTTCTAAAAGGAAAATGAAA
GAAAAATGTTTCCTTGTTTTTCCTTGTCTTCAGCCCTCAATCGCAGGACC
CATGTTTACAAGAATGCTTTCAGTTATTAGCTTACAAATTAGCTTGATTT
TGACCTTTAGTATTGGGTTTTCAAAAGTAAAACTTTCAACCATCCGGCTA
TTTGGTAGTTTGAAATTTTCAAATCTTC

Coding sequence (CDS) from alignment at scaffold_231:226363..230840-

>TCONS_00053457 ID=TCONS_00053457|Name=TCONS_00053457|organism=Clytia hemisphaerica|type=CDS|length=2781bp|location=Sequence derived from alignment at scaffold_231:226363..230840- (Clytia hemisphaerica)
ATGTTACTCTTTGTCCATTCCTTATCTTTGTTTCTCCTCCTTTCAACATG
TCGAATCACGTGCCAACAAGAAAGCCTTTCAAGCTCACCAACATTGCTCC
AAGAACAAGAGAGTTATAATGAGTTGGAGCAAACCCTCGAAAATTACGAC
GAGAAAAGTGACAGCGCATTGATCGTCATTGATACCGAACAAGAGAATCC
GATAAATCCGATTGTGGAAAAACGGTCTTCAATTATTCAAAAACGAAGCA
GCGAAGATTTCGATGAAGGGTTTACGATTATTATTGATCGAGAATCGTTG
GAAGAAAATGCCGTCCAAAAGGATGAGGTTTATCAAGATATGGAGAGAAG
TTATGAACAGATTCAAGAGAAATTCGTGGATGAGATCAAACAACCGATCA
AAGATAAACACGTGCGGGTAATCGTGATCACACCTAAAGATCAGATGACC
AGAAGTGTTGATGACCCACATCAAGAAGAAACAGACTCGACACCTCAAAC
TGAACTGGATTTAGATATCGCAAAGTTACAACAAGTTCGAGATAAGATGA
AGAATTTGAATACTGAAGATAAGAATTTGATTAGAGCGGTTTCTTCATCA
AGTCAAGAGAAGAGTGAGACAACCAAAGGAACTTCTGCAAATTCTGCTGA
GATTAGAACTGAGAAACAAAGTCCAAAAAAACCATTCGAAAAGAAACAAG
CAATCAAGCAGCAGAAAAAAATCGCTAAACCGGTCGCTAAAAACATTCAA
AAACAGAAAAACAAAACGAAAAACAAAACATTGACAACGAATAAGGTTAT
TCAAAACAAACAACCTGGACACGTGATATTTACAACTGCAACGAACAATA
AATCATTGACATCTAACAACACAAACAAAACAATAGTTATATCTTCTCTT
CACCATATGCCACCCACCAACCCTCATCCAAAACATTACACCATAGAAGA
ACATTACAAGAAAAAGACAGAGTTCCACCGCACTGGAGACAAAAAATCAT
CATCCACTGACGGCCAACAAAAAGGTGAAACAGAAAACGATAATAGCGAT
GACTTGGTAATTTCCAGACCAAAACTACCCAACAATTTTCGACTCACAAA
CAACACATGGTCAGATCCAGATTCGGTGGATAACGCAAATTCATCCATCC
CCAGTATCATGGAAGAAAACGCGATATCCACAAACAATGAAACCGCTTCT
ACAAAACCAAAACAACAATCATCAAATACAAATATTCTAAATGGTGTAAA
ACAACAGCAGAAGCCAAGCTTTGATCCAACAGCCAAACAGCAAAACCAAT
CTTTTGCAGTTACTATATCAAGCGCTCTAGAATCACAGCCAAACATTTCA
AACTCAGGGAACTTGATGAACTTACTTGCTTCATCAAATTCTAAACCCTC
AAACAAAACTAAAGTCATTAATATTGAAAAAGCCAAGGCTATCGTTCAAT
ACCTAAACAAGGACCCTTTAGAATCTTGGCGATATCCATACAAAACACTA
TCTTCTCTAGACTTGAATGCCATACTGATTCGTTCAGGACTTGTTTATCC
GGGATACATAGAGAGATTAAAGGGTGTGATGCGAAAAGCTATTACAGGTC
ATGATATAACATTGAGTGTAGTTGGTGGCTCCATAAGTGCTGGTGGTGGG
TTATATAAAGATCGTGGAAGCATAGAAGGACTTTATTATAAGGGCGTAGT
TGATTGGTGGAACCAATGGATTTTCCCTGTCACTGGTTCCAAAATGAAAG
TAAACAATGCAGCCATTGGTTCTATAGGGACAGATTATTTTTCATATTGT
GTCAAAAACCACCTGAAGAAGAATGTTGATTTAGTCATATGGGAGCTTTC
AGCTAATGATTATAATAGATATAAAACGTTTCCCACGAAAGGTGCAAGGC
CGTTAGAAAGGTTCACTAGAATGATTCTTGATTTACCAACGAAACCAGCA
TTACTTTATCTGAATTTCTTTAAAGGGATCGATTATAAAAATTCTGGTTT
ATCAGATTGTCCGAACTTTGAAGACCAACAAGAACATACTATAGCGAGTT
ATTATAAAGTACCTACATTGAGTTGGAGAGCCATGGTTTGTAACGGCTTA
GTTAAATCCAGACCAGGATTTCTATTGGCTGATTTATTCAGTGTTGACCA
ATACCATCCATCTCTTAAGGGGCATGCGCAATCAGCATTATTGATATTAC
TTCATCTGCGACACGTGATGCGAGCTGTTTTACAATACGCCATAAAACAC
GATGGTGATATTGTCAATTTTCAGGACCAGTATTTGTTACCAGACCCCTT
ATTCATTGGCCCAAAACATCCAGAACCATATTGTTGGACCTTGATACGAC
CCGATGAAAAAGATCCAGTCCATAACACTTTGGAGGTGAGCGTGGCTTCA
AATGATGGCTTTAAAATACAATATGCTACTAACTTTCCAATTAGATTTGA
TAAAGTTATTTGTTATAAATCTGAGAAAACGGATAAACCGACATCCTCTC
TGAAGCTCGTCTTTACCATTCCAAAATCACCTGAAAATAAAGATAAACGA
TTTGAAGTTGCCATAACAACGCATTCAAAATGGGGCGGCTCTTCAATGAT
CTGGATAGATGATAAAAACGATCAACCGGTTTTCATCCAAGAAGGAAAGC
CCGGTGACCCTGGACGTCGGACACAGGTTGATACTGTTGCTAGTGATGTG
ACTGCGGGAACTCATTTTTTGAATTTATGGTCGAAAGATGGAGGTTTTTG
TTTAGCTGCGATCATGATAGATGCTAGTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033749XLOC_033749Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053457-proteinTCONS_00053457-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053457-exon-scaffold_231-1575043694:230680..230840TCONS_00053457-exon-scaffold_231-1575043694:230680..230840Clytia hemisphaericaexon
TCONS_00053457-exon-scaffold_231-1575043694:226363..230125TCONS_00053457-exon-scaffold_231-1575043694:226363..230125Clytia hemisphaericaexon
TCONS_00053457-exon-scaffold_231-1510915933:230680..230840TCONS_00053457-exon-scaffold_231-1510915933:230680..230840Clytia hemisphaericaexon
TCONS_00053457-exon-scaffold_231-1510915933:226363..230125TCONS_00053457-exon-scaffold_231-1510915933:226363..230125Clytia hemisphaericaexon
TCONS_00053457-exon-scaffold_231-1491911889:230680..230840TCONS_00053457-exon-scaffold_231-1491911889:230680..230840Clytia hemisphaericaexon
TCONS_00053457-exon-scaffold_231-1491911889:226363..230125TCONS_00053457-exon-scaffold_231-1491911889:226363..230125Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_231supercontigscaffold_231:226363..230840 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.218727	0.322411	0.160107	0.188441	0.170449	0.0532552	0.4356	0.391726	0.309066	0.676081	0.448455	0.532096	0	0	0.241153	0.286935	0.114952	0.21231	0.580936	0.454076	0	0.0179364	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013830SGNH_hydro
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053457 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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