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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053241 ID=TCONS_00053241|Name=TCONS_00053241|organism=Clytia hemisphaerica|type=transcript|length=268bp
GAAGCATCCTTTCACCATGATTGGTTGATTATGAGACAATGGAAAGGAGA
TTCCCTGTACATTTGTCATCAACTAAATTTGGTAACACTGCAACATGTTC
AAATAGTAGAGAGCTCTGAGTCtacatttgaaattattttcatatttctg
aaatcgaagaagtcGTTCTCTTCCTTTCATGAGCCACAACTTGTGCTGCT
GCTGAAAGTTTGagAATACTCGCCAATCATGAAGACCACACTTCTCATTC
TTCTGGTCTGCNTTTTTC Run BLAST on NCBI transcript from alignment at scaffold_227:414728..415869- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053241 ID=TCONS_00053241|Name=TCONS_00053241|organism=Clytia hemisphaerica|type=transcript|length=1142bp|location=Sequence derived from alignment at scaffold_227:414728..415869- (Clytia hemisphaerica)
GAAGCATCCTTTCACCATGATTGGTTGATTATGAGACAATGGAAAGGAGA
TTCCCTGTACATTTGTCATCAACTAAATTTGGTAACACTGCAACATGTTC
AAATAGTAGAGAGCTCTGAGTCTACATTTGAAATTATTTTCATATTTCTG
AAATCGAAGAAGTCGTTCTCTTCCTTTCATGAGCCACAACTTGTGCTGCT
GCTGAAAGTTTGAGGTAAAATCTTTTTTATTTTTATATGTCTCGTCATTT
CATTGATAGTGTTGGTAATGGGTTCTAAACATCCATGTATCAACTCTTTG
CGGGCCTTCCTTTGGTTTGAAAAGTCTAAGCCTGATAGTAGAAGTCCACA
TATTTGCGTTTGAAATAAAAACTCTTAAGGCCGGTCTACACTTTCGCGCG
AAATGGGCAACAATTTTTTTCTTAACCTTTTCTGCCTGAAGAAAAGATTA
CGTCATAAAAAAGTCTCGCACGAACAAAAAAAGTCGAAGGAAGTTCTACT
TTTTTCATCCGTTACGTCAATTTCGACGAATGGTTTTGCTTTATTTTTCA
ACCGACCAATAACCTTACAAAAACATCAAAAAGTTTTCGCTCGTGTCGTG
CGAAAGTGGAGAACGGCCTTTATACCTTGGGATTTATTTTTGAGCCTACC
AGGGTAGAATGATTTTAAATATTAGTGCCAATGCAATGACTTTATATTTT
TGACGTCATTCAACCCGGTAAAATCAAATCCAGTCTCCAACATGAAGCTT
TAAAGGGTTTTATCATTTTACATTATTGTCCGAAAAGCCATTGCCCTATA
TTAATTTTCTCTAAAATTTAAACATGTTGGTATCACAGATCCGCCTCCGC
TCCACTGGAAAATTTGCTATTGATTTTGTCTCTGGTGGAAAGTATGCCCT
ACAATTTCAGCCCGACTGAAAAATATTGGGAAAAATTCCACTCTAAAACT
ATCCCACTGGATTTTTGACCTAAGAACAATAGGATTTTTATTCCCGTGGG
GATTTCGATAGTAATTTTCATCCCACTGTGGGAAGATGTTCCACCGGGGC
TGTGTGACAGAGGTGTATTAATTTTCTTTTCGTAACAGAATACTCGCCAA
TCATGAAGACCACACTTCTCATTCTTCTGGTCTGCNTTTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053241-exon-scaffold_227-1575043694:415656..415869 | TCONS_00053241-exon-scaffold_227-1575043694:415656..415869 | Clytia hemisphaerica | exon |
| TCONS_00053241-exon-scaffold_227-1575043694:414728..414781 | TCONS_00053241-exon-scaffold_227-1575043694:414728..414781 | Clytia hemisphaerica | exon |
| TCONS_00053241-exon-scaffold_227-1510915933:415656..415869 | TCONS_00053241-exon-scaffold_227-1510915933:415656..415869 | Clytia hemisphaerica | exon |
| TCONS_00053241-exon-scaffold_227-1510915933:414728..414781 | TCONS_00053241-exon-scaffold_227-1510915933:414728..414781 | Clytia hemisphaerica | exon |
| TCONS_00053241-exon-scaffold_227-1491911889:415656..415869 | TCONS_00053241-exon-scaffold_227-1491911889:415656..415869 | Clytia hemisphaerica | exon |
| TCONS_00053241-exon-scaffold_227-1491911889:414728..414781 | TCONS_00053241-exon-scaffold_227-1491911889:414728..414781 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_227 | supercontig | scaffold_227:414728..415869 - |
Blast
The following BLAST results are available for this feature:
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