TCONS_00053230 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053230
Unique NameTCONS_00053230
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1089

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053230 ID=TCONS_00053230|Name=TCONS_00053230|organism=Clytia hemisphaerica|type=transcript|length=1089bp
agTTATGAAAGCTGTATCGCCATCGACAGCTCAACTGAAACTGAAGGTGA
AGTTGGAGACGAGTTGCAAGCTGGCAAAGTGAACGACGTGAGCTTTTCCA
GTGAGGAGTCCGATGCAGAGTCCGATTTGGGTGGAGATTATCTCAATGGC
ACTGGTGGAAACGTTCCTTTGTTTCCTCAAAAGTACGCATCGCCAAAAGA
TGGACTCTCGATCAAACCGGATGGTACTTCAAATTCCAAACAGACACCTG
GTGcttcaaatttaatttctaaGCTGAATTCATCGAATCCTGATGCGAGG
CATCAACAAAAGTCGATTCAACTTTCATCTCCGAACTCATTGAACGAATC
TTCACCGGTTTTACCGAACTATCTTGGTGGAACTCCTAAAGCCGTCAAAA
GATCCGCATCAAGAAGACAAGAAGAAGAGGAGAGCTTGGAACTTATTGAT
GCGGCGAAGATTATGGAACAATTCAAAATGTTGTACGATCGGCAAAACAA
GATCATGACAGAAATTGTGAAATTAAGAGCACACATCGACAACAAGATGG
CATCTCTTCCCATCGAAGACGATCAATTCCAGCTTCCAGAAGTAAACAGC
CAACAAGAAATGGATACCTTGGAAGAAAATCTAAATGATCCTGATTTCTT
AGCAAAGTTTaaatctcGTATCGCACGAATTGGCGGGGTTGAATATGGTG
ATGCTACAATTCTAGTGATGGAAAAattttttacaAGAGCTTTCTTAAGC
ACCTGCAACATGGAAGGAAACAACGGGAAGTTTGCCTTCAAGAAATCCAA
GGCTTATTCTGCAATTAGTGATGTTCTAGTGAAAAAGTATGGCACAACGG
AAGATAATGTTGGGAAGAAAGTTGCCAACAAATTACGAAACGCCCCTGGA
CAGAAAGGTGGACTTGGCAGAAAGAAGTAGaaagtttatttatttatttt
atttttatgtgtaGATTTGAATAGGGTTTTGCTTACTACTTCCCATAATA
AAACATGGACCTGACTggattaatttttatttttgttaagtCACAATATA
ACATTGAATTCAAGGATTCTTAGCCAAAGTAGCACTAGC
Run BLAST on NCBI

protein sequence of TCONS_00053230-protein

>TCONS_00053230-protein ID=TCONS_00053230-protein|Name=TCONS_00053230-protein|organism=Clytia hemisphaerica|type=polypeptide|length=309bp
SYESCIAIDSSTETEGEVGDELQAGKVNDVSFSSEESDAESDLGGDYLNG
TGGNVPLFPQKYASPKDGLSIKPDGTSNSKQTPGASNLISKLNSSNPDAR
HQQKSIQLSSPNSLNESSPVLPNYLGGTPKAVKRSASRRQEEEESLELID
AAKIMEQFKMLYDRQNKIMTEIVKLRAHIDNKMASLPIEDDQFQLPEVNS
QQEMDTLEENLNDPDFLAKFKSRIARIGGVEYGDATILVMEKFFTRAFLS
TCNMEGNNGKFAFKKSKAYSAISDVLVKKYGTTEDNVGKKVANKLRNAPG
QKGGLGRKK
Run BLAST on NCBI

transcript from alignment at scaffold_227:101072..105320-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053230 ID=TCONS_00053230|Name=TCONS_00053230|organism=Clytia hemisphaerica|type=transcript|length=4249bp|location=Sequence derived from alignment at scaffold_227:101072..105320- (Clytia hemisphaerica)
AGTTATGAAAGCTGTATCGCCATCGACAGCTCAACTGAAACTGAAGGTGA
AGTTGGAGACGAGTTGCAAGCTGGCAAAGTGAACGACGTGAGCTTTTCCA
GTGAGGAGTCCGATGCAGAGTCCGATTTGGGTGGAGATTATCTCAATGGC
ACTGGTGGAAACGTTCCTTTGTTTCCTCAAAAGTACGCATCGCCAAAAGA
TGGACTCTCGATCAAACCGTATGTATTAATATCATATGTTTAAGTGTTAC
AATTGGAGAGTTATAATCATCGAAGAGCACTTCATTTTAATCCTTCTTGA
ATGAAATTTGAATTTGGTCTGTTTCTTTTTTTACATTAAAATCCAAACTT
CGAATCTTCAAATATTATTTTAATATAAAATTCATTCTTCTAAGTATAAA
TTTGACCAGGGATATTTCAATATTGCATTATTTTTCATACAGGGATGGTA
CTTCAAATTCCAAACAGACACCTGGTGCTTCAAATTTAATTTCTAAGCTG
AATTCATCGAATCCTGATGCGAGGTGAATAATATTATAATAATTGAGTCC
AAATTTAATTCATAATACCTTATTACACAAATATTACTAGTCATTTTATT
AACGCGAACTGAAAAATTTCGTGTTAATTTTTTGCGTGTTAATTTCAAGG
CCGTTGAATAGTTGCCTAGTAATATTCGTGTAATAAGGTAGTAATAGTAG
AAATAAAATTATGAAAATATTTTAAAAGTATATAGATTTCAGTACAATTC
TAACAATTGTATTATTGGTGTTCTTGGTAATTAGATATTGGTATCAAGGC
TGTACACATCCCCTAAAAAGATTTTAGATATAATTTTTTGGCCTATATCG
TAGGCTTTAGTAGATTTATAAAATAATTTTGTTAAATTTACGTTTGTTTT
AGGCATCAACAAAAGTCGATTCAACTTTCATCTCCGAACTCATTGAACGA
ATCTTCACCGGTTTTGTAAGTTGACTAAACTATTTCGTCGTAATGTCAGG
GCTCTGTCCATACACACTTTTTTAATAAGAATAGTGTACTTTGGCTGATG
TTGTGCATTAATCTTCTTTTTCTATTGTTCTAAACAGTAGTACTTTTCCT
ACATTTTTTACCCACTATAGTCGGAGCCCTTAATACTTTTGAATTTTGAA
CTCATTTAATTTGGACTGCAGTTGTGATTTAGTGATGATAAAAAAGTGAT
ACCCTTTGATACCATTTGATACCCATTTTGACGTTTATGATGACTTCGAA
CCTCCATATATCGATAAGATATCAGGAATAAAAAAGTGATGGTTTAATAT
TTAAGACAGAGTACACCCTTTTTAAGATGAAAAAACAAATTATACCGTGT
GTATTTTTGGATACAAATCTTTATACTTATACTAAATCTTTTCAGACCGA
ACTATCTTGGTGGAACTCCTAAAGCCGTCAAAAGATCCGCATCAAGGTAA
TTTCTGAATAAATAGTCATTGAGGTACTCCAAAAGCATAGGGAATTTATG
ATTCACATTTTGTCTTTTTTAACAGAAGCAATGTTTTAGCACTTAAAGGT
CATAACTTTTGATGTAGTTAACCAAATTTGATAAATTACCCCTCAAAATA
TATTCCAATAGATCAATTTATTATTTGGTTCTTCAGGGTATTCCTTCAAT
AGTATTCGTTTTATTTATTAGAAGACAAGAAGAAGAGGAGAGCTTGGAAC
TTATTGATGCGGCGAAGATTATGGGTCAGTTTATGTTAGTTTTGTGTACT
CCTAGCGAAGTCCTGATATACAGTTTTCTTTGTAAAGCTAATGTGATATT
ATAGGAGTCAGAAATTTTGATTTTAGTAATAAACTAAATTTTAAGACATC
TCTGTCAGGAAATTAAGCATTAAANGATTTTAGTTATAAACTAAATTTTA
AGACATCTCTGTCAGGAAATTAAGCATTAAAAACGTTTGTCAGGGACCGA
TGGTTTAGTCTTGAAAATGCTCTTTCTGTAAACAGTTTTTATGAAATGTG
TTGACTTTTATAAGAACATTCACGAGCCTTAAATTTGGCAAAGAAACTAA
GAACAAGCTCAGCCTCGGAATTTTCTGAGAACTTTTAAAAGCAACCTTTT
TTTGGCACTGTTAATACAGAAAGGGATGTTTTCCAGAATATTTTACTCTT
TTTCAGCAAAAAGCTTGTTTAGAAGATTTTCAAGGTTTTTTTGAAGATAG
AAGTTTTGCTTTGGAAATAATGAAGGTTGCAAAGTACTGTCAAAAAGAAC
ATTAAGAACAGCTGAATAACATGAAGCCTTAAAATTCCCAAAACTTAAGA
ACAATTGAGCCTTAGTCAAAATTTACTGGTTCTTTTAAAAAGTGATTGTA
GTTCATCAGTTAAGGCCTTTGAATTTTGTCAATGCATTGCTTAAAAAGCT
AACTTCTGTCTTTTCTATCTTCAGAACAATTCAAAATGTTGTACGATCGG
CAAAACAAGATCATGACAGAAATTGTGAAATTAAGAGCACACATCGACAA
CAAGATGGCATCTCTTCCCATCGAAGACGATCAATTCCAGCTTCCAGAAG
TAAACAGCCAACAAGAAATGGATACCTTGGAAGAAAATCTAAATGATCCT
GATTTCTTAGCAAAGTTTGTAAGTATGATTAATTCAGTTAATTTCAATTT
AGCTGTCAGAAAAAACGAAATTCAAATCCCCAGCCATAAAAGATATGGGA
ATATCGATCCCCATTGAGTTTTGGTCCGTTACTTTTACCTCCACTAGCTA
ATAAAATCCCACCGGGTCTGTGAGAAGGGGGTATCTGATTAACACCAAAA
AACAGCGAACAACAAACATCCTGTTTCATCATAGTAAATTATGTGAAGAC
TTTGTGTCATATCTTTGCACTGAGTAGATGCTTTTGAACGTTTTTTCACA
GTGATTATGCTCTGAAATTGAAGAATTACCTCTTTGAAAATGGTGATAAT
ATCTCAGTAAATTTTTCTTTTTTCTTATCTATATCTTCATTTTGAAAGAT
TTTTTCAACTTTCTTTTTGATAATATCCACTTCCGGGTTAACTTTTCGAC
CGGCACCTGCATCTCTATCAAATTGAAGGTGAAATTAAATTCGATCTCTT
TTTATAGAAATCTCGTATCGCACGAATTGGCGGGGTTGAATATGGTGATG
CTACAATTCTAGTGATGGAAAAGTAAGTAGTGATAAAAGAGATCCTTCGG
TCTTCTAGATATTTAAATGTCTAATAACAAAGATCTTTCAATACTGAAAA
CGATAGTGCTTCAAATCTTGAGATGGTGATTTTCAGTTCATAGTTCTGAA
AGTTTTCTGACTACTGGTTTTGTACGTCCGATGTTTATTATGCATGGTTC
TTCAACGAGGCAAAGGAAAACAATGCTCTATTTAATTGCAACATTTTTTA
AATAAAAAGACTTTTCCTTTTTGTTTTTTTCCATCGTGCATTTCGAACTT
TAAATTAAAGTTAACTAAACAAAGACCAAGTTTTTTCCCAAATGGGGTAG
ATCCTAGTGGGTCACTGAGGCAGGGGTGTTGTGTTATATCGTTCTCTTTA
AAAAATCACAATTCAAAATACATAGATCATTTTCAAAACTTTTTTTCTTT
AGATTTTTTACAAGAGCTTTCTTAAGCACCTGCAACATGGAAGGAAACAA
CGGGAAGTTTGCCTTCAAGAAATCCAAGGCTTATTCTGCAATTAGTGGTA
ATTTGTTTCTACTTTTTAAAATTTAGTGACTGGTTGATTCTAATGAATAA
TCAAATAAAAAAGAAGGCTGTTTCTTACAATCAATCAAGCCCAATCTAGT
GTACCAAATATCTATCCTACGAAGAAGATTTTAATGATCTCAATAGGTTT
CTCAGATTAAGAAAGTAAGGTGACTGATATCTATTCTTGTTTTATTTTTC
CCTGTGTTAATGTTTTTGTCGGTTTTGCCAACAAATCTCTCTCTCTAAAG
ATTTTACTATTATTTTATTTCTTTCAATAGATGTTCTAGTGAAAAAGTAT
GGCACAACGGAAGATAATGTTGGGAAGAAAGTTGCCAACAAATTACGAAA
CGCCCCTGGACAGAAAGGTGGACTTGGCAGAAAGAAGTAGAAAGTTTATT
TATTTATTTTATTTTTATGTGTAGATTTGAATAGGGTTTTGCTTACTACT
TCCCATAATAAAACATGGACCTGACTGGATTAATTTTTATTTTTGTTAAG
TCACAATATAACATTGAATTCAAGGATTCTTAGCCAAAGTAGCACTAGC

Coding sequence (CDS) from alignment at scaffold_227:101072..105320-

>TCONS_00053230 ID=TCONS_00053230|Name=TCONS_00053230|organism=Clytia hemisphaerica|type=CDS|length=8370bp|location=Sequence derived from alignment at scaffold_227:101072..105320- (Clytia hemisphaerica)
ATGTTCTAGTGAAAAAGTATGGCACAACGGAAGATAATGTTGGGAAGAAA
GTTGCCAACAAATTACGAAACGCCCCTGGACAGAAAGGTGGACTTGGCAG
AAAGAAGTAGATTTTTTACAAGAGCTTTCTTAAGCACCTGCAACATGGAA
GGAAACAACGGGAAGTTTGCCTTCAAGAAATCCAAGGCTTATTCTGCAAT
TAGTGAAATCTCGTATCGCACGAATTGGCGGGGTTGAATATGGTGATGCT
ACAATTCTAGTGATGGAAAAAACAATTCAAAATGTTGTACGATCGGCAAA
ACAAGATCATGACAGAAATTGTGAAATTAAGAGCACACATCGACAACAAG
ATGGCATCTCTTCCCATCGAAGACGATCAATTCCAGCTTCCAGAAGTAAA
CAGCCAACAAGAAATGGATACCTTGGAAGAAAATCTAAATGATCCTGATT
TCTTAGCAAAGTTTAAGACAAGAAGAAGAGGAGAGCTTGGAACTTATTGA
TGCGGCGAAGATTATGGACCGAACTATCTTGGTGGAACTCCTAAAGCCGT
CAAAAGATCCGCATCAAGGCATCAACAAAAGTCGATTCAACTTTCATCTC
CGAACTCATTGAACGAATCTTCACCGGTTTTGGATGGTACTTCAAATTCC
AAACAGACACCTGGTGCTTCAAATTTAATTTCTAAGCTGAATTCATCGAA
TCCTGATGCGAGAGTTATGAAAGCTGTATCGCCATCGACAGCTCAACTGA
AACTGAAGGTGAAGTTGGAGACGAGTTGCAAGCTGGCAAAGTGAACGACG
TGAGCTTTTCCAGTGAGGAGTCCGATGCAGAGTCCGATTTGGGTGGAGAT
TATCTCAATGGCACTGGTGGAAACGTTCCTTTGTTTCCTCAAAAGTACGC
ATCGCCAAAAGATGGACTCTCGATCAAACCATGTTCTAGTGAAAAAGTAT
GGCACAACGGAAGATAATGTTGGGAAGAAAGTTGCCAACAAATTACGAAA
CGCCCCTGGACAGAAAGGTGGACTTGGCAGAAAGAAGTAGATTTTTTACA
AGAGCTTTCTTAAGCACCTGCAACATGGAAGGAAACAACGGGAAGTTTGC
CTTCAAGAAATCCAAGGCTTATTCTGCAATTAGTGAAATCTCGTATCGCA
CGAATTGGCGGGGTTGAATATGGTGATGCTACAATTCTAGTGATGGAAAA
AACAATTCAAAATGTTGTACGATCGGCAAAACAAGATCATGACAGAAATT
GTGAAATTAAGAGCACACATCGACAACAAGATGGCATCTCTTCCCATCGA
AGACGATCAATTCCAGCTTCCAGAAGTAAACAGCCAACAAGAAATGGATA
CCTTGGAAGAAAATCTAAATGATCCTGATTTCTTAGCAAAGTTTAAGACA
AGAAGAAGAGGAGAGCTTGGAACTTATTGATGCGGCGAAGATTATGGACC
GAACTATCTTGGTGGAACTCCTAAAGCCGTCAAAAGATCCGCATCAAGGC
ATCAACAAAAGTCGATTCAACTTTCATCTCCGAACTCATTGAACGAATCT
TCACCGGTTTTGGATGGTACTTCAAATTCCAAACAGACACCTGGTGCTTC
AAATTTAATTTCTAAGCTGAATTCATCGAATCCTGATGCGAGAGTTATGA
AAGCTGTATCGCCATCGACAGCTCAACTGAAACTGAAGGTGAAGTTGGAG
ACGAGTTGCAAGCTGGCAAAGTGAACGACGTGAGCTTTTCCAGTGAGGAG
TCCGATGCAGAGTCCGATTTGGGTGGAGATTATCTCAATGGCACTGGTGG
AAACGTTCCTTTGTTTCCTCAAAAGTACGCATCGCCAAAAGATGGACTCT
CGATCAAACCATGTTCTAGTGAAAAAGTATGGCACAACGGAAGATAATGT
TGGGAAGAAAGTTGCCAACAAATTACGAAACGCCCCTGGACAGAAAGGTG
GACTTGGCAGAAAGAAGTAGATTTTTTACAAGAGCTTTCTTAAGCACCTG
CAACATGGAAGGAAACAACGGGAAGTTTGCCTTCAAGAAATCCAAGGCTT
ATTCTGCAATTAGTGAAATCTCGTATCGCACGAATTGGCGGGGTTGAATA
TGGTGATGCTACAATTCTAGTGATGGAAAAAACAATTCAAAATGTTGTAC
GATCGGCAAAACAAGATCATGACAGAAATTGTGAAATTAAGAGCACACAT
CGACAACAAGATGGCATCTCTTCCCATCGAAGACGATCAATTCCAGCTTC
CAGAAGTAAACAGCCAACAAGAAATGGATACCTTGGAAGAAAATCTAAAT
GATCCTGATTTCTTAGCAAAGTTTAAGACAAGAAGAAGAGGAGAGCTTGG
AACTTATTGATGCGGCGAAGATTATGGACCGAACTATCTTGGTGGAACTC
CTAAAGCCGTCAAAAGATCCGCATCAAGGCATCAACAAAAGTCGATTCAA
CTTTCATCTCCGAACTCATTGAACGAATCTTCACCGGTTTTGGATGGTAC
TTCAAATTCCAAACAGACACCTGGTGCTTCAAATTTAATTTCTAAGCTGA
ATTCATCGAATCCTGATGCGAGAGTTATGAAAGCTGTATCGCCATCGACA
GCTCAACTGAAACTGAAGGTGAAGTTGGAGACGAGTTGCAAGCTGGCAAA
GTGAACGACGTGAGCTTTTCCAGTGAGGAGTCCGATGCAGAGTCCGATTT
GGGTGGAGATTATCTCAATGGCACTGGTGGAAACGTTCCTTTGTTTCCTC
AAAAGTACGCATCGCCAAAAGATGGACTCTCGATCAAACCATGTTCTAGT
GAAAAAGTATGGCACAACGGAAGATAATGTTGGGAAGAAAGTTGCCAACA
AATTACGAAACGCCCCTGGACAGAAAGGTGGACTTGGCAGAAAGAAGTAG
ATTTTTTACAAGAGCTTTCTTAAGCACCTGCAACATGGAAGGAAACAACG
GGAAGTTTGCCTTCAAGAAATCCAAGGCTTATTCTGCAATTAGTGAAATC
TCGTATCGCACGAATTGGCGGGGTTGAATATGGTGATGCTACAATTCTAG
TGATGGAAAAAACAATTCAAAATGTTGTACGATCGGCAAAACAAGATCAT
GACAGAAATTGTGAAATTAAGAGCACACATCGACAACAAGATGGCATCTC
TTCCCATCGAAGACGATCAATTCCAGCTTCCAGAAGTAAACAGCCAACAA
GAAATGGATACCTTGGAAGAAAATCTAAATGATCCTGATTTCTTAGCAAA
GTTTAAGACAAGAAGAAGAGGAGAGCTTGGAACTTATTGATGCGGCGAAG
ATTATGGACCGAACTATCTTGGTGGAACTCCTAAAGCCGTCAAAAGATCC
GCATCAAGGCATCAACAAAAGTCGATTCAACTTTCATCTCCGAACTCATT
GAACGAATCTTCACCGGTTTTGGATGGTACTTCAAATTCCAAACAGACAC
CTGGTGCTTCAAATTTAATTTCTAAGCTGAATTCATCGAATCCTGATGCG
AGAGTTATGAAAGCTGTATCGCCATCGACAGCTCAACTGAAACTGAAGGT
GAAGTTGGAGACGAGTTGCAAGCTGGCAAAGTGAACGACGTGAGCTTTTC
CAGTGAGGAGTCCGATGCAGAGTCCGATTTGGGTGGAGATTATCTCAATG
GCACTGGTGGAAACGTTCCTTTGTTTCCTCAAAAGTACGCATCGCCAAAA
GATGGACTCTCGATCAAACCATGTTCTAGTGAAAAAGTATGGCACAACGG
AAGATAATGTTGGGAAGAAAGTTGCCAACAAATTACGAAACGCCCCTGGA
CAGAAAGGTGGACTTGGCAGAAAGAAGTAGATTTTTTACAAGAGCTTTCT
TAAGCACCTGCAACATGGAAGGAAACAACGGGAAGTTTGCCTTCAAGAAA
TCCAAGGCTTATTCTGCAATTAGTGAAATCTCGTATCGCACGAATTGGCG
GGGTTGAATATGGTGATGCTACAATTCTAGTGATGGAAAAAACAATTCAA
AATGTTGTACGATCGGCAAAACAAGATCATGACAGAAATTGTGAAATTAA
GAGCACACATCGACAACAAGATGGCATCTCTTCCCATCGAAGACGATCAA
TTCCAGCTTCCAGAAGTAAACAGCCAACAAGAAATGGATACCTTGGAAGA
AAATCTAAATGATCCTGATTTCTTAGCAAAGTTTAAGACAAGAAGAAGAG
GAGAGCTTGGAACTTATTGATGCGGCGAAGATTATGGACCGAACTATCTT
GGTGGAACTCCTAAAGCCGTCAAAAGATCCGCATCAAGGCATCAACAAAA
GTCGATTCAACTTTCATCTCCGAACTCATTGAACGAATCTTCACCGGTTT
TGGATGGTACTTCAAATTCCAAACAGACACCTGGTGCTTCAAATTTAATT
TCTAAGCTGAATTCATCGAATCCTGATGCGAGAGTTATGAAAGCTGTATC
GCCATCGACAGCTCAACTGAAACTGAAGGTGAAGTTGGAGACGAGTTGCA
AGCTGGCAAAGTGAACGACGTGAGCTTTTCCAGTGAGGAGTCCGATGCAG
AGTCCGATTTGGGTGGAGATTATCTCAATGGCACTGGTGGAAACGTTCCT
TTGTTTCCTCAAAAGTACGCATCGCCAAAAGATGGACTCTCGATCAAACC
ATGTTCTAGTGAAAAAGTATGGCACAACGGAAGATAATGTTGGGAAGAAA
GTTGCCAACAAATTACGAAACGCCCCTGGACAGAAAGGTGGACTTGGCAG
AAAGAAGTAGATTTTTTACAAGAGCTTTCTTAAGCACCTGCAACATGGAA
GGAAACAACGGGAAGTTTGCCTTCAAGAAATCCAAGGCTTATTCTGCAAT
TAGTGAAATCTCGTATCGCACGAATTGGCGGGGTTGAATATGGTGATGCT
ACAATTCTAGTGATGGAAAAAACAATTCAAAATGTTGTACGATCGGCAAA
ACAAGATCATGACAGAAATTGTGAAATTAAGAGCACACATCGACAACAAG
ATGGCATCTCTTCCCATCGAAGACGATCAATTCCAGCTTCCAGAAGTAAA
CAGCCAACAAGAAATGGATACCTTGGAAGAAAATCTAAATGATCCTGATT
TCTTAGCAAAGTTTAAGACAAGAAGAAGAGGAGAGCTTGGAACTTATTGA
TGCGGCGAAGATTATGGACCGAACTATCTTGGTGGAACTCCTAAAGCCGT
CAAAAGATCCGCATCAAGGCATCAACAAAAGTCGATTCAACTTTCATCTC
CGAACTCATTGAACGAATCTTCACCGGTTTTGGATGGTACTTCAAATTCC
AAACAGACACCTGGTGCTTCAAATTTAATTTCTAAGCTGAATTCATCGAA
TCCTGATGCGAGAGTTATGAAAGCTGTATCGCCATCGACAGCTCAACTGA
AACTGAAGGTGAAGTTGGAGACGAGTTGCAAGCTGGCAAAGTGAACGACG
TGAGCTTTTCCAGTGAGGAGTCCGATGCAGAGTCCGATTTGGGTGGAGAT
TATCTCAATGGCACTGGTGGAAACGTTCCTTTGTTTCCTCAAAAGTACGC
ATCGCCAAAAGATGGACTCTCGATCAAACCATGTTCTAGTGAAAAAGTAT
GGCACAACGGAAGATAATGTTGGGAAGAAAGTTGCCAACAAATTACGAAA
CGCCCCTGGACAGAAAGGTGGACTTGGCAGAAAGAAGTAGATTTTTTACA
AGAGCTTTCTTAAGCACCTGCAACATGGAAGGAAACAACGGGAAGTTTGC
CTTCAAGAAATCCAAGGCTTATTCTGCAATTAGTGAAATCTCGTATCGCA
CGAATTGGCGGGGTTGAATATGGTGATGCTACAATTCTAGTGATGGAAAA
AACAATTCAAAATGTTGTACGATCGGCAAAACAAGATCATGACAGAAATT
GTGAAATTAAGAGCACACATCGACAACAAGATGGCATCTCTTCCCATCGA
AGACGATCAATTCCAGCTTCCAGAAGTAAACAGCCAACAAGAAATGGATA
CCTTGGAAGAAAATCTAAATGATCCTGATTTCTTAGCAAAGTTTAAGACA
AGAAGAAGAGGAGAGCTTGGAACTTATTGATGCGGCGAAGATTATGGACC
GAACTATCTTGGTGGAACTCCTAAAGCCGTCAAAAGATCCGCATCAAGGC
ATCAACAAAAGTCGATTCAACTTTCATCTCCGAACTCATTGAACGAATCT
TCACCGGTTTTGGATGGTACTTCAAATTCCAAACAGACACCTGGTGCTTC
AAATTTAATTTCTAAGCTGAATTCATCGAATCCTGATGCGAGAGTTATGA
AAGCTGTATCGCCATCGACAGCTCAACTGAAACTGAAGGTGAAGTTGGAG
ACGAGTTGCAAGCTGGCAAAGTGAACGACGTGAGCTTTTCCAGTGAGGAG
TCCGATGCAGAGTCCGATTTGGGTGGAGATTATCTCAATGGCACTGGTGG
AAACGTTCCTTTGTTTCCTCAAAAGTACGCATCGCCAAAAGATGGACTCT
CGATCAAACCATGTTCTAGTGAAAAAGTATGGCACAACGGAAGATAATGT
TGGGAAGAAAGTTGCCAACAAATTACGAAACGCCCCTGGACAGAAAGGTG
GACTTGGCAGAAAGAAGTAGATTTTTTACAAGAGCTTTCTTAAGCACCTG
CAACATGGAAGGAAACAACGGGAAGTTTGCCTTCAAGAAATCCAAGGCTT
ATTCTGCAATTAGTGAAATCTCGTATCGCACGAATTGGCGGGGTTGAATA
TGGTGATGCTACAATTCTAGTGATGGAAAAAACAATTCAAAATGTTGTAC
GATCGGCAAAACAAGATCATGACAGAAATTGTGAAATTAAGAGCACACAT
CGACAACAAGATGGCATCTCTTCCCATCGAAGACGATCAATTCCAGCTTC
CAGAAGTAAACAGCCAACAAGAAATGGATACCTTGGAAGAAAATCTAAAT
GATCCTGATTTCTTAGCAAAGTTTAAGACAAGAAGAAGAGGAGAGCTTGG
AACTTATTGATGCGGCGAAGATTATGGACCGAACTATCTTGGTGGAACTC
CTAAAGCCGTCAAAAGATCCGCATCAAGGCATCAACAAAAGTCGATTCAA
CTTTCATCTCCGAACTCATTGAACGAATCTTCACCGGTTTTGGATGGTAC
TTCAAATTCCAAACAGACACCTGGTGCTTCAAATTTAATTTCTAAGCTGA
ATTCATCGAATCCTGATGCGAGAGTTATGAAAGCTGTATCGCCATCGACA
GCTCAACTGAAACTGAAGGTGAAGTTGGAGACGAGTTGCAAGCTGGCAAA
GTGAACGACGTGAGCTTTTCCAGTGAGGAGTCCGATGCAGAGTCCGATTT
GGGTGGAGATTATCTCAATGGCACTGGTGGAAACGTTCCTTTGTTTCCTC
AAAAGTACGCATCGCCAAAAGATGGACTCTCGATCAAACCATGTTCTAGT
GAAAAAGTATGGCACAACGGAAGATAATGTTGGGAAGAAAGTTGCCAACA
AATTACGAAACGCCCCTGGACAGAAAGGTGGACTTGGCAGAAAGAAGTAG
ATTTTTTACAAGAGCTTTCTTAAGCACCTGCAACATGGAAGGAAACAACG
GGAAGTTTGCCTTCAAGAAATCCAAGGCTTATTCTGCAATTAGTGAAATC
TCGTATCGCACGAATTGGCGGGGTTGAATATGGTGATGCTACAATTCTAG
TGATGGAAAAAACAATTCAAAATGTTGTACGATCGGCAAAACAAGATCAT
GACAGAAATTGTGAAATTAAGAGCACACATCGACAACAAGATGGCATCTC
TTCCCATCGAAGACGATCAATTCCAGCTTCCAGAAGTAAACAGCCAACAA
GAAATGGATACCTTGGAAGAAAATCTAAATGATCCTGATTTCTTAGCAAA
GTTTAAGACAAGAAGAAGAGGAGAGCTTGGAACTTATTGATGCGGCGAAG
ATTATGGACCGAACTATCTTGGTGGAACTCCTAAAGCCGTCAAAAGATCC
GCATCAAGGCATCAACAAAAGTCGATTCAACTTTCATCTCCGAACTCATT
GAACGAATCTTCACCGGTTTTGGATGGTACTTCAAATTCCAAACAGACAC
CTGGTGCTTCAAATTTAATTTCTAAGCTGAATTCATCGAATCCTGATGCG
AGAGTTATGAAAGCTGTATCGCCATCGACAGCTCAACTGAAACTGAAGGT
GAAGTTGGAGACGAGTTGCAAGCTGGCAAAGTGAACGACGTGAGCTTTTC
CAGTGAGGAGTCCGATGCAGAGTCCGATTTGGGTGGAGATTATCTCAATG
GCACTGGTGGAAACGTTCCTTTGTTTCCTCAAAAGTACGCATCGCCAAAA
GATGGACTCTCGATCAAACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033599XLOC_033599Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053230-proteinTCONS_00053230-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053230-exon-scaffold_227-1575043694:105103..105320TCONS_00053230-exon-scaffold_227-1575043694:105103..105320Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1575043694:104798..104878TCONS_00053230-exon-scaffold_227-1575043694:104798..104878Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1575043694:104356..104418TCONS_00053230-exon-scaffold_227-1575043694:104356..104418Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1575043694:103875..103925TCONS_00053230-exon-scaffold_227-1575043694:103875..103925Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1575043694:103597..103649TCONS_00053230-exon-scaffold_227-1575043694:103597..103649Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1575043694:102703..102896TCONS_00053230-exon-scaffold_227-1575043694:102703..102896Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1575043694:102149..102213TCONS_00053230-exon-scaffold_227-1575043694:102149..102213Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1575043694:101624..101718TCONS_00053230-exon-scaffold_227-1575043694:101624..101718Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1575043694:101072..101340TCONS_00053230-exon-scaffold_227-1575043694:101072..101340Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1510915933:105103..105320TCONS_00053230-exon-scaffold_227-1510915933:105103..105320Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1510915933:104798..104878TCONS_00053230-exon-scaffold_227-1510915933:104798..104878Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1510915933:104356..104418TCONS_00053230-exon-scaffold_227-1510915933:104356..104418Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1510915933:103875..103925TCONS_00053230-exon-scaffold_227-1510915933:103875..103925Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1510915933:103597..103649TCONS_00053230-exon-scaffold_227-1510915933:103597..103649Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1510915933:102703..102896TCONS_00053230-exon-scaffold_227-1510915933:102703..102896Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1510915933:102149..102213TCONS_00053230-exon-scaffold_227-1510915933:102149..102213Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1510915933:101624..101718TCONS_00053230-exon-scaffold_227-1510915933:101624..101718Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1510915933:101072..101340TCONS_00053230-exon-scaffold_227-1510915933:101072..101340Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1491911889:105103..105320TCONS_00053230-exon-scaffold_227-1491911889:105103..105320Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1491911889:104798..104878TCONS_00053230-exon-scaffold_227-1491911889:104798..104878Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1491911889:104356..104418TCONS_00053230-exon-scaffold_227-1491911889:104356..104418Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1491911889:103875..103925TCONS_00053230-exon-scaffold_227-1491911889:103875..103925Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1491911889:103597..103649TCONS_00053230-exon-scaffold_227-1491911889:103597..103649Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1491911889:102703..102896TCONS_00053230-exon-scaffold_227-1491911889:102703..102896Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1491911889:102149..102213TCONS_00053230-exon-scaffold_227-1491911889:102149..102213Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1491911889:101624..101718TCONS_00053230-exon-scaffold_227-1491911889:101624..101718Clytia hemisphaericaexon
TCONS_00053230-exon-scaffold_227-1491911889:101072..101340TCONS_00053230-exon-scaffold_227-1491911889:101072..101340Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_227supercontigscaffold_227:101072..105320 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.201578	0	0	0.0671791	3.946e-06	1.16328	0.541614	0	0	2.71725e-09	0	0	0	0	0	0	0	0.131876	0	0.0674608	0.194897	0.171115	0	0.168101	0	0	0.276404	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR032071DUF4806
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053230 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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