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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053212 ID=TCONS_00053212|Name=TCONS_00053212|organism=Clytia hemisphaerica|type=transcript|length=1219bp
tattttggcgggacctaattttggcgagcggcgaaaatcttaaaaaaatt
taattttggtgggaactaattttggcgagtcaacgaaatttttgattttg
gcgggaactaattttggcgaatgacagcgtaaatatggtctattttgcct
tattttgagcaattttgatgaatttcaggaattatttaggcaaggaaaca
aaaaatttaattttggcgggaactaattttggcgaatttcgtctaaattc
gccaaatccgccaaaattagttccaaatCTGTGTTCCCTGTGCggattcg
agttatggagactccactgtattttgaaattgatttatAACAATTTTTCC
ACTATTAACCATAGGCCTTTGGTATCATCTCATCAATTCTGTTCTTGATC
GATGGAGCACTCCACATTGTACAACGTAAGAGATTGTTCCCAGCATCTAT
GTCAGTAGAAGAACCAGCATCCATGACAGAAGAGGTAGTACTAGAAATAA
CAACACAGTCTAAGTCATCAACGGAAAAAGCTACGGAGTCCACAACAGAA
GAGGCTACGGATTCGACAAAAGAGGCTACGGATTCGACAAAAGAGGTCAC
GGATTCAACTAAAGAGGCTACGGAGTCGAAAAAAGAGGCTACAGAGTCAA
CAACAGAGGCTTCTGAGCCAACAACAGAGGCTTCTGAGCCAACAATAGAG
GCTTCTGAGCCAACAACAGAGGCTTCTGAGCCAACAACAGAGGCTTCTGA
GCCAACAGTAGAGGCTTCTGAGCCAACAACAGAGGCTTCTGAGCCAACAA
TAGGTTGATTGAAGGGAGATGAAACAGGATTAAACTTAAGCAATGAACGA
GAAAGCCAATCCCTTCCAAAAGCTTGTAGGGCCTTTTAGATCGTCAGCTT
AGGGGGGCTTAGGGCCTTACGTCAGAATTAGTTCTATGCCATGCCATTAC
TGTTGGAATccagattttgaaagaaatgccACCATAGTTTTTCATTTAGC
GAAAAAAAAGAAGCTAATCCTCCAGAATCCTCTAATTGTATTATTAAATA
ATTTCCAGAAATGATTTGAGAATGGGATCGGGATGTTCATGGGGTATATC
ATTTTAGTGTATTTATTGATATCATATTTGTCCATTGTTATTTTTAGAGt
ttattcattgaaatatttatgACAAATTATCAAATAATCAATGTGTcaat
aaatcaaatataaaaaatc Run BLAST on NCBI transcript from alignment at scaffold_227:281883..283101+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053212 ID=TCONS_00053212|Name=TCONS_00053212|organism=Clytia hemisphaerica|type=transcript|length=1219bp|location=Sequence derived from alignment at scaffold_227:281883..283101+ (Clytia hemisphaerica)
tattttggcgggacctaattttggcgagcggcgaaaatcttaaaaaaatt
taattttggtgggaactaattttggcgagtcaacgaaatttttgattttg
gcgggaactaattttggcgaatgacagcgtaaatatggtctattttgcct
tattttgagcaattttgatgaatttcaggaattatttaggcaaggaaaca
aaaaatttaattttggcgggaactaattttggcgaatttcgtctaaattc
gccaaatccgccaaaattagttccaaatCTGTGTTCCCTGTGCggattcg
agttatggagactccactgtattttgaaattgatttatAACAATTTTTCC
ACTATTAACCATAGGCCTTTGGTATCATCTCATCAATTCTGTTCTTGATC
GATGGAGCACTCCACATTGTACAACGTAAGAGATTGTTCCCAGCATCTAT
GTCAGTAGAAGAACCAGCATCCATGACAGAAGAGGTAGTACTAGAAATAA
CAACACAGTCTAAGTCATCAACGGAAAAAGCTACGGAGTCCACAACAGAA
GAGGCTACGGATTCGACAAAAGAGGCTACGGATTCGACAAAAGAGGTCAC
GGATTCAACTAAAGAGGCTACGGAGTCGAAAAAAGAGGCTACAGAGTCAA
CAACAGAGGCTTCTGAGCCAACAACAGAGGCTTCTGAGCCAACAATAGAG
GCTTCTGAGCCAACAACAGAGGCTTCTGAGCCAACAACAGAGGCTTCTGA
GCCAACAGTAGAGGCTTCTGAGCCAACAACAGAGGCTTCTGAGCCAACAA
TAGGTTGATTGAAGGGAGATGAAACAGGATTAAACTTAAGCAATGAACGA
GAAAGCCAATCCCTTCCAAAAGCTTGTAGGGCCTTTTAGATCGTCAGCTT
AGGGGGGCTTAGGGCCTTACGTCAGAATTAGTTCTATGCCATGCCATTAC
TGTTGGAATccagattttgaaagaaatgccACCATAGTTTTTCATTTAGC
GAAAAAAAAGAAGCTAATCCTCCAGAATCCTCTAATTGTATTATTAAATA
ATTTCCAGAAATGATTTGAGAATGGGATCGGGATGTTCATGGGGTATATC
ATTTTAGTGTATTTATTGATATCATATTTGTCCATTGTTATTTTTAGAGt
ttattcattgaaatatttatgACAAATTATCAAATAATCAATGTGTcaat
aaatcaaatataaaaaatc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053212-exon-scaffold_227-1491911889:281883..283101 | TCONS_00053212-exon-scaffold_227-1491911889:281883..283101 | Clytia hemisphaerica | exon |
| TCONS_00053212-exon-scaffold_227-1510915933:281883..283101 | TCONS_00053212-exon-scaffold_227-1510915933:281883..283101 | Clytia hemisphaerica | exon |
| TCONS_00053212-exon-scaffold_227-1575043694:281883..283101 | TCONS_00053212-exon-scaffold_227-1575043694:281883..283101 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_227 | supercontig | scaffold_227:281883..283101 + |
Blast
The following BLAST results are available for this feature:
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