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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053191 ID=TCONS_00053191|Name=TCONS_00053191|organism=Clytia hemisphaerica|type=transcript|length=1173bp
ggaaaagaaaaggtCTCTTGATAAACAtagagtttcatgtatgaaaataa
aggtccgaaccaaacgatttgaatttgaaattttcttcaaccgagggggg
tGTGGatgaaaagtacgtacttaccagggggtatagccattcgTGTACGC
TTGCGTAGAAGGGGGGTATccgatttttgacattttagtgcgtacgtact
atgtggacggcccctagaGTGTAGCTACTAAGGCAGCGAAAACACTGATG
TGGGCCTGGATTCAGAAATGGCTACCTCTGATTTTTGAATGCCCGTCCTA
CATCTACATGGCTAAATTACGCTAGACGAGATGATGTTGAGACGCGATAC
TTTCTCATTCACCATCCTCCTCCAAGAACGATGACAAGATTTTGGTAGCA
GCCAATGGCTCAAACCTGTACCATAATTCACCCTTTCTATTGTAAGGCAA
GCGCCTAACCAACTGAGCTATACCATCTCGATTGCATTCAATTAATCAAA
TTCCAATCGTCAGGTGATCAGAGGTGATTGGAAACTAAAACATCTTGCTA
AGGATTCATGTGGTTGGCTGCTAATATAGGAAGGCTAACTgttgtttttg
ctaaaaagtTTCAGTTGTCAGCGGGGGTAAAAACCAGACATTTTTCAGTG
GGTCATAATCCTCATGCCTTAAGTGGGTCTCATGTTCTTTTGGGTCCCCC
AAAAAAATACGTAAAAAGGCTACCTGTATGTGACTCTAGTTGGATTTTAA
GGGATATTAGTTAGTCTATATTGGACATCAGAAAATAAATAACTACttgc
aaagaaaattttactgccTTACTGCCTTAGTTGACAAAATTACAATGTGG
TTGTTTTACCATTTGAGGTCATTTTTTAGTTATTTGAGGTCATTCTACCA
TTATATGAGCTCGTTATTTCACATTATACGTTTCATCAGTATTACGTTAT
TACGTTCTAGCATTATACGTCTTATCGTTATATGTTTTAACATTATAAGT
TGCCAGTCAAAAATAGtgtaaactttttaaaaagctaaaaatgatgaaaa
aataccctaagggaacttattttggcgagaactgaTTTTGGCGAACGGTc
gattcgaattttttttaaaattttggcaagaactaattttggcgaacgag
gaattttttaattttgacgagaa Run BLAST on NCBI transcript from alignment at scaffold_226:221549..222721 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053191 ID=TCONS_00053191|Name=TCONS_00053191|organism=Clytia hemisphaerica|type=transcript|length=1173bp|location=Sequence derived from alignment at scaffold_226:221549..222721 (Clytia hemisphaerica)
ttctcgtcaaaattaaaaaattcctcgttcgccaaaattagttcttgcca
aaattttaaaaaaaattcgaatcgACCGTTCGCCAAAAtcagttctcgcc
aaaataagttcccttagggtattttttcatcatttttagctttttaaaaa
gtttacaCTATTTTTGACTGGCAACTTATAATGTTAAAACATATAACGAT
AAGACGTATAATGCTAGAACGTAATAACGTAATACTGATGAAACGTATAA
TGTGAAATAACGAGCTCATATAATGGTAGAATGACCTCAAATAACTAAAA
AATGACCTCAAATGGTAAAACAACCACATTGTAATTTTGTCAACTAAGGC
AGTAAggcagtaaaattttctttgcaaGTAGTTATTTATTTTCTGATGTC
CAATATAGACTAACTAATATCCCTTAAAATCCAACTAGAGTCACATACAG
GTAGCCTTTTTACGTATTTTTTTGGGGGACCCAAAAGAACATGAGACCCA
CTTAAGGCATGAGGATTATGACCCACTGAAAAATGTCTGGTTTTTACCCC
CGCTGACAACTGAAactttttagcaaaaacaacAGTTAGCCTTCCTATAT
TAGCAGCCAACCACATGAATCCTTAGCAAGATGTTTTAGTTTCCAATCAC
CTCTGATCACCTGACGATTGGAATTTGATTAATTGAATGCAATCGAGATG
GTATAGCTCAGTTGGTTAGGCGCTTGCCTTACAATAGAAAGGGTGAATTA
TGGTACAGGTTTGAGCCATTGGCTGCTACCAAAATCTTGTCATCGTTCTT
GGAGGAGGATGGTGAATGAGAAAGTATCGCGTCTCAACATCATCTCGTCT
AGCGTAATTTAGCCATGTAGATGTAGGACGGGCATTCAAAAATCAGAGGT
AGCCATTTCTGAATCCAGGCCCACATCAGTGTTTTCGCTGCCTTAGTAGC
TACACtctaggggccgtccacatagtacgtacgcactaaaatgtcaaaaa
tcggATACCCCCCTTCTACGCAAGCGTACAcgaatggctataccccctgg
taagtacgtacttttcatCCACacccccctcggttgaagaaaatttcaaa
ttcaaatcgtttggttcggacctttattttcatacatgaaactctaTGTT
TATCAAGAGaccttttcttttcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053191-exon-scaffold_226-1491911889:221549..222721 | TCONS_00053191-exon-scaffold_226-1491911889:221549..222721 | Clytia hemisphaerica | exon |
| TCONS_00053191-exon-scaffold_226-1510915933:221549..222721 | TCONS_00053191-exon-scaffold_226-1510915933:221549..222721 | Clytia hemisphaerica | exon |
| TCONS_00053191-exon-scaffold_226-1575043694:221549..222721 | TCONS_00053191-exon-scaffold_226-1575043694:221549..222721 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_226 | supercontig | scaffold_226:221549..222721 . |
Blast
The following BLAST results are available for this feature:
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