TCONS_00053154 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053154
Unique NameTCONS_00053154
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3619

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053154 ID=TCONS_00053154|Name=TCONS_00053154|organism=Clytia hemisphaerica|type=transcript|length=3619bp
CTCAGTTCCAAAATGTTTTCTACTTTGAATAAAGGGGTATAGGTTTCCCA
CAGAgggaaaatgtcaaataaatagATTTGGCGGAGAATTTTTCGTTCTC
GAATTGTTCATAAAAGGACAAGCATATATTTAAACttgattgaattcaat
tgaaGTCTTTGCTTTGATTTTATGAATCGGATTAATTAATTGatgttcat
ttttgaaatttgcgaaacaaaaataaattatgaaaaatattttataagat
TGTATGTTTTATGATATTCTTTCCATTCAGATAAGCTTGGAATAtattat
tttgattggttgcAAAGACAAATTCTGTGTGAATATGAAGCAATTGACTG
TATAATCGATCGATTGAAATTCAAGAgttgttgaaaaatatttgtaaata
cGCAAATCAAAGTTGTTCCAAATATGCCATGATTGGTGCTCTTGTTTGTC
CGAAATCAAACTAAAATCACAAAGCAGTAGGCTTTTCGAATCTTTATTTA
TATTGCCGATTTTTATTGAACCAAAATTGATGGACTCATCACTTTTATGA
GAGCGTGTATGTAGGTCATTCCGCTTtctttatttgagaataagtgGCTG
TATGTGGTTTTAATAATGTGGGTCCTTAcactgaaattcattttgctgtT
GTTGATGGAGTTCGGACATTCGTTTGACGGAAACGCCAATTATGAAGGCT
GTTACATTGTGTACAATCAAGGCCGATTTAATGTCTCCTTTCAACTTCCA
ATCAATGAAACAGTTCAAAATGATAACCATACAAGCTTTCAAGAAGACTA
CAAAAACCTCTACGACATCCAACTGCTTTACTCAAACAACTCACACAAAT
ATAATTTCACGCCCGGGCGTTTTTGTCAAGTTACATTCATAACGCCCCAA
AACGGAACGGTTCAATGCCACTTGTTCCCATTGGAAGGGCGTGATATGTA
TCATATTAAATTGGTCGCCCAACGGCTGAGTGATGGGAAGATATTGATTG
ATCAATATATAAAATCTTATTTTAATACGTACCTAGACGGATTCAACTGT
TCAATGGATCATGGGCCAACCTATGTTAAACTTTTGGAGACTTATGATAA
TTTGATCAAATTAGAATGGCAATATCCTTCGTACGAACGTCTATATCTCT
CATCTACGCATAATGTCTCAATACGTGACAAACAAAATGTGACAGTTTTG
GAGAAACCATGTCGATGTAGAAGTTTAGAATGTGAGTGTACCATATCTGG
TGACAACTTGATCGAACCTTGTCAAACATACACTTTATGTCTTCATACGG
TGTTCAAGTTTCATAAAGAGATGGAAAATTGTCAACCTTTTTACGCTAAT
CACACACAAGGCGAAGAAAATTGTCAACAAACGTCTCCAGAAGAAGACCA
ATGGAAGACTCTGTCAATTGTTGGGATTGCCACACCCATTTCTGTTGCAA
TTGCTATTATTGTTCTTGTCAAAATCTATCTACGACGTTGCAAGTCATCA
AGTGTCGAAAGCGAGGACCCCGAGattttcccAGTGGTGCGAGAAGAGGA
AGAAAGCACCTTACGTCCAAGAAATCCGGACGGTTTAGAACCGATCTATG
AAACTATACCAAACATCAGTGTCCGAAACTACGATACTTTAAATGGTGTG
ACGTGAACCCAGAGGCTTGTGGTTACGTGGGATCGTCAGGGAGTTCTCTA
GGCTTCAGAGAATAAATCACAAACAAAGATGGAAAACCTTGTTGATGAAA
ACAAAGATGAAGTAGCAGAAACGCAACGTTTTGGTACCTTAAAACGCATT
GGGATGTTGTCCTTCAGATTGGCTGTTTGTGGACTGTCATTGGTGGACTT
TTGGACAGATTTTCTTCTTGGTTTTGAGTATGCTGGACAAGGGGAAGCAG
TTTATGCGACTTTCACGTTTTGTTCACGTTAATACCAACGGCGTTTGGAG
CTTTATACGTTATACGTTATCTTCGACGAAAAGGTGAACTTACCATTgtt
gacaaaattctttttgtcTGCTGTTTATTCCTTCAAACGCACTTTGTGGT
GCCTATTTGGTTGATCGAGGATACATTCAAAAAACAGCCTAAGATAAATA
AAAGTGaacgaaagaagaaagaaagagTTGAAAACGTCTTAACGATGTTT
GATGCATTCGAAGCGTTACCTCAATTATCCTTCCAGCTTGCGGTTTTGCT
TGGAGATCAAGCGGGTATTGCACATTTCTGCAGCTTTTTACAGTTCTCTC
ATCACTCTTCACTGGTGCTTGGAAACTAACCAAACTTATTGGTATCGAGA
AGACagctttgaaagtttttatgGTTGTTATCAATTTTTCATGGCTGTTG
CCTGAATCTGTTAGTCTTGGATTACTTGCTAATAAAGCAAAGATTGTATC
TTACATCGCTACACCAATCAAATTCCTAATCATCGCTATCCTTAATCTGA
TATATGTCGGAAAATCGAATGctgtaaagaaaaaatgttCCGATTGGTTG
AAGAGTCTCATTTTTAGTTCATTTGTGCCTTTCTATATGTTTTCAAGGAT
AGGTGCTTATTTGGTGATCTTCTTGCTGTTCGCTCAAGTTTTACTTATGA
CGCTTTATACAGTAGGGCCATATAAcaatggtgttttttttaaacgTAAT
GGTAATACAACTTGGGTTATCTTTGCTATAGGATTTGAGGTGGATCTAGC
AGTTGTGTACAATAATGGAGGAAATGTAACTGTGTACGCACTCACCCTAT
TTGCAATTATTTCTAGCTTGGTGCTTTTATCtaaaagttgttgttgttgt
agtcTTACACCTTTTCTTGATATCGAAGTTGAGAGGGACACGAACAATAT
TCAAGAAGTTGAATTGGTGAATGAAAGTCAAGCGTGAAAAACTTGCTATT
ACACAAATTTGTCCTTTTCACTGCTAACCTGTCAAAGGTGGTTGTTGAAA
TACCCGAGTTTTATAAGGAATACTTTATGTAAAACCTTTCTGGCTTAAAT
AAACAAAGTTTAAGAACAAAATGACTCTGGAATTGTTGAATCTGACGCAT
TGAAGTCAAtcagttacacgtttttttacaagaatgctcctgaaatattc
ttacggtaatTCTTAGGTTTGGATCCAAATCCAGCCAaaatctacatttt
tttttttaaataacatccaaaatttttgaagctttcggatgttcttaact
tttcgagtcTTATATTCTTCtataaatattcttaacgtgttcttattttg
accattttgtgaatatttttgaccgttttcctaagaaatagggtattttt
gagtccacaaagctttaaaatgttcttaacttgttcttaacattttgacc
agagaagccttatgttcttatatagtttgttcttataaaaaaacgtttat
catgtaatacatacctgaagcaaaaatttggcatTTCTGAGGAACCTTTT
AGCACTGCTGGGGAATAATTGGCAATTCAATGGCagaatgctctaaaaat
aaaatagcatattcttagcttgagtagcaaatttccatgatggtgatatt
cttagcattgttttttggccaatttcatcataaatggTCCTATaaattat
attcttataaaaaaatggt
Run BLAST on NCBI

transcript from alignment at scaffold_226:463778..475354+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053154 ID=TCONS_00053154|Name=TCONS_00053154|organism=Clytia hemisphaerica|type=transcript|length=11577bp|location=Sequence derived from alignment at scaffold_226:463778..475354+ (Clytia hemisphaerica)
CTCAGTTCCAAAATGTTTTCTACTTTGAATAAAGGGGTATAGGTTTCCCA
CAGAgggaaaatgtcaaataaatagATTTGGCGGAGAATTTTTCGTTCTC
GAATTGTTCATAAAAGGACAAGCATATATTTAAACttgattgaattcaat
tgaaGTCTTTGCTTTGATTTTATGAATCGGATTAATTAATTGatgttcat
ttttgaaatttgcgaaacaaaaataaattatgaaaaatattttataagat
TGTATGTTTTATGATATTCTTTCCATTCAGATAAGCTTGGAATAtattat
tttgattggttgcAAAGACAAATTCTGTGTGAATATGAAGCAATTGACTG
TATAATCGATCGATTGAAATTCAAGAgttgttgaaaaatatttgtaaata
cGCAAATCAAAGTTGTTCCAAATATGCCATGATTGGTGCTCTTGTTTGTC
CGAAATCAAACTAAAATCACAAAGCAGTAGGCTTTTCGAATCTTTATTTA
TATTGCCGATTTTTATTGAACCAAAATTGATGGACTCATCACTTTTATGA
GAGCGTGTATGTAGGTCATTCCGCTTtctttatttgagaataagtgGCTG
TATGTGGTTTTAATAATGTGGGTCCTTAcactgaaattcattttgctgtT
GTTGATGGAGTTCGGACATTCGTTTGACGGTAAGTTAACTACGtcatcgg
ccctttttacaccggcaaCTTAACTACaatatcggccctttttacaccgg
caaCTTAACTACaatatcggccctttttacatcGGCATTAATTGCGCTGA
AGGTCAAATTTTTCCATCCCGATCCCTTACGCCGTCCCATATTACGCCAG
CGACAAGAATTTAACGCCAACAAGGAGCAGTGTAAAAAGGGACGATAAGG
TATTATTATTTTANCGACAAGAATTTAACGCCAACAAGGAGTAGTGTAAA
AAGGGAAGATTAGGTATTAttattttatggaattttggAGGTATTTGATT
TGATCggataatatttttttgaaatttttgttttcttctaaAGGTAATCA
AGGAACTTGGATGgacaaattttcttccaaataattttttacctaGTCAT
TTGACAAATGCAAGATTAGCAAAGAGACAACTTGTCATTTGtttttaaga
acaaaatatCTCTCTGGGATTTAAAGATACAGATTTTCCTGGTACCATAT
GATAGCTAAACTTTCCCATTCCCAGCCAAACATTCCTGGTGCAttttagc
ctggagatccatgctatgatttcttattctatatactgatggcgaaatat
atagcatggtatgggctgagagtttgaatttcccagatcctaataacggt
cgaaaacatagccaatcaaattttgttgttcttttactggtcacacttta
tTAGATAAagcgcaacttccgaaatttggtttttattttagtaagtgagg
acagcgctaaattcgaatttcccactgtaatttttttgaggcaaATCTGT
GCCTCACAGGTCATCCCCGTCCTGTATACATtggattataaaaatacagg
acgggtctcctgtctaggcTCATTTCGGCATCTTTCCGCTGTTTTTCTTC
TGATTATaacggcaaaaaaacttttttgactataCATGCAAATGTATGGA
CAACATGCATAGGCCTAAAGATAAAGCTTTTGTCGTTGCATGTTAAAGTT
GCAAAAGTAGAGTTTCCCNTGGACAACATGCAAAGGCCTAAAGATAAAGC
TACTTTTGTCGTTACATGTTAAAGTTGCAAAAGTAAAGGAATGAGAAAGT
TTACATCCTACGGTAGAGATAGTAATAAAATCTGTATCCTTTACACTTTA
GGAAACGCCAATTATGAAGGCTGTTACATTGTGTACAATCAAGGCCGATT
TAATGTCTCCTTTCAACTTCCAATCAATGAAACAGTTCAAAATGATAACC
ATACAAGCTTTCAAGAAGACTACAAAAACCTCTACGACATCCAACTGCTT
TACTCAAACAACTCACACAAATATAATTTCACGCCCGGGCGTTTTTGTCA
AGTTACATTCATAACGCCCCAAAACGGAACGGTTCAATGCCACTTGTTCC
CATTGGAAGGGCGTGATATGTATCATATTAAATTGGTCGCCCAACGGCTG
AGTGATGGGAAGATATTGATTGATCAATATATAAAATCTTATTTTAATAC
GTACCTAGACGGATTCAACTGTTCAATGGGTAAGTTTACACTNAATCATA
TTTTAATACGTACCTAGACGGATTCAACTGTTCAATTGGTAAGTTTAcac
gttttgtttttattaatatATGAACAAACGAtgtaaaaacaagttaagaa
cattttgaggctttgtaaaacacccgatttcttagaaaagacaattaaca
aaaatattcaccaAATGGTGgcataagaacatgttaagaacatttttaga
cttaaaactcaaaaagttaacaatatccatccgaaggctttaaaaaatgt
tcctataaaaatacgtgtattttttaaaacaCTTACCGACTNgacttaaa
actcaaaaagttaacaatatccatccgaaggctttaaaaaatgttcctat
aaaaacacgtgtattcTTTAAAACACTTACCGACTGGCACAGTACGCCCA
ATCATTATTTGATATtctgatggcggattggcggccgccttCGTTGAAGA
TCTAGAGTGACGGGTCAATTTCTCATTGGTGAGAATTGAATGATAGTCGG
TCTTCGGTTTTCCGCATCCCGCGTCGGGTTCAACGGCCCTTTGCGCGTTa
acctaaaaatatttcagtAATCCCAGAAAACAAAGGGTTAAGTTCAGACC
TCCCTTGGCAAATCCCTCGACGTGCTCTGGCGAAATTAGGTAATCCAAAC
CCTCCAGCTGTTGAAAGCCTTCCTTGATCTTTAGAGCGTTAGAGTGCACT
GCATGGATGGTGAGCGAATTTACTACAAGTCTCTAGAAATATTACTCTTC
AGCTAATTGGAAATACTCTACAAGGACGCAACTAGTACacaatagtaggg
ggaaatttgtaaaatagtgtgacttttttagtcaaagcacttgttataca
ttttttggaaagctaaggggtagggaatcaaaataacatgggtgccaatt
ttttttcggacactttgatgtgtttttcggacaaatatgacggtcttaGG
CAAAAATCATCgggtcaaaatttaatgaaaattttagcttgagaaaagag
agacctgttgtatatttttggaaagctctcaaaaaattaagattagagat
atattgcgagtatatgTGATTTCTGTACCTCATTCAAGATTCTGACCCTG
AAAATAgtgttttcagccagaaacagctgttttgtccactttttgcactc
tttgAAGCTCCTCTAACCCTtagctttcaaaaaatgtataacaagtgctt
tgactaaaaaagtcacacaattttacaaatttccccctactattgtGTAC
TAGTTGCGTCCTTGTAGAGTACTTCCAATTAGTTGAAGAGTAATTTTCTA
GAGACTTGTAGTAAATTCGCTCTTCATCCACGTAGTGATTCAATCATTAG
ACCTGTAGAGGAAAGCGCGTGTCTTATCATCCTTGAATCTATCTCTTAAT
TTTGACTGTTGATTACATAGCAGCGATAATCAGTAAGATCGAAGCTTGAC
CAGCTTGAAATCAAACACTAAACGTTGTCTAATAAGGCCTTTTTACACTG
TGTCACTGTCGTTAGTTGAGATTCTTCTTGAATACAcctaaattttgaat
aaaagttAACTCTCAATATCTTCCCATTAAACTTCTTTGTAATACTTTGC
AACTGAGCAGCAATGAAAAGAAAAgtatgaaataaattttgaaacactAT
TTTCACTAATTGCATTCCAAAGGATTCTTGTGTTTTTCACTTTAGATCAT
GGGCCAACCTATGTTAAACTTTTGGAGACTTATGATAATTTGATCAAATT
AGAATGGCAATATCCTTCGTACGAACGTCTATATCTCTCATCTACGCATA
ATGTCTCAATACGTGACAAACAAAATGTGACAGTTTTGGAGGTAAGAGCC
AACCCTACTCagcttttttatgaaaactCTACAATTTGTAAATActccag
aaaaaaaacctttgaaatggTGGTCACAATATCTTCCTCTATCTTAGCAA
AGTCACCTTAAAAATGTGTCCATCACCCCAACAAGAAAGGTTTCCCGAGC
TCTTCATTTTTGATAAGGCTGGATGTGACCACTTCTCCCAAAACTCGCTG
AAATTGATCATGATTTTatccttgaattttttttatatttaaggttttat
ttttacataagtatttccgtttcatatcagacacatatttcatatcagga
cagtgtcttgctattgttatattatgctgatataagcaaaaaagtgtttt
ccttttcctctttctgaccaatcttgctccacatccgtgtcgatgcaatg
tgaaaaagctaaaattgatgagtaagcgaacgatatcactcttaattaaa
aacaaaacctttaagatatAGAAGGAAAGCGAAATCTTGGTTGTTCttct
ggtttgaaaaatctcgtTAAACAAGTGAAAAGTAGATAATCtcttattta
taaaatatttgaataaaatctctcaaaaaaatgaaaatattgaaaatatt
ttgaaatttatcatagtttttacaaaaaatcttaATAAATTTCTGTCTAT
TgtcaaagttaatttttttgttttgtgaggGCTTGTTGTGATAGGAGCTA
CGTGATTTCGACttcaaattaataaaaaaaaaattttcctttcgaAATAA
TCAGACGACGTTTTATTGACTTTTAGCAACGTGCACTGCAGATGGATTTC
TAGCTAAATAGGTTTTAAActgaattaaagaaaaaaaacccgACAGGGCA
GTTTGAAATGAGAATTGAGTTGACTAACCTTTTCCTGACATCAGTCAATC
GAATAAGCGTAACTAGGAGATTGTTATTGTGACaaattatttttggattt
ttgatgaGGAGAAGTCACTAACACTAAGTTTACCCTTTGGGGAAATTTGT
ATTAGGTGGTTTTTAATATTCGAAGGATGTCTCTTGAGTTTCACGAGCTC
CTTGCGTTTCTACCATCGAGTTTGAAAACCCGAAGGTCTAGTGGAAAATC
TTTAACCTTTTTCATGggagaaaaagtgaagccttaagatttgcaCCGCT
TTTGGAATGACTGATTGAACCGAGcgctttcttttattttcacgctgcat
atttttcaaaactaatgataagttttattttcaatctaccatttgtgtga
aaaccatgtATTtaagatgggaaataagtggcttcgttCCCCATTCAAGG
GTTTCAACTGTAGCACCTTCCAGGCTTTAAACTCCATGGATTCGACTATA
ATTACTCTAATCAGCAACCTGAATTTTATTTCTTCTGAATTTCAAATaag
attaaaggttttattttctacataagtgttcccatctcatatcagacaca
tatttcatatcaggacagtgtctacctattgttatattatgcttatataa
acaaaaaaatgtttttcttttcctctttctgaccaatcttgctccacagt
cgtgtcaatccaatgtgaaaaagcttgatGAGTAAGTAAATGTTATCact
attattaaaaaaaaaacctttaaattagATTTAGTTTTGCATCTACTTTT
CCAGAAACCATGTCGATGTAGAAGTTTAGAATGTGAGTGTACCATATCTG
GTGACAACTTGATCGAACCTTGTCAAACATACACTTTATGTCTTCATACG
GTGTTCAAGTTTCATAAAGAGATGGAAAATTGTCAACCTTTTTACGCTAA
TCACACACAAGGTGAGGTGTAATCTTAAACTGTTCATAAAAcgaaatggg
ctattccagaaaagatTTGTGTCCCCTATTGTGAGGAGGTATTTTTTTGG
AGAGGatcccctggatttttttttcaattttcaggacccccttggatttt
CGACTTCgttatactgaccaccctggtTTTTCCGACTCCTCTTGCAGATC
ACCCTGGATTTTCACACTCCAAAAACCAGACCCCTCGGATTTCTattttt
ccagaccaccctgatCGTCACACCTTCTTAACATAGGGGGGCGACTATTT
CTGGAACGGcccctttttcatttttataccgaataataaactttaaaatc
ttaaacgGGCCATTAGAGCTCTACCTTCAGTAATCACTTAACTTTATGAT
GGAAATGCCCTTACTACAGCAACCTTGCCCAACTCAATCAATAACCTTCG
ACAAAAAATGCCCAACACTACGGAAAACCTATTGTGTACAAAGTAAAGAA
ACGTATTGAAGGAACTTTATAATACTGTCAAATGTAGCATTGGTGTAGTG
GTAACACAAAACACGTTTTTTTGAGAATGTAAATAAAAGACGAATAACCT
AAACCTAGTGTGTTTCTTGTATTGCAGGCGAAGAAAATTGTCAACAAACG
TCTCCAGAAGAAGGTAAATCCCTTTTCCCTGACTTTCTTTAAAGTTTTTC
AACGACATTTCCAATAAGTCACATTCCTGAGAAAATATTGAGAATCGAAT
AACGAAAAAGGTCATTTTAATTGTTACAGCTTGAAATGTTTGACGCTATT
TGACCCTTTTAGACTCTAGTCTAAACTTTCAAGAACTTCATGTCAGGCTC
CGTAGGGGATCTGGCCAGTTTTGGGGGCCGCTTTGATGATTTTCATCTAG
ATTTCGGATGAAAATTAACGTAATTTTTGAGCGTGGcgattggctaaagc
aaaacaatcacGCAAAATTTAACGTCAATTATAACCATAAACATGTCATT
AGAACTTGTtgcttttcaattttgtttccaagaaaaaaatttttcactgt
tcgttttcaattttttagctGAGCCAGGTCATCAGGTTCTAACAAAACCT
TAGTTGTgtaccatcatagaatttttcTCTCTACTCCGATATAATGTAAC
ATTTGTCAATATTTTCTTCAGACCAATGGAAGACTCTGTCAATTGTTGGG
ATTGCCACACCCATTTCTGTTGCAATTGCTATTATTGTTCTTGTCAAAAT
CTATCTACGGTAAGCTATCTGAACCTATATGGCTAGAAATAAGGAATTTT
GTGACCTTTTGAGGCCTTTTTTAAATTGTAAAGCTTTCTTATGTCAAAAA
ATTCGTACGTGGTGTCCAAATTATTTTCGATATAGACTTTGAAGTTCTCT
TCCGTTTTTTTGTGACCTCACTCTTCGGTATCTTTCACCTTTTAAACCTT
TGTAAGCCAAATTAATGAGAAATATGTAAATGATTTCTTTTAAATGACCA
TTTTTTGGCATGGAAATTACCTATGCATGCGTCTATGCATGAATTATTTT
GGCTACTATTTTTATATAACTGATTCCTATTCCTTTTGTTCTCTCACCAG
ACGTTGCAAGTCATCAAGTGTCGAAAGCGAGGACCCCGAGGTATTTATTC
TTCTAAATCTATTCAATCTATTTCCTCAATCTCAAAGCaatgttcttttg
ttttcatttttctgttccACCATAGCCGTACCTAGAATGatatgataaca
tctgaatttctgggcccagattcaaagatatctaaagggctacttagact
acacaatatattgacgagcaatatttgacaatatcgtTTTCGGACCGTAA
CGAAGTAAATAACAAGTGCTATATTATAAAAAGcaagcaatatatcatca
atatattgtctgacaatatattgtgtagttgTGTAACCATTAACATCAAA
ACTttgttgtgaaggaaaataTGAGAGAAATTCCAAAAACTACTATCTAC
CTAGAATAAACTGGCAAAATTGTCGTTCTTATAGAGTCAACTAACTGAAA
ATACAATGCGGTGAACATTCCAGCCACGGCTTTCTCACACTATGGTTCCA
CTCCAAATCTACTGTTTCCATTTGTTGATGATTAGGTGTTAAAAAAGGAA
TAGGAATCTTATCTTTAGGAACTTCAGTGAAgggattttttttcagatat
tcAGCTCCTTCACAATCATTTGCCTTAGAAAACATTACTTTTTACACTTT
AACTAATCAAGCATTTGACCGGGGGAAATAAATGCGATAATTCATTCACG
TGAAAGTCAGGGTATTCGAAAATCAGCTCGGCTCAAATTTTGTTTTACGC
TAACGGTTGTAATTCGCGTTAATAACTTGAGCAGTTATATAAGTGTCACA
ATGTAATTATTCTCTTCATTTAAGAGCCATGTCTAAAAGTCATTTtgcat
tcttttgttttgaaaatccgAACCTTAAGCCGTTTTTAATTTGCTCTAAA
CAAAATTGAGCCTAGCTATCTAAGATTAAAATAAGCCTTTTTCATACAGT
CTTACCGTGCAATAACCCATTTCAGAAATTTAAAATTGTGATGTCTTTTG
TTATTGAGAGCTGACAGTTTTTAAGAAatctaaaatatgtttttcGATAT
CCCTTtcttttttgcagattttcccAGTGGTGCGAGAAGAGGAAGAAAGC
ACCTTACGTCCAAGAAATCCGGACGGTTTAGAACCGATCTATGAAACTAT
ACCAAACATCAGTGTCCGAAACTACGATACTTTAAATGGTGTGACGTGAA
CCCAGAGGCTTGTGGTTACGTGGGATCGTCAGGGAGTTCTCTAGGTGAGT
GAGTTTCAAAATacagaaaataattttccttctAAAATACAGAGAATTAC
TTTCCTTACAAAATACAGAGAATTACTTTCCTTATAAAAAGATACAGAAA
ATTACTTTCCTTATAAGatactgaaaattatttttctcccAAGATACAGT
TAGCCAGTTTCCCTTCAAAATACAGCaacggttttccttcaaaaatacag
aaaatGATTTCCCTTTCCCTTCAAAAAccaggaaataatttttcttccaa
aatacAGGGAATGATTTTTCCTTCCAAAATACAGGGAATGATTTTCCTTC
CAAAATacaggaaataatttttcttaaaaaatacagggaatgatttttct
tccaaaatacAGGGAATGATTTTCCTTCCACAATACAGGGAATGATTTTT
CTTCCACAATACAGGGaatgattttccttcaaaaatacagggAATGATTT
TTCTTCCACAATACAGGGaagattttccttcaaaaatacagggAATGATT
TTTCTTCCACAATCCAGGGTAtggttttccttcaaaaatacagggAATGA
TTTTTCTTCCACAATCCAGGGaatgattttccttcaaaaatacaggaatG
ATTTTTCTTCCACAATACAGGGaatgattttccttcaaaaatacagggAA
TGATTTTTCTTCCACAATACAGGGaatgattttccttcaaaaatacaggg
aatgatttttctttccaaaatacAGGAAATAATTTTGCTATCGTTTTTTA
GTTTATAAGCCTAGATGTTCTTATTAATTGTTCCAATAAAACGTGTTTGT
TTGGGAACTCAGAAGGTTGCTTCCCAACCATTTGTAGCTTTCTAAACATG
AAGTTTGACGCACATTTCAAATGACTtcgtgttaaaaaaaattccttttt
tgatTTCAGGCTTCAGAGAATAAATCACAAACAAAGATGGAAAACCTTGT
TGATGAAAACAAAGATGAAGTAGCAGAAACGCAACGTTTTGGTACCTTAA
AACGCATTGGGATGTTGTCCTTCAGATTGGCTGTTTGTGGACTGTCATTG
GTGGACTTTTGGACAGATTTTCTTCTTGGTTTTGAGTATGCTGGACAAGG
GGAAGCAGTTTATGCGACTTTCACGTTTTGTTCACGTTAATACCAACGGC
GTTTGGAGCTTTATACGTTATACGTTATCTTCGACGAAAAGGTGAACTTA
CCATTgttgacaaaattctttttgtcTGCTGTTTATTCCTTCAAACGCAC
TTTGTGGTGCCTATTTGGTTGATCGAGGATACATTCAAAAAACAGCCTAA
GATAAATAAAAGTGaacgaaagaagaaagaaagagTTGAAAACGTCTTAA
CGATGTTTGATGCATTCGAAGCGTTACCTCAATTATCCTTCCAGCTTGCG
GTTTTGCTTGGAGATCAAGCGGGTATTGCACATTTCTGCAGCTTTTTACA
GTTCTCTCATCACTCTTCACTGGTGCTTGGAAACTAACCAAACTTATTGG
TATCGAGAAGACagctttgaaagtttttatgGTTGTTATCAATTTTTCAT
GGCTGTTGCCTGAATCTGTTAGTCTTGGATTACTTGCTAATAAAGCAAAG
ATTGTATCTTACATCGCTACACCAATCAAATTCCTAATCATCGCTATCCT
TAATCTGATATATGTCGGAAAATCGAATGctgtaaagaaaaaatgttCCG
ATTGGTTGAAGAGTCTCATTTTTAGTTCATTTGTGCCTTTCTATATGTTT
TCAAGGATAGGTGCTTATTTGGTGATCTTCTTGCTGTTCGCTCAAGTTTT
ACTTATGACGCTTTATACAGTAGGGCCATATAAcaatggtgtttttttta
aacgTAATGGTAATACAACTTGGGTTATCTTTGCTATAGGATTTGAGGTG
GATCTAGCAGTTGTGTACAATAATGGAGGAAATGTAACTGTGTACGCACT
CACCCTATTTGCAATTATTTCTAGCTTGGTGCTTTTATCtaaaagttgtt
gttgttgtagtcTTACACCTTTTCTTGATATCGAAGTTGAGAGGGACACG
AACAATATTCAAGAAGTTGAATTGGTGAATGAAAGTCAAGCGTGAAAAAC
TTGCTATTACACAAATTTGTCCTTTTCACTGCTAACCTGTCAAAGGTGGT
TGTTGAAATACCCGAGTTTTATAAGGAATACTTTATGTAAAACCTTTCTG
GCTTAAATAAACAAAGTTTAAGAACAAAATGACTCTGGAATTGTTGAATC
TGACGCATTGAAGTCAAtcagttacacgtttttttacaagaatgctcctg
aaatattcttacggtaatTCTTAGGTTTGGATCCAAATCCAGCCAaaatc
tacatttttttttttaaataacatccaaaatttttgaagctttcggatgt
tcttaacttttcgagtcTTATATTCTTCtataaatattcttaacgtgttc
ttattttgaccattttgtgaatatttttgaccgttttcctaagaaatagg
gtatttttgagtccacaaagctttaaaatgttcttaacttgttcttaaca
ttttgaccagagaagccttatgttcttatatagtttgttcttataaaaaa
acgtttatcatgtaatacatacctgaagcaaaaatttggcatTTCTGAGG
AACCTTTTAGCACTGCTGGGGAATAATTGGCAATTCAATGGCagaatgct
ctaaaaataaaatagcatattcttagcttgagtagcaaatttccatgatg
gtgatattcttagcattgttttttggccaatttcatcataaatggTCCTA
Taaattatattcttataaaaaaatggt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033549XLOC_033549Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053154-exon-scaffold_226-1491911889:463778..464456TCONS_00053154-exon-scaffold_226-1491911889:463778..464456Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1510915933:463778..464456TCONS_00053154-exon-scaffold_226-1510915933:463778..464456Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1575043694:463778..464456TCONS_00053154-exon-scaffold_226-1575043694:463778..464456Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1491911889:465629..466006TCONS_00053154-exon-scaffold_226-1491911889:465629..466006Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1510915933:465629..466006TCONS_00053154-exon-scaffold_226-1510915933:465629..466006Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1575043694:465629..466006TCONS_00053154-exon-scaffold_226-1575043694:465629..466006Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1491911889:467723..467868TCONS_00053154-exon-scaffold_226-1491911889:467723..467868Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1510915933:467723..467868TCONS_00053154-exon-scaffold_226-1510915933:467723..467868Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1575043694:467723..467868TCONS_00053154-exon-scaffold_226-1575043694:467723..467868Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1491911889:469532..469688TCONS_00053154-exon-scaffold_226-1491911889:469532..469688Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1510915933:469532..469688TCONS_00053154-exon-scaffold_226-1510915933:469532..469688Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1575043694:469532..469688TCONS_00053154-exon-scaffold_226-1575043694:469532..469688Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1491911889:470305..470340TCONS_00053154-exon-scaffold_226-1491911889:470305..470340Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1510915933:470305..470340TCONS_00053154-exon-scaffold_226-1510915933:470305..470340Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1575043694:470305..470340TCONS_00053154-exon-scaffold_226-1575043694:470305..470340Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1491911889:470849..470936TCONS_00053154-exon-scaffold_226-1491911889:470849..470936Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1510915933:470849..470936TCONS_00053154-exon-scaffold_226-1510915933:470849..470936Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1575043694:470849..470936TCONS_00053154-exon-scaffold_226-1575043694:470849..470936Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1491911889:471278..471317TCONS_00053154-exon-scaffold_226-1491911889:471278..471317Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1510915933:471278..471317TCONS_00053154-exon-scaffold_226-1510915933:471278..471317Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1575043694:471278..471317TCONS_00053154-exon-scaffold_226-1575043694:471278..471317Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1491911889:472345..472521TCONS_00053154-exon-scaffold_226-1491911889:472345..472521Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1510915933:472345..472521TCONS_00053154-exon-scaffold_226-1510915933:472345..472521Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1575043694:472345..472521TCONS_00053154-exon-scaffold_226-1575043694:472345..472521Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1491911889:473437..475354TCONS_00053154-exon-scaffold_226-1491911889:473437..475354Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1510915933:473437..475354TCONS_00053154-exon-scaffold_226-1510915933:473437..475354Clytia hemisphaericaexon
TCONS_00053154-exon-scaffold_226-1575043694:473437..475354TCONS_00053154-exon-scaffold_226-1575043694:473437..475354Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_226supercontigscaffold_226:463778..475354 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.235125	0.178332	0.20706	0	0	0	0	0.157222	0.154105	0	0.105872	0.278386	2.26659	2.17097	1.26094	0.98703	0.235343	0.562845	2.16617	2.45756	0.332731	0.868765	0.539179	1.00762	1.09392	2.27803	3.10164e-09	0.191154	0.149301	0.0716874
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053154 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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