TCONS_00053080 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053080
Unique NameTCONS_00053080
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1721

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053080 ID=TCONS_00053080|Name=TCONS_00053080|organism=Clytia hemisphaerica|type=transcript|length=1721bp
GAATGAATTCATGGAGTCCTCTGAAGTTATTGCATCACGAAAAGTCCAAG
GCAAGAACAAGACAAAGGACAATTATTATGCAAACGCAATATTCTTAAGC
CAAGATTCTAACCAATTTCTTGTCATTCAACAAGGCATGCATTGGAAGGC
GTATTATAAAGGAAGATGTTACCATTTGAGCTCATTAACCAAGTTATACA
GGCTCACAGATTATCAAATAGATATGGTGGTGTATACCAAGTCTGATGTT
GCATTTGGTGTGAATATTGGCACAGAGGTTTTTCCAAATTCTGATTCCCT
TTTGAAAAGAATGGAAGAACGTAAGAAAGGAAATCTTCAGAATCTAGTGA
TCGAAATTGAAAGTGACAATGATGAAGATTTCATCGAGAAAAACTTGTCG
ACACTTTACGGACAAGAGCCACTCAAACAGAGACTCAAGAAATTGGCGAG
ACGAGTGGTTTTTAACAAGAAAAAAGGCGAGACGGTTAAAAACGAACAAC
TTCATATGTTATTCACTGGTAATCCTGGCACTGGGAAGACATCTGCTGCC
AGGCTGATGGGCGGAATTTTTCAAAGGGCTCAATGTCATTGCCAGAAACC
TCGTGGTCGAGGTTCAACGGTCGGACTTGGTGGCAGAGCACATTGGTGGG
ACGGCGATAAAAACGATGGCAGCCATTGAAAAGGCAAAAGGTGGCATCCT
TTTTATCGACGAGGCCTACCGTCTCGTGCCCACGGGTCCGAAGGATTTCG
GCCAGGAGGTGATTGACACCATCATGCGGTCAATGACGGAGAGCCCAACC
AGTCAGCAGCAATGGCCAGTGTTTATTTTTGCTGGCTATGAAAAGGAGAT
GGATCATTTTGTGAAGGCCAACCCCGGATTTGCTAGAAGAATTAAACACC
ATTTGCGATTTGAGGATTTTAACCCAGAGCAACTCATGGAGATATCAAAG
AAAAGCCTTATCGATGATGGGAAACGATTTCCACTGCAAATTGGTGGGGT
CAAAGTCGAAGATTGTTTGTTGAaagctttccaaaaattgcCGAAAATTG
TTTTGCGTAAAAACAATGCGGCTCTTTGCGGAGACATTCTTGAATTTATT
CAGGAGTGTCAAGAGGATAGACTACCTTTGACTTGCTCAAAAAATGAGCT
GATGCGGTTCTCCGAAGAGGACATTGTAGGTGGTGTAAAAAACTTTCTGA
TGAAGTATCTTACACACAATAATGATCTCAACGACAAAGAAATACAAACT
GACTTTGATATCGTTGTTCCTGAAGTTGTTTTAAGGATGAACAATGATAT
ATTGAACGGGTCAGTCCCAACAGAGTGATGTTGTATATTTTTCATACTTT
TCTTACgttctttattttttggcttttttttacGAGTGATATTGTTTTAG
cacttctattttatttttatattgaagGAAACCCTGCCTCAAACGATTCC
CAGTCAGAACAAGGATAATAAAATGTgcttaaaactttcaaaactttcaa
aactctTCACGCTCTTATATGTTTCTTGGTAGAGAAGGAGTGATCAATCC
CAAGGTCAAAATTTACACCGAGTTGGCAGTTATCTacaaaattgctaaaa
atgggcaaaaaagaGGGCTGGAACTTTTGATCCGAGAAATATATGAAAAA
TCTgaatacatatttgaaatcagcaaagtttgaagttttagaaAAGCGTA
AATCGGAGATTTTTGTTCCTG
Run BLAST on NCBI

protein sequence of TCONS_00053080-protein

>TCONS_00053080-protein ID=TCONS_00053080-protein|Name=TCONS_00053080-protein|organism=Clytia hemisphaerica|type=polypeptide|length=225bp
NEFMESSEVIASRKVQGKNKTKDNYYANAIFLSQDSNQFLVIQQGMHWKA
YYKGRCYHLSSLTKLYRLTDYQIDMVVYTKSDVAFGVNIGTEVFPNSDSL
LKRMEERKKGNLQNLVIEIESDNDEDFIEKNLSTLYGQEPLKQRLKKLAR
RVVFNKKKGETVKNEQLHMLFTGNPGTGKTSAARLMGGIFQRAQCHCQKP
RGRGSTVGLGGRAHWWDGDKNDGSH
Run BLAST on NCBI

transcript from alignment at scaffold_225:256414..261880-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053080 ID=TCONS_00053080|Name=TCONS_00053080|organism=Clytia hemisphaerica|type=transcript|length=5467bp|location=Sequence derived from alignment at scaffold_225:256414..261880- (Clytia hemisphaerica)
GAATGAATTCATGGAGTCCTCTGAAGTTATTGCATCACGAAAAGTCCAAG GCAAGAACAAGACAAAGGACAATTATTATGCAAACGCAATATTCTTAAGC CAAGATTCTAACCAATTTCTTGTCATTCAACAAGGCATGCATTGGTAATC CTTTACTTTACTTTACTTTTGCATAGTTGGGTTCATTCCTCTCAAAGAAA ATGGATAGTCTTAGTAAAGACTGATTGGAGCATGCAAGAGCATGATTTTA AGCATCTTTTCAAATATAAATCCAAGTTTGATTGACTCAGGAGGCTGATA AGCTACTGTAGCAATGTGACTGTTCCTAATATGAAATGTGTCTTGACTGA AAATGACTTGAAAATGTTTTGACTAATGTCCCTATTCTAACTTTAAGGAA GGCGTATTATAAAGGAAGATGTTACCATTTGAGCTCATTAACCAAGTTAT ACAGGCTCACAGATTATCAAATAGGTAAATAATTCTTTCTTATAATAAAA ATATTCCCGGTAAACTGGTCTGAATTTTCAATATTTGGACTCGTTTCAAA CAAAGTTGTTGTAGTGAAGTCGAAAAAAATGAAAAACTGCCAGCGAATAC CGATTTGATTAACTAATGTTTTGAAATTCAAACTTTTACTTTAAGGGACG AAACTTTTCTGGTTTTTGCGAATTTTAGGCAAATTCTACTTTTGGTCATG AAATTTTCTTTAAATCCACCAAATAACAATTTGAGGGCGTATTTGTGTTT CATAAATTAGAAAAAAAATCTGGTTTTTGATTCAAAAAAACGAATGAAAA TCTAATTAAATAGAGGTAAAAGTCAATGGATCGCAAAAGTTTTTTAAAAA GCTAGATTCACAAAAGTTTTTCTCACTAAATGCAAAATTTTTGCAATTTT GTTGATTCGCTAAAATTTCTTCCCTTAAAGTATTTTATTTGCTAATCAGT GAGTCTTTTTATTTAACCTTTTCAGATATGGTGGTGTATACCAAGTCTGA TGTTGCATTTGGTGTGAATATTGGCACAGAGGTTTTTCCAAATTCTGATT CCCTTTTGAAAAGGTAAAGAATTTCTTTGTTCTCAACTCAAGTCTGTGTG TCTATCTTCCAAAATTTGGGGTGTTTTTTTTGCAAAGAGTGCCTGGGGGA TCCTAACCTTAAAATTTTTTAAAAGATTCTAAAGCCTAACAATATTCATA ATTATCTTTCCAACAAGGTATTACTTTTTACTATATCTTTTCTCCTTCCT TTATCTTCTCCATGAGCAATGAATGAAAAAGTACAGACTGCCATTTTTCA GGAACAAACTTTAACATTTCAACACACTGTGTTAAAAATCGAACCTCTTA TGTTGGAAATGAAGCCTGTATGCAATATAATTCTTAGTGTCACAAATTGC TTAACTTTGTAGAATGGAAGAACGTAAGAAAGGAAATCTTCAGAATCTAG TGATCGAAATTGAAAGTGACAATGATGAAGGTAAGGAAGATTTTTTTTCA GAATTTCTAAAGCATGTTTCAACACGCCCTACCAGAGACTTCTTTATTAT AAAAGACAAGGTAGCTTTGCATTGAAGTAACTTCTTTTTAATGAAAACAA AAATATCGCACTGCAATAGCTTCTTTTTAGACAAAGGAAAAAAAGTTGTT TTCAAATGTTTGCACAAACAAAAAGAGTCTACCTAGAACATGCCATTATA GAGAACTATGGTTTACTGACGATTACCTCGGAATTTTATGTTCTGTCGTG CAATTAACGATTAATCACTCGTAACAAAAGAGAAAATACCATAATTACCA TTTTCTCCTTTGTTACTCGTGATTAATCGTTAATTGCACGACAGAACATA CAATTACTAGTACAAATGCGCTGAAGTTATAAATTTGGCAGTAATAAGGC AATCACAAATTTATTTATCACTCTTATTAAGACAAAGAGTGTCATAGCTT TCAAGTGTGCTTGGAGAGTTAGTAGATAAGTTTCAACCAATGTTGTCTTG ACCGTAATCAAAATAATTATTACCTTTTAGATTTCATCGAGAAAAACTTG TCGACACTTTACGGACAAGAGCCACTCAAACAGAGACTCAAGAAATTGGC GAGACGAGTGGTTTTTAACAAGAAAAAAGGCGAGACGGTTAAAAACGAAC AACTTCATATGTTATTCACTGGTAATCCTGGCACTGGGAAGACATCTGCT GCCAGGCTGATGGGCGGTAAGAATTGTATTTACGTCAATCCCATTGACTT TTGCGAACCTTTCGCATATCTTTTAAAATAGAGTAAATCCATGCACCTTA CATGTGATCATCCCCCCCCCTAGGAAGGTGGGGGGAATCAGATTTTGGTA CTAGGGGGGAAGTGAAAATTACAAGCTTCATGGGGGAGAAATACAAATGG GGGGTATATTCAGTCCTCTGCCTGGTGGGGGGGGGGACAAAAACAAAAAT ACAGTAATTTCATAATTTTCATAAAAACTTTTATACTTCTCAAAAAAAGA TTGTTTCTTACACAATCTTTTAAAGTTATATAGAAATGTTATATACTATG CAATGGTAGAAATTAGATTAAGCAAACAATGTCTTTAAATTAGTTTATAA TCTTTATACAATATAGTTTGTTATGCATCAAGTGTGTTTAATCAAAATCG GGGGGTAAAAGTATAATTACAGACCTTCCTGGGGGACCTCCCTAAGTTGG GGGAGCACTGAATTTTAAAGATTGGTGGGGGGAGGCCAAATGGGGGATTT CGGCCTCAACTAGGGGGGGAGGCAAACAGCTGGAGGACACCATGTTTTAA TTTTCACGCATCTTGTAATTTCTTGTATATTTTTCAGCGTTTTTAATAAA AAATAGGTAGAAAGGCTAGTAGACTTATAGTACTTATAGTCTATATTTTA GCTAGATCTTGCGTCCAGGAGTTATATTTAACCTACACGAAGGACTCGCT GCTTAAAAGCATTTTTTACATATTTTTAACGATTCAATTTCGTGCTTTTT GGACCTACCTGGAGGTCCTATAAATTAACCTTTGTCCGTCCGTCCGTCCG TCCGTCCGTTCGTTCGTTCGTTCGTCCGTCTGTTACCAGCTTTTCTCGAG ATTGGCTCATTAGTTTTTTCTGATTTTTGGCACAATGATGCAAAATGGTA ATGCCCAAAATGCGACGGAGCCTGATTTTCGAAAAACATTTTATTCCGGT CAAAAATGCCGGAAATATGCCGGAAAAACCGTTTTTTTTGCATTTTCTCG AGATTTCATCATTAGTTTTTTCTGATTTTTTGCACAAAGATGCGTATTAG CAATGCTCAAAACATGTCCGATTCCGATTTTTGAGAACATTTTTTTTTCC GGCCGAAAATACCGGAAATATGCCGAAATCGCCGTTTTTGCAGATTTTCT TCGGACCTTTTCCTTATATTTCGGTGTTTTTTCTCTCAAAAGCATTATTT ATAACAATGCCCACCATCAAACACGGAACGTTCACTGAAAATCCGATTTA AGTTTTGCATGGATCATTCTATTTTCGCGAGTCAGCAAATTGCTGCTACA CGTTTTTTTTATAAGAACATCGAAAATTTTGGAAGCCCTCCGATGATCTA AACTTTTTGAGTTTTAAGTGAGTATTTTTGTGCAATCTCCTAAGAAATCG GGTGTTTTANGAAACTTTTTGAGTTTTAAGTGAGTATTTTTGTGCAATCT CCTAAGAAATCGGGTGTTTTAGAGTCCACTAAGCCTTAAAATTTTCTATC TCAAAAATGGCAAATATTCGAGAAAAAGCAAAATTTTATCCCATTTAATA ATCATTGATAGTTTTAGCCTTCTTTGTGCACCTTTCATGCTCTTCCACGT ATTCTAGGCGAATGTGACTAACGTAGGGTGCTTGGTTATTTGATGTAAAG GCTTTGGACAAAATAATTTGAAAAAGTTTGACATTTTCCACCTAAATGAT GGGACACTCGGTTGCCTATTAAAGGGGGAACCTAATTGCCATTTTTGGGG GGTTTAAAACGTGCGGTAAATGTAGACTAAGATCAGGCTATTTGGAGCAA TATAAGAGATTCTGCTTTTAACAACTGAAAATACTTTCAAAAGGGGGGGC TAGGGTCTATAGGGAATAGCTACTAGGTTCACAAAAAGTATAAGGATTTG GTTGCCAACTGAGTGTGTCCGTAAAAAGTGGATTTATCACAATTTTTTTT CCATTGTACTGTAGAGAGGAATTAAAGTTGAAAATCTTAAAACCTTACTC GACTGAATCAAGCCTTTACCATCCGTATCAATCAATATGATAATCTTATT CCATTTCAGGAATTTTTCAAAGGGCTCAATGTCATTGCCAGAAACCTCGT GGTCGAGGTTCAACGGTCGGACTTGGTGGCAGAGCACATTGGTGGGACGG CGATAAAAACGATGGCAGCCATTGAAAAGGCAAAAGGTGGCATCCTTTTT ATCGACGAGGCCTACCGTCTCGTGCCCACGGGTCCGAAGGATTTCGGCCA GGAGGTGATTGACACCATCATGCGGTCAATGACGGAGAGCCCAACCAGTC AGCAGCAATGGCCAGTGTTTATTTTTGCTGGCTATGAAAAGGAGATGGAT CATTTTGTGAAGGCCAACCCCGGATTTGCTAGAAGAATTAAACACCATTT GCGATTTGAGGATTTTAACCCAGAGCAACTCATGGAGATATCAAAGAAAA GCCTTATCGATGATGGGAAACGATTTCCACTGCAAATTGGTGGGGTCAAA GTCGAAGATTGTTTGTTGAAAGCTTTCCAAAAATTGCCGAAAATTGTTTT GCGTAAAAACAATGCGGCTCTTTGCGGAGACATTCTTGAATTTATTCAGG AGTGTCAAGAGGATAGACTACCTTTGACTTGCTCAAAAAATGAGCTGATG CGGTTCTCCGAAGAGGACATTGTAGGTGGTGTAAAAAACTTTCTGATGAA GTATCTTACACACAATAATGATCTCAACGACAAAGAAATACAAACTGACT TTGATATCGTTGTTCCTGAAGTTGTTTTAAGGATGAACAATGATATATTG AACGGGTCAGTCCCAACAGAGTGATGTTGTATATTTTTCATACTTTTCTT ACGTTCTTTATTTTTTGGCTTTTTTTTACGAGTGATATTGTTTTAGCACT TCTATTTTATTTTTATATTGAAGGAAACCCTGCCTCAAACGATTCCCAGT CAGAACAAGGATAATAAAATGTGCTTAAAACTTTCAAAACTTTCAAAACT CTTCACGCTCTTATATGTTTCTTGGTAGAGAAGGAGTGATCAATCCCAAG GTCAAAATTTACACCGAGTTGGCAGTTATCTACAAAATTGCTAAAAATGG GCAAAAAAGAGGGCTGGAACTTTTGATCCGAGAAATATATGAAAAATCTG AATACATATTTGAAATCAGCAAAGTTTGAAGTTTTAGAAAAGCGTAAATC GGAGATTTTTGTTCCTG

Coding sequence (CDS) from alignment at scaffold_225:256414..261880-

>TCONS_00053080 ID=TCONS_00053080|Name=TCONS_00053080|organism=Clytia hemisphaerica|type=CDS|length=4068bp|location=Sequence derived from alignment at scaffold_225:256414..261880- (Clytia hemisphaerica)
GAATTTTTCAAAGGGCTCAATGTCATTGCCAGAAACCTCGTGGTCGAGGT
TCAACGGTCGGACTTGGTGGCAGAGCACATTGGTGGGACGGCGATAAAAA
CGATGGCAGCCATTGAATTTCATCGAGAAAAACTTGTCGACACTTTACGG
ACAAGAGCCACTCAAACAGAGACTCAAGAAATTGGCGAGACGAGTGGTTT
TTAACAAGAAAAAAGGCGAGACGGTTAAAAACGAACAACTTCATATGTTA
TTCACTGGTAATCCTGGCACTGGGAAGACATCTGCTGCCAGGCTGATGGG
CGAATGGAAGAACGTAAGAAAGGAAATCTTCAGAATCTAGTGATCGAAAT
TGAAAGTGACAATGATGAAGATATGGTGGTGTATACCAAGTCTGATGTTG
CATTTGGTGTGAATATTGGCACAGAGGTTTTTCCAAATTCTGATTCCCTT
TTGAAAAGGAAGGCGTATTATAAAGGAAGATGTTACCATTTGAGCTCATT
AACCAAGTTATACAGGCTCACAGATTATCAAATAGAATGAATTCATGGAG
TCCTCTGAAGTTATTGCATCACGAAAAGTCCAAGGCAAGAACAAGACAAA
GGACAATTATTATGCAAACGCAATATTCTTAAGCCAAGATTCTAACCAAT
TTCTTGTCATTCAACAAGGCATGCATTGGAATTTTTCAAAGGGCTCAATG
TCATTGCCAGAAACCTCGTGGTCGAGGTTCAACGGTCGGACTTGGTGGCA
GAGCACATTGGTGGGACGGCGATAAAAACGATGGCAGCCATTGAATTTCA
TCGAGAAAAACTTGTCGACACTTTACGGACAAGAGCCACTCAAACAGAGA
CTCAAGAAATTGGCGAGACGAGTGGTTTTTAACAAGAAAAAAGGCGAGAC
GGTTAAAAACGAACAACTTCATATGTTATTCACTGGTAATCCTGGCACTG
GGAAGACATCTGCTGCCAGGCTGATGGGCGAATGGAAGAACGTAAGAAAG
GAAATCTTCAGAATCTAGTGATCGAAATTGAAAGTGACAATGATGAAGAT
ATGGTGGTGTATACCAAGTCTGATGTTGCATTTGGTGTGAATATTGGCAC
AGAGGTTTTTCCAAATTCTGATTCCCTTTTGAAAAGGAAGGCGTATTATA
AAGGAAGATGTTACCATTTGAGCTCATTAACCAAGTTATACAGGCTCACA
GATTATCAAATAGAATGAATTCATGGAGTCCTCTGAAGTTATTGCATCAC
GAAAAGTCCAAGGCAAGAACAAGACAAAGGACAATTATTATGCAAACGCA
ATATTCTTAAGCCAAGATTCTAACCAATTTCTTGTCATTCAACAAGGCAT
GCATTGGAATTTTTCAAAGGGCTCAATGTCATTGCCAGAAACCTCGTGGT
CGAGGTTCAACGGTCGGACTTGGTGGCAGAGCACATTGGTGGGACGGCGA
TAAAAACGATGGCAGCCATTGAATTTCATCGAGAAAAACTTGTCGACACT
TTACGGACAAGAGCCACTCAAACAGAGACTCAAGAAATTGGCGAGACGAG
TGGTTTTTAACAAGAAAAAAGGCGAGACGGTTAAAAACGAACAACTTCAT
ATGTTATTCACTGGTAATCCTGGCACTGGGAAGACATCTGCTGCCAGGCT
GATGGGCGAATGGAAGAACGTAAGAAAGGAAATCTTCAGAATCTAGTGAT
CGAAATTGAAAGTGACAATGATGAAGATATGGTGGTGTATACCAAGTCTG
ATGTTGCATTTGGTGTGAATATTGGCACAGAGGTTTTTCCAAATTCTGAT
TCCCTTTTGAAAAGGAAGGCGTATTATAAAGGAAGATGTTACCATTTGAG
CTCATTAACCAAGTTATACAGGCTCACAGATTATCAAATAGAATGAATTC
ATGGAGTCCTCTGAAGTTATTGCATCACGAAAAGTCCAAGGCAAGAACAA
GACAAAGGACAATTATTATGCAAACGCAATATTCTTAAGCCAAGATTCTA
ACCAATTTCTTGTCATTCAACAAGGCATGCATTGGAATTTTTCAAAGGGC
TCAATGTCATTGCCAGAAACCTCGTGGTCGAGGTTCAACGGTCGGACTTG
GTGGCAGAGCACATTGGTGGGACGGCGATAAAAACGATGGCAGCCATTGA
ATTTCATCGAGAAAAACTTGTCGACACTTTACGGACAAGAGCCACTCAAA
CAGAGACTCAAGAAATTGGCGAGACGAGTGGTTTTTAACAAGAAAAAAGG
CGAGACGGTTAAAAACGAACAACTTCATATGTTATTCACTGGTAATCCTG
GCACTGGGAAGACATCTGCTGCCAGGCTGATGGGCGAATGGAAGAACGTA
AGAAAGGAAATCTTCAGAATCTAGTGATCGAAATTGAAAGTGACAATGAT
GAAGATATGGTGGTGTATACCAAGTCTGATGTTGCATTTGGTGTGAATAT
TGGCACAGAGGTTTTTCCAAATTCTGATTCCCTTTTGAAAAGGAAGGCGT
ATTATAAAGGAAGATGTTACCATTTGAGCTCATTAACCAAGTTATACAGG
CTCACAGATTATCAAATAGAATGAATTCATGGAGTCCTCTGAAGTTATTG
CATCACGAAAAGTCCAAGGCAAGAACAAGACAAAGGACAATTATTATGCA
AACGCAATATTCTTAAGCCAAGATTCTAACCAATTTCTTGTCATTCAACA
AGGCATGCATTGGAATTTTTCAAAGGGCTCAATGTCATTGCCAGAAACCT
CGTGGTCGAGGTTCAACGGTCGGACTTGGTGGCAGAGCACATTGGTGGGA
CGGCGATAAAAACGATGGCAGCCATTGAATTTCATCGAGAAAAACTTGTC
GACACTTTACGGACAAGAGCCACTCAAACAGAGACTCAAGAAATTGGCGA
GACGAGTGGTTTTTAACAAGAAAAAAGGCGAGACGGTTAAAAACGAACAA
CTTCATATGTTATTCACTGGTAATCCTGGCACTGGGAAGACATCTGCTGC
CAGGCTGATGGGCGAATGGAAGAACGTAAGAAAGGAAATCTTCAGAATCT
AGTGATCGAAATTGAAAGTGACAATGATGAAGATATGGTGGTGTATACCA
AGTCTGATGTTGCATTTGGTGTGAATATTGGCACAGAGGTTTTTCCAAAT
TCTGATTCCCTTTTGAAAAGGAAGGCGTATTATAAAGGAAGATGTTACCA
TTTGAGCTCATTAACCAAGTTATACAGGCTCACAGATTATCAAATAGAAT
GAATTCATGGAGTCCTCTGAAGTTATTGCATCACGAAAAGTCCAAGGCAA
GAACAAGACAAAGGACAATTATTATGCAAACGCAATATTCTTAAGCCAAG
ATTCTAACCAATTTCTTGTCATTCAACAAGGCATGCATTGGAATTTTTCA
AAGGGCTCAATGTCATTGCCAGAAACCTCGTGGTCGAGGTTCAACGGTCG
GACTTGGTGGCAGAGCACATTGGTGGGACGGCGATAAAAACGATGGCAGC
CATTGAATTTCATCGAGAAAAACTTGTCGACACTTTACGGACAAGAGCCA
CTCAAACAGAGACTCAAGAAATTGGCGAGACGAGTGGTTTTTAACAAGAA
AAAAGGCGAGACGGTTAAAAACGAACAACTTCATATGTTATTCACTGGTA
ATCCTGGCACTGGGAAGACATCTGCTGCCAGGCTGATGGGCGAATGGAAG
AACGTAAGAAAGGAAATCTTCAGAATCTAGTGATCGAAATTGAAAGTGAC
AATGATGAAGATATGGTGGTGTATACCAAGTCTGATGTTGCATTTGGTGT
GAATATTGGCACAGAGGTTTTTCCAAATTCTGATTCCCTTTTGAAAAGGA
AGGCGTATTATAAAGGAAGATGTTACCATTTGAGCTCATTAACCAAGTTA
TACAGGCTCACAGATTATCAAATAGAATGAATTCATGGAGTCCTCTGAAG
TTATTGCATCACGAAAAGTCCAAGGCAAGAACAAGACAAAGGACAATTAT
TATGCAAACGCAATATTCTTAAGCCAAGATTCTAACCAATTTCTTGTCAT
TCAACAAGGCATGCATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033522XLOC_033522Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053080-proteinTCONS_00053080-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053080-exon-scaffold_225-1575043694:261737..261880TCONS_00053080-exon-scaffold_225-1575043694:261737..261880Clytia hemisphaericaexon
TCONS_00053080-exon-scaffold_225-1575043694:261407..261483TCONS_00053080-exon-scaffold_225-1575043694:261407..261483Clytia hemisphaericaexon
TCONS_00053080-exon-scaffold_225-1575043694:260818..260905TCONS_00053080-exon-scaffold_225-1575043694:260818..260905Clytia hemisphaericaexon
TCONS_00053080-exon-scaffold_225-1575043694:260401..260468TCONS_00053080-exon-scaffold_225-1575043694:260401..260468Clytia hemisphaericaexon
TCONS_00053080-exon-scaffold_225-1575043694:259665..259850TCONS_00053080-exon-scaffold_225-1575043694:259665..259850Clytia hemisphaericaexon
TCONS_00053080-exon-scaffold_225-1575043694:256414..257571TCONS_00053080-exon-scaffold_225-1575043694:256414..257571Clytia hemisphaericaexon
TCONS_00053080-exon-scaffold_225-1510915933:261737..261880TCONS_00053080-exon-scaffold_225-1510915933:261737..261880Clytia hemisphaericaexon
TCONS_00053080-exon-scaffold_225-1510915933:261407..261483TCONS_00053080-exon-scaffold_225-1510915933:261407..261483Clytia hemisphaericaexon
TCONS_00053080-exon-scaffold_225-1510915933:260818..260905TCONS_00053080-exon-scaffold_225-1510915933:260818..260905Clytia hemisphaericaexon
TCONS_00053080-exon-scaffold_225-1510915933:260401..260468TCONS_00053080-exon-scaffold_225-1510915933:260401..260468Clytia hemisphaericaexon
TCONS_00053080-exon-scaffold_225-1510915933:259665..259850TCONS_00053080-exon-scaffold_225-1510915933:259665..259850Clytia hemisphaericaexon
TCONS_00053080-exon-scaffold_225-1510915933:256414..257571TCONS_00053080-exon-scaffold_225-1510915933:256414..257571Clytia hemisphaericaexon
TCONS_00053080-exon-scaffold_225-1491911889:261737..261880TCONS_00053080-exon-scaffold_225-1491911889:261737..261880Clytia hemisphaericaexon
TCONS_00053080-exon-scaffold_225-1491911889:261407..261483TCONS_00053080-exon-scaffold_225-1491911889:261407..261483Clytia hemisphaericaexon
TCONS_00053080-exon-scaffold_225-1491911889:260818..260905TCONS_00053080-exon-scaffold_225-1491911889:260818..260905Clytia hemisphaericaexon
TCONS_00053080-exon-scaffold_225-1491911889:260401..260468TCONS_00053080-exon-scaffold_225-1491911889:260401..260468Clytia hemisphaericaexon
TCONS_00053080-exon-scaffold_225-1491911889:259665..259850TCONS_00053080-exon-scaffold_225-1491911889:259665..259850Clytia hemisphaericaexon
TCONS_00053080-exon-scaffold_225-1491911889:256414..257571TCONS_00053080-exon-scaffold_225-1491911889:256414..257571Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_225supercontigscaffold_225:256414..261880 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.42172 0.406079 0.0878149 0.12996 11.3873 8.99171 18.515 18.3618 8.82692 10.0641 5.54509 5.98006 3.57696 3.52452 2.2064 2.38962 2.37593 1.16203 1.63473 2.21158 2.20375 2.79963 0.768922 1.50736 2.12802 2.38368 1.06676 0.888964 0.562242 0.769736
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053080 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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