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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048922 ID=TCONS_00048922|Name=TCONS_00048922|organism=Clytia hemisphaerica|type=transcript|length=3022bp
acctTTGGACCTTCCTTGTTCCACATTCCTGCAAACCAAAGTCTGAGAAA
AAGCTCGAGACCTGCTCTATAAAATTTGATCATTACAAATCAACAAGAGC
AGCAAACTGGTAGATGAGTTCTTGtcattgcaattataatttacaAACAA
AATTCATCCGACACGTGCGACGAAATTCGAGAATGTATCACTTAGCAAGC
TGCTTGGCAGCAGCTGCCAtcggacaaaaatattttgatcttcCATGGTT
AACTGCATTAGCCGGCGGTGCTGCCGCATATATTCTCACTGGAGGTTGGA
AATGGGTACGCTTGTTTTATCTGACTATCGGTAGAGATCTGCAACTTGGA
AAAGTATTCATTGGTGTAGAAATGTTTATCCGAAATCTATCCAAGAAAAA
CATGGTCGTAGCTGATGTCTTCTCCGAAACTGCAAAGAAATTTCCCAACA
AACCAGCATTCGTTTCAGTTGATACAGGAGCCTCCATGACCTACCAGGAA
GCAGAAGAATTCAGTAACAAGATTGCAAACATTTTCCAAGAAGCTGGCTA
TAAGAAGGGTGATGTAGTTGCTTTATTGATGGAGAATTGCATCGAATACA
TCCCGATTTGGATCGGATTGACTAGAATTGGTGTCACTGTATCTCTTTTG
AATTACAACGTCAAAGGGGAAGGCTTAAAACACTGTATCACAGTGGCTGA
TTGTAAAGCTGTTATCTATAGCCCAACACTTGAAGGCTCTTTGAAGGACA
TCGAATCTTCTTTGGGAAACATGAAATACTACATGTTTGCAGATAGTGCT
GGTGAACTAGATCGAGCACAAAGTTTGAAGAAGTTGATGAATTCTGCATC
TTCTTACGCTCCAAGCAGACATGCACCACTCTCAATCACCGATAAAATGT
TGTTCATCTACACATCGGGTACCACTGGATTACCTAAAGCTGCTGTAATC
CGAGGTACAAGATTCACATTCATGAGCTATGCGGTCGCTCATGCTATCGG
AGCGAAAGCGGACGATGTTCTTTACAATACTTTACCACTTTATCACAGCA
ATGGCGGTATTGGGCTAGCTGGCCAAATCCTTTACACTGGCAGTACTTTG
GTTATCCGTAAGAAGTTTTCAGCAAGTCGATTCTTTGAAGATTGTTATAA
ACACGATGCGACTATCGTCAATTACATTGGAGAGACATGCCGGTATCTTC
TATCCACGCCACCAGGAGAATTCGACCGCAAACACAAAGTTCGAATTGCT
ACAGGAAACGGCCTACGACCTTCCATTTGGGACGACTTCAAAGATCGCTT
CAACATTGGTATGATTGCGGAATTTTATGGTGCCACGGAGGGCAATGCAA
ACATGATCAATAACACTGGCAAAAGTGGAGCTGTTGGATATAATTCTGTT
CTCTTCCCTTTCGTTTACCCAATCAAGATTGTCCGTATCGATAAAGAAAC
TGGTGCTTTACTTCGAGGACCAGACGGTTTGGCCATTCCATGTGGGCCAG
GAGAGGTAGGGGAACTAGTGGGTAAAGTAAAAACAGACGCCATACATCAA
TTCGATGGATATGTTAACCAAACCGCCACTAAGAAAAAGATCGCGTACGA
CGTCTTCAAGAAAGGAGATTCAGCTTTCATGACCGGAGATGTTTTGTACC
AAGATGAATTGGGATATTATTTCTTCCAGGATCGTATGGGAGATACCTTT
AGATGGAAAGGAGAGAACGTGTCCACCAATGAAGTTGAAGGAGTGATCAG
TAAAGCATTGGAATTGAGCGATGTTTGCGTTTACGGTGTCGACGTTGATG
GTGTGGAAGGAAAAGCTGGTATGGTCATCATGTCCGACCCTGAACGAAAG
GTCAAGATCGAAGATGTGTACCGCCTTATAAGTCGTTCATTACCTGCTTA
CGCATGCCCCATTTTCCTTCGTATCACGACTGGCGACCTGGAGAAAACGT
CAACGTACAAATACAAGAAAGTGAAATTACGCGAGCAATTTTATGATCCC
TCGTTGTGTGGAAGCGATGAATTGTTTTATTTCAATGGAAAGGAAAAGAC
ATTCTTACCCATCACTTCCGATGCTTTTGCCCAAattaaaaatcgggaaa
ttcgATTTTAGGTCTTTTTTTATCCGCGATAGTTTTTTTACATGTTGTGC
AGTAAAgggatttttttatcaattgcATTTTTGTTAAcctttgttatatt
tttttgtatttagtATTTTATATCACCATGTTAATCCTGGAAAATTCATG
AATATCACCGTTAACTCAAGTTTTGGTTTGAAATACTGTTAATTAAAAAA
TGTAGTAAATGACCAGTTTGCAATGATTATTTGATTCTTTTGAAAGTGGA
ACATACACAATCGGTGATATTCAaggattaaaattttttttttgaataca
tcttttcgaccgtagccgccggttgccgcgcgggcatttttttgtccacc
ctaaaaccgtcccagtcttttttcgcacctatagacaaaagaaaaataga
cggggatggttttagggtggtaaaacggaccaAAAATGcctgcgcggcaa
ttggcggctacgctCGAAAAGGTATATTTTATAATGggaaaaatataaat
gaaaatataaagatCCAGCATGAATTAATTGAAGTCTGTCTCACAATAAT
TTACAGCAGAGAGAAAGGATAGGGTATTTAATTTGCATCGGTGGTTtacg
gtggtaaaaaaatttattaataagcaaaaaaaagcaATCTGTAAATAAAA
GCCCTAAAATAgcacaactttgaaaaaaaaaattaaatgaatcgACTTTT
TCGTAATGTATAACCATGAAGATAATAAAAAGAGACGTCAACGCCTTTTA
TTCTATTCTGTCTTAAATGTACtaacacactttgtaatacctgacACAAT
TTGTATTACACCTTGACGCACTTTGCAATAATTGATCAGTCAtactttgt
aataaaaatcaaCGCAGTTTGTAATACGAAAAactgacacactttgtaat
aaaacATACATTCAAATCAGCG Run BLAST on NCBI transcript from alignment at scaffold_148:195259..205915- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048922 ID=TCONS_00048922|Name=TCONS_00048922|organism=Clytia hemisphaerica|type=transcript|length=10657bp|location=Sequence derived from alignment at scaffold_148:195259..205915- (Clytia hemisphaerica)
ACCTTTGGACCTTCCTTGTTCCACATTCCTGCAAACCAAAGTCTGAGAAA
AAGCTCGAGACCTGCTCTATAAAATTTGATCATTACAAATCAACAAGAGC
AGCAAACTGGTAAGAGTAGCATTATTAGCCTGTTAGCATATTAGTAGCAT
ATTTACATTTAAGATTATCTTTTCTGATTATATTATAATTTCAAGCACCT
TCCAGATGAGTGACAATTTTGCAAACTTGACTGCTTTGACTGACACACAC
CCCTTTTTCTTTTTTTATAAACCAGGAGACTCACCCACTTGATACGATCA
ATAACTTTTTCCAATTTATGACTAAACAATAATCAATCGATTGTTTAGAT
ATCAATTGATTCCGATAATCGATAGGTATTCAAGACAATATCTAAATTTT
TTGGATCAATTGGCTATTTGCTCTCTACTGGCTTTATTATCGAGTATGAT
TATAGTCCTTCATCTTTTTTAGAGTCGATCTATACCTAGTCAATTGAGCT
TCCCTTATAAAAATCCCGATTATATTGTCTATTAATTACAGGACCCTGCC
GACGCACCGGACTGTCCGGTGTATTTGTCCGGTGGCAGAAAGTATCCTTT
CGCTACACCGGACGCAATAAGTCCGACGTCAGTCCGGTGTTGCATACGGG
GAATTCTGGCCGCTGGACATTTATGTTTTGATTGTCCGGTGGAAAAAAGT
ATCCTTCTAAGACACCGGACAACCGACTTCCTTTAGTAGCCTTTAGTCCG
GTGTAGAGATGGTCCGGTGGTAAAAAAATTCTCATTTTACACCGGACTTT
CGCGTGTCCGGTGTTCGTTAAGTCCGGTGCGTCGGCAGGGTCCTTTAATT
ATCAGAATCAATCCAAATCTTATTCATCGATTAGTTATCAATTGGTTATT
GAAGGACCCTGCCGACGCCAGACCAGATGGCTCAGATCAGTTATATACAG
ATTTACCTACATAGCAATAGTTTCAATATTCCTCTGATGTTTCTATTTTT
CCAAAAACGAAAACTTTTCTTCTATCTTACACCCCTGCCTCAGGCAGTTA
GACACACTAGCGTCCCGCCGAAATGCGTATCAAAGATTAATGCTGCGAAA
GCGCTATATCGTTTACCTGACTCTTAAGCAAAAAAATGTGTCACAAAAAT
TCTAAAGGGATTCATGAAAAAATAACACGGCGCTTTTTAATGAAATTAAC
ATTCTCAAAAACTATGAGAAATTGCTTAAAATTTGAGAACTAATTTGAAG
ATCAACTTCCCAAGAAAAAGATCTACGGGGGAGACGGAACCCACCTAGCT
AAATCCGCGCACTGCCCGATAGGCTATTTCCTGGAAATTTTGCCGGACCT
CAAACACTGACCCATTCACATGTGCAAAATTGTTTTTACTTAGCGTTTAA
ACAAGGCCTTAAAATTCAAAGCGCTGTCTAATTTTGGTTGGTGGATTTTG
GCTGTGGCACGTTTTATATTGTTTCAAACCTTCAAGTTTTAATTAATTGT
TTTGCAAACTTGATTCAGGTAACTCTCATCCTTGTTGTTGCAAATACATC
CTGTAGATGACTGATGTTGTTTTTTCTGAAAGCTTGATTTCCTAGTGTGA
CTAACTGTCAGGTACAACTACAGTGCATTTTACCCAATGTTTCTGACCCT
TGCAGTTGTAGTGTAGTTTGATATCAAATCTTATTTTTTTGAGGGCACCT
GAAAATGAGCCCAAGATGTCGACACAGTGTTCAAAACAAATCAAAATGAG
TGCAACTGAAAACTACCTTAAATGGTATTAAATTTCGCGTGTTACAAATT
TTTTACGTGTATTGAATTTCGCAATACAGTAGTCAATTTCTGGAAATTTT
CATGTGTATTAAATTTCCCGATTCACTACATTGGGCATTTTCAAGAAGTA
GGAATAAAGAAAGATGACTAATTTTGCTTAAAAAACATATTGGGTGTAAA
CATATCAAAGATAGTAACAAAACTAGTGACAAAAATAGTAACCAACAAAA
AAATTCGCCATTTTCTGTCTATTTAAAAAGTTTTAGCGTGTATTTAATTT
CGCGATGTTGAAATTTTGAAAAATTTAAACGACAGAATTAAATTTCACGA
AATTTGACCTAAAAAATTGCAAAATAAAGTACCCGCAAAATTAATGATTA
AGGTATAAAGATACATCAGATTTTTACTGTCAGACTTCGAATTCAGCAGT
CTTAAAAACACCCTTAAAGTGTATCCAGCTAAAAAAAAGTGCATCTCAAG
GGTCTCAAAAAACCTACTCTTAAGGGTGGCACATGCCGTTTGTCAGATCA
TGAGTGCCCTCCTCCCCAGGTGAGGCTTTCAGCAAAACTAACAAAAGAGA
AATAGAATTTCTATTCTTCTGCAAGTAGCACAATTCTTTTCTGACTATAG
TTTTTTGCTCAACCTCTATAATCTCTTGTACTTTCTGGTACTTTCCAAGG
AAAATCAACCAATATAATACATCCCAAAATCAATCAATCAATACAACCAA
TCCAATTTCTTGTATTTTCCAAGGAAAATTGCTTATAAAAGATAATGTTC
CAAGAGATTAACTAAATTATTTCTCCAGTTTTCTAACTAATTTCTCCAGC
ATAAATTTTTCTAATGGCACTTTTGATTCTTTCAAAAAGATTCTACCATT
CTTTGCCTTTTTTAAGACAGTGATTTTTATAGAAAAGTATCAGAAATTTG
CTTGTAGATAATTTTCTTAAAAAATTTGAATTATGTTAATATTTTTTCCC
TTGAAAAATACAACAAATTGTATTGGTTGACTTCCTTGAAAAGTACAAGA
ATTTGCTTGTAGGTTGGGATCATGTGCAGTTTACGGTGCCCATGGTCAAA
TTGTTGTCCAGTGGGTTTCACTAGTCCAGTTGTAATCAACATCTGTAATT
TTTGAGGGACTTCTATTTCTGAAGATTTGTGAGAAATAACTTTGGTACAC
AATTATATTAAATATGATCTCTCGCTTACCAGGCTCCTTTTGTTGAGCGC
TATCTAATACTTTTACGTGTAAAAATGAAATACAGGATTGCTAATATTTC
TCATGTTAATGATAAAAAATATATCATTACTCATTTTCCTTGAAAAATAC
AAGGGTTTCCTTTAGCAGGTTGTTTCCCTTGCCCCAAATACAAGAATTGT
GTTTATCTAATTTTCCTTGGAAAATACAAGAAATTGTTTACAGTTGATTT
TCCTTAAAAGTATAATGCATTTTCTTTGCTTAGTTTTTCTTGGAAAATAC
AGGAAAATATTTTAATTTATGTAACTTTCAATGGGTTGTTCCATAATATT
TCCTTACAGAGAGGTGGAAGAACCTTTTCAAGTCAAAACAATTCTTAAAA
ATGACAAAATTTATTGCAAAAGACCCTTGGAAAAAATTATTTTCATGTCT
TTAAGTGAGGGTGGGCGAACTAAAATCAGTCGTTCACCCCCCCTTGGAAA
TTTTTAAGAAACACTTCTTTTGACTCCCTGGAAATTCTTCTTGGATTACC
CACTGGAAATGTTCGTCCACCCCCCTGAATGGTTATAAAATGGAATGGGT
CAATATAACCAGAAAATATTATTGTTCATTTCCCTTGACAAATACAAGAA
TTTGCTTTAGGTTGTTTCCCTTGCCAAATACAAGAAATGTGATGTGTGTA
ATCTAATTTCACTTGGAAAATACAACAAATTGTTTACGCTAATTATTAAA
AGTTATTAATACTATTAATAGCAATGCCCACCATCAAGTGCGTTCCAATT
TTCAATGAAATTGATTTTTGAAGCCGGAACTATTCAAAAATCGCTGGAAC
AACCTATTTTCGCCGGAAAGACAGTATTTCTTGAATTTCTCGAGCTGTAC
TTTATATTTTTTTATGAAATTTTGCACACTGATGCAAAATGACAATACCT
AAAATGAAACGGAGCCAGATTTTCGAAAAACATTTTTTTCAGGCTGCCGG
AAAAACTGTTTTTTTTGGCATTTTCTCGAGATTTTATCATTAGTATTTTC
TGATTTTTTGCAGAAAGATGCGTATTCGCAATACTCAAAATATGGCTGAA
TCCGATTTTTGAGAACTTTTTTTTTTAAATCGCCGTTTTTCTGGATTTTA
TTGGACTTTTTCTTTACAATTGGTTGTTTTTTTCATTCAAAAAATTATTA
ATAGTAATATGCCCACCATCAAGTATGTTCCAATTTTCAATGAAATTGAT
TTTTGAAGCCGGAACTATTCAAAAATCGCCGGAACGACCTATTTTCGCCG
GAAAGACAGTATTTCATGAATTTCTCGAACTGTACTTTATATTTTTTTAT
GAAATTTTGCACACTGATGATAAATGACAATGAAATACCTAAAATGTGAC
CGAGCCCGATTTTTGAAAAACATTTTTTTCCGGCCAAAAATGCTGGAAAT
ATGCTGGACATTTTCTCAAATTTTCATCCTTATTTTTCTCTGATTTTTTG
CAGAATGATGCGTATTCACAATGCTCAAAACATGACCGAGTTCGATTTTT
GAGAAAAATTTTTTTTCCGGTTAAAAAAGCCGGAAATTTCTGTTTTTGCA
GATTTTCATTGGATTTTTTTCGTTTAATGTCTTTGTTTTTTTCAAACAAA
AACATGATTTATAAGAATTTCCACGATTAAGCATGGTTCAATTTTCAATG
AAACTGATTTTGGTACAGGAACTTTCTAAAAATTGACAGAACAGCCGAAT
TCCATGAATTTCTCGAGTTGTTCTTGTATTATTCTGCATTTTCATACTAT
TGTTCTCATTTTTCAATTGTCTTATTACATCAATCTTCAGGTAGGTCCAT
TCAGCATGTAGCTTGTTAAATTTGTCATTCTTTTTATCTCTTTTAAGTAA
ATGCGGGATTCTTATTAAGATTCACTCCCTCTCTACTTTAGAGGAATAAT
TGAGTTGGTTTGCAAGCAGAAAATTATGAAAGAATCTCTATTTTGAATGC
ATTTATGGCTTTTGAGTAACAACATTACTTAATAGAGATACTACTTATTG
CCCTTGTATCATTTGTAATTTGAGACCAAAATAAAGTAAGACATAACTTA
GTTAATCACAATCCTTTATTACTTAAGTCTTAAAAATTATTTAAAATCTT
TTTACTTTAATGATAATCTGCTCAGATAAATGCTTAATATTAATGATTTG
TCTCTAATTTTTCCAATAGTTACTATTGAAACATATCTAAGTTTGTCCTA
AAATTCGTTTTAAGGAGCTACTTTATGTTTTATAGTGAGTTAATAGTTTA
GAATGAATGAACTCCTCAAACATTAACCAAGGATACTTCAATGTTGTGCA
TATTTCCTATAGTATTCAACCAATGGCGAAACCCTATTCATGATTTTGTA
CCATTCTAAAATCACTGTTCCAGGTATTGGAGACTCTTATAAGTTAAAAG
ATAGGTCCAGTGGAGGAGGGGTAGGATTTGTAGAAAATCNTCCAGGTATT
GGAGACTCTAAGTTAAAAGATAGGTCCAGTGGAGGAGGGGTAGGATTTGT
AGGAAATCAGCTCGTATACTTGTGTTTATCAAGTCCAAAGATATACATCT
CCTGTATTTTTTGTGTGAAGGATTAGAGCCTGACTGTTAAACAATACAGT
CCTGTATTTCTGAAGGACTATATTCTTGCCTTTTAGAAACTAAATATTCC
AGGAAAGAAAATGGTTTGAGCTTTAGAACTTTGGAAAATAGAAAATTTCT
AATAAGCTTATTTATCAGTCAAAATTTTCTGATATATCGTGCTTGAAAGA
GAGTTGTTCTATTTCGAAGTCATGTTTTTTTCAAGTTATTTTCTGTGTTT
TATATCCACAGGTAGATGAGTTCTTGTCATTGCAATTATAATTTACAAAC
AAAATTCATCCGACACGTGCGACGAAATTCGAGAATGTATCACTTAGCAA
GCTGCTTGGCAGCAGCTGCCATCGGACAAAAATATTTTGATCTTCCATGG
TTAACTGCATTAGCCGGCGGTGCTGCCGCATATATTCTCACTGGAGGTTG
GAAATGGGTACGCTTGTTTTATCTGACTATCGGTAGAGATCTGCAACTTG
GAAAAGTATTCATTGGTGTAGAAATGTTTATCCGAAATCTATCCAAGAAA
AACATGGTCGTAGCTGATGTCTTCTCCGAAACTGCAAAGAAATTTCCCAA
CAAACCAGCATTCGTTTCAGTTGATACAGGAGCCTCCATGACCTACCAGG
AAGCAGAAGAATTCAGTAACAAGATTGCAAACATTTTCCAAGAAGCTGGC
TATAAGAAGGGTGATGTAGTTGCTTTATTGATGGAGAATTGCATCGAATA
CATCCCGATTTGGATCGGATTGACTAGAATTGGTGTCACTGTATCTCTTT
TGAATTACAACGTCAAAGGGGAAGGCTTAAAACACTGTATCACAGTGGCT
GATTGTAAAGCTGTTATCTATAGCCCAACACTTGAAGGCTCTTTGAAGGA
CATCGAATCTTCTTTGGGAAACATGAAATACTACATGTTTGCAGATAGTG
CTGGTGAACTAGATCGAGCACAAAGTTTGAAGAAGTTGATGAATTCTGCA
TCTTCTTACGCTCCAAGCAGACATGCACCACTCTCAATCACCGATAAAAT
GTTGTTCATCTACACATCGGGTACCACTGGATTACCTAAAGCTGCTGTAA
TCCGAGGTACAAGATTCACATTCATGAGCTATGCGGTCGCTCATGCTATC
GGAGCGAAAGCGGACGATGTTCTTTACAATACTTTACCACTTTATCACAG
CAATGGCGGTATTGGGCTAGCTGGCCAAATCCTTTACACTGGCAGTACTT
TGGTTATCCGTAAGAAGTTTTCAGCAAGTCGATTCTTTGAAGATTGTTAT
AAACACGATGCGACTATCGTCAATTACATTGGAGAGACATGCCGGTATCT
TCTATCCACGCCACCAGGAGAATTCGACCGCAAACACAAAGTTCGAATTG
CTACAGGAAACGGCCTACGACCTTCCATTTGGGACGACTTCAAAGATCGC
TTCAACATTGGTATGATTGCGGAATTTTATGGTGCCACGGAGGGCAATGC
AAACATGATCAATAACACTGGCAAAAGTGGAGCTGTTGGATATAATTCTG
TTCTCTTCCCTTTCGTTTACCCAATCAAGATTGTCCGTATCGATAAAGAA
ACTGGTATGAAGATTTTTTAAATTAACGCCGGACTAATTACAGAAATTCA
AAACACAATTGCAATGTTGCTTTTGTCACTTAAATCTTTTAGTCTTCAAC
TTCAACTTTTCAATCAGATTTTCTTCTCCATTTCGGATACCTGATTATTT
TCTTATGACCTTCTTCTTAACTCTTATCAGGTGCTTTACTTCGAGGACCA
GACGGTTTGGCCATTCCATGTGGGCCAGGAGAGGTAGGGGAACTAGTGGG
TAAAGTAAAAACAGACGCCATACATCAATTCGATGGATATGTTAACCAAA
CCGCCACTAAGAAAAAGATCGCGTACGACGTCTTCAAGAAAGGAGATTCA
GCTTTCATGACCGGAGATGTTTTGTACCAAGATGAATTGGGATATTATTT
CTTCCAGGATCGTATGGGAGATACCTTTAGGTTAGTAGCACTCTTCTCTT
TTACACTAAAGATCATGTACCTAGCAACCTCTTTATTTATCTTTATCTAC
ATTGAATCAACTATTAACAAGTCGACTTTAAGCCGAAAATTTCGCCTATT
ATGTGAAAAATAAGTTGAAGTTAAGTTAAGGTTCATAAAAATGCGAATCG
CTTTAATAACGATACAATCCGTTGAAAATGATAAAAAATTAAGAGCTTTG
GTATTTTGACTATATACTTGTATTCTTTTTATTAGAACGATGAGGCTTTA
AATTGCCAATTTCACCCTAATAATAACATGATCAGAACAATTTGAGGCTC
AAAGTGCCAAAAAAATGAGAACAGCCGAGCCTCATCAAAAACTTACTGGT
TCTTATAAAAAAAGCGTATTATAATTAGGATAAGAAGAAGAAAAATTTTA
CAATCAATATCCATTAGGTTTGTTTCAATTCAATCTTATGTTAACTTTCA
ACATGCGCGTTATCTTTTAACAGATGGAAAGGAGAGAACGTGTCCACCAA
TGAAGTTGAAGGAGTGATCAGTAAAGCATTGGAATTGAGCGATGTTTGCG
TTTACGGTGTCGACGTTGATGGTGTGGAAGGAAAAGCTGGTATGGTCATC
ATGTCCGACCCTGAACGAAAGGTAAGATACATTGAGTCTGCTTTCTCCCA
TCTGATTCTGGCTAGTCCAAGTTTTATCAGAGAAAATCGTAAAAAATTCG
AAAAAAAACAAGGTGTAAAAGAAAAGAGCTTTATGCGTTGCTATAAAGTT
TTGGAAAAATAACAAAATTACTTTCTAAAGTATTAAAGTATTAAAACATT
TTTCCAAAGATAGAAGAAAAAGCAGTGAAAGTGAGATTAATTTTAGATGA
TCGTTAACGAGGTGTAATAAAAAACCCTTTTTTCCACAAAATAAGAGCTC
ATAAAATACCATTATTCAGATGATAAGGGATGAGCTATACCAGAATCAAA
GATAGATTTCACTATCGCCCCCTTTTATGTTTCAGGTCAAGATCGAAGAT
GTGTACCGCCTTATAAGTCGTTCATTACCTGCTTACGCATGCCCCATTTT
CCTTCGTATCACGACTGGCGACCTGGAGAAAACGTCAACGTACAAATACA
AGAAAGTGAAATTACGCGAGCAATTTTATGATCCCTCGTTGTGTGGAAGC
GATGAATTGTTTTATTTCAATGGAAAGGAAAAGACATTCTTACCCATCAC
TTCCGATGCTTTTGCCCAAATTAAAAATCGGGAAATTCGATTTTAGGTCT
TTTTTTATCCGCGATAGTTTTTTTACATGTTGTGCAGTAAAGGGATTTTT
TTATCAATTGCATTTTTGTTAACCTTTGTTATATTTTTTTGTATTTAGTA
TTTTATATCACCATGTTAATCCTGGAAAATTCATGAATATCACCGTTAAC
TCAAGTTTTGGTTTGAAATACTGTTAATTAAAAAATGTAGTAAATGACCA
GTTTGCAATGATTATTTAATTCTTTTGAAAGTGGAACATACACAATCGGT
GATATTCAAGGATTAAAATTTTTTTTTTGAATACATCTTTTCGACCGTAG
CCGCCGGTTGCCGCGCGGGCATTTTTTTGTCCACCCTAAAACCGTCCCAG
TCTTTTTTCGCACCTATAGACAAAAGAAAAATAGACGGGGATGGTTTTAG
GGTGGTAAAACGGACCAAAAATGCCTGCGCGGCAATTGCCGGCTACGCTC
GAAAAGGTATATTTTATAATGGGAAAAATATAAATGAAAATATAAAGATC
CAGCATGAATTAATTGAAGTCTGTCTCACAANTCCACAAAATAAGAGCCC
ATAAAATACCATTATTCAGATAATAAGGGATGGGCTATACCAGAATCAAA
GATAGATTTCACTATCGCCCCCTTTTATGTTTCAGGTCAAGATCGAAGAT
GTGTACCGCCTTATAAGTCGTTCATTACCTGCTTACGCATGCCCCATTTT
CCTTCGTATCACGACTGGCGACCTGGAGAAAACGTCAACGTACAAATACA
AGAAAGTGAAATTACGCGAGCAATTTTATGATCCCTCGTTGTGTGGAAGC
GATGAATTGTTTTATTTCAATGGAAAGGAAAAGACATTCTTACCCATCAC
TTCCGATGCTTTTGCCCAAATTAAAAATCGGGAAATTCGATTTTAGGTCT
TTTTTTATCCGCGATAGTTTTTTTACATGTTGTGCAGTAAAGGGATTTTT
TTATCAATTGCATTTTTGTTAACCTTTGTTATATTTTTTTGTATTTAGTA
TTTTATATCACCATGTTAATCCTGGAAAATTCATGAATATCACCGTTAAC
TCAAGTTTTGGTTTGAAATACTGTTAATTAAAAAATGTAGTAAATGACCA
GTTTGCAATGATTATTTGATTCTTTTGAAAGTGGAACATACACAATCGGT
GATATTCAAGGATTAAAATTTTTTTTTTGAATACATCTTTTCGACCGTAG
CCGCCGGTTGCCGCGCGGGCATTTTTTTGTCCACCCTAAAACCGTCCCAG
TCTTTTTTCGCACCTATAGACAAAAGAAAAATAGACGGGGATGGTTTTAG
GGTGGTAAAACGGACCAAAAATGCCTGCGCGGCAATTGGCGGCTACGCTC
GAAAAGGTATATTTTATAATGGGAAAAATATAAATGAAAATATAAAGATC
CAGCATGAATTAATTGAAGTCTGTCTCACAATAATTTACAGCAGAGAGAA
AGGATAGGGTATTTAATTTGCATCGGTGGTTTACGGTGGTAAAAAAATTT
ATTAATAAGCAAAAAAAAGCAATCTGTAAATAAAAGCCCTAAAATAGCAC
AACTTTGAAAAAAAAAATTAAATGAATCGACTTTTTCGTAATGTATAACC
ATGAAGATAATAAAAAGAGACGTCAACGCCTTTTATTCTATTCTGTCTTA
AATGTACTAACACACTTTGTAATACCTGACACAATTTGTATTACACCTTG
ACGCACTTTGCAATAATTGATCAGTCATACTTTGTAATAAAAATCAACGC
AGTTTGTAATACGAAAAACTGACACACTTTGTAATAAAACATACATTCAA
ATCAGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048922-exon-scaffold_148-1575043694:205807..205915 | TCONS_00048922-exon-scaffold_148-1575043694:205807..205915 | Clytia hemisphaerica | exon |
| TCONS_00048922-exon-scaffold_148-1575043694:198762..200104 | TCONS_00048922-exon-scaffold_148-1575043694:198762..200104 | Clytia hemisphaerica | exon |
| TCONS_00048922-exon-scaffold_148-1575043694:198336..198585 | TCONS_00048922-exon-scaffold_148-1575043694:198336..198585 | Clytia hemisphaerica | exon |
| TCONS_00048922-exon-scaffold_148-1575043694:197695..197842 | TCONS_00048922-exon-scaffold_148-1575043694:197695..197842 | Clytia hemisphaerica | exon |
| TCONS_00048922-exon-scaffold_148-1575043694:195259..196430 | TCONS_00048922-exon-scaffold_148-1575043694:195259..196430 | Clytia hemisphaerica | exon |
| TCONS_00048922-exon-scaffold_148-1510915933:205807..205915 | TCONS_00048922-exon-scaffold_148-1510915933:205807..205915 | Clytia hemisphaerica | exon |
| TCONS_00048922-exon-scaffold_148-1510915933:198762..200104 | TCONS_00048922-exon-scaffold_148-1510915933:198762..200104 | Clytia hemisphaerica | exon |
| TCONS_00048922-exon-scaffold_148-1510915933:198336..198585 | TCONS_00048922-exon-scaffold_148-1510915933:198336..198585 | Clytia hemisphaerica | exon |
| TCONS_00048922-exon-scaffold_148-1510915933:197695..197842 | TCONS_00048922-exon-scaffold_148-1510915933:197695..197842 | Clytia hemisphaerica | exon |
| TCONS_00048922-exon-scaffold_148-1510915933:195259..196430 | TCONS_00048922-exon-scaffold_148-1510915933:195259..196430 | Clytia hemisphaerica | exon |
| TCONS_00048922-exon-scaffold_148-1491911889:205807..205915 | TCONS_00048922-exon-scaffold_148-1491911889:205807..205915 | Clytia hemisphaerica | exon |
| TCONS_00048922-exon-scaffold_148-1491911889:198762..200104 | TCONS_00048922-exon-scaffold_148-1491911889:198762..200104 | Clytia hemisphaerica | exon |
| TCONS_00048922-exon-scaffold_148-1491911889:198336..198585 | TCONS_00048922-exon-scaffold_148-1491911889:198336..198585 | Clytia hemisphaerica | exon |
| TCONS_00048922-exon-scaffold_148-1491911889:197695..197842 | TCONS_00048922-exon-scaffold_148-1491911889:197695..197842 | Clytia hemisphaerica | exon |
| TCONS_00048922-exon-scaffold_148-1491911889:195259..196430 | TCONS_00048922-exon-scaffold_148-1491911889:195259..196430 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_148 | supercontig | scaffold_148:195259..205915 - |
Blast
BLAST of TCONS_00048922 vs. Swiss-Prot (Human)
Match: S27A4 (Long-chain fatty acid transport protein 4 OS=Homo sapiens GN=SLC27A4 PE=1 SV=1) HSP 1 Score: 540.806 bits (1392), Expect = 2.195e-179 Identity = 275/640 (42.97%), Postives = 418/640 (65.31%), Query Frame = 3
Query: 195 ASCLAAAAIGQKYFDLPWLTALAGGAAAYILTGGWKWVRLFYLTIGRDLQLGKVFIGVEMFIRNLSKKNMVVADVFSETAKKFPNKPAFVSVDTGASMTYQEAEEFSNKIANIFQEAGYKKGDVVALLMENCIEYIPIWIGLTRIGVTVSLLNYNVKGEGLKHCITVADCKAVIYSPTLEGSLKDIESSLGNMKYYMFADSAGEL----DRAQSLKKLMNSASSYAPSRHAPLSITDKMLFIYTSGTTGLPKAAVIRGTRFTFMSYAVAHAIGAKADDVLYNTLPLYHSNGGIGLAGQILYTGSTLVIRKKFSASRFFEDCYKHDATIVNYIGETCRYLLSTPPGEFDRKHKVRIATGNGLRPSIWDDFKDRFNIGMIAEFYGATEGNANMINNTGKSGAVGYNSVLFPFVYPIKIVRIDKETGALLRGPDGLAIPCGPGEVGELVGK-VKTDAIHQFDGYVNQTATKKKIAYDVFKKGDSAFMTGDVLYQDELGYYFFQDRMGDTFRWKGENVSTNEVEGVISKALELSXXXXXXXXXXXXXXKAGMVIMSDPERKVKIEDVYRLISRSLPAYACPIFLRITTGDLEKTSTYKYKKVKLREQFYDPSLCGSDELFYFNGKEKTFLPITSDAFAQIKNRE 2099
AS + + LPW Y+ +GGW+++R+F TI RD+ G V + V+ +R ++ V +F+ T ++ P+K A + T T+++ +E+S+ +AN Q G GDV A+ MEN E++ +W+G+ ++GV +L+N N++ + L HC+T + +A+++ + ++ ++ +SL + +F + E + L L+ A + PS TDK+ +IYTSGTTGLPKAA++ +R+ M+ V + + +D++Y+ LPLYHS G I GQ L G T+VIRKKFSASRF++DC K++ TIV YIGE CRYLL+ PP E + +H+VR+A GNGLR SIW +F RF+I +AEFYGATE N ++ N + GA G+NS + FVYPI++VR++++T L+RGPDG+ IPC PGE G+LVG+ ++ D + +FDGY+NQ A KKIA DVFKKGD A++TGDVL DELGY +F+DR GDTFRWKGENVST EVEG +S+ L+++DV VYGV+V G EG+AGM ++ P +E +++ + LP YA PIFLR+ +L KT TYK++K +LR++ +DP++ D LFY + ++ ++P+ +A+++I+ E
Sbjct: 5 ASLVGVLLFSKLVLKLPWTQVGFSLLFLYLGSGGWRFIRVFIKTIRRDIFGGLVLLKVKAKVRQCLQERRTVPILFASTVRRHPDKTALIFEGTDTHWTFRQLDEYSSSVANFLQARGLASGDVAAIFMENRNEFVGLWLGMAKLGVEAALINTNLRRDALLHCLTTSRARALVFGSEMASAICEVHASL-DPSLSLFCSGSWEPGAVPPSTEHLDPLLKDAPKHLPS-CPDKGFTDKLFYIYTSGTTGLPKAAIVVHSRYYRMAALVYYGFRMRPNDIVYDCLPLYHSAGNIVGIGQCLLHGMTVVIRKKFSASRFWDDCIKYNCTIVQYIGELCRYLLNQPPREAENQHQVRMALGNGLRQSIWTNFSSRFHIPQVAEFYGATECNCSLGNFDSQVGACGFNSRILSFVYPIRLVRVNEDTMELIRGPDGVCIPCQPGEPGQLVGRIIQKDPLRRFDGYLNQGANNKKIAKDVFKKGDQAYLTGDVLVMDELGYLYFRDRTGDTFRWKGENVSTTEVEGTLSRLLDMADVAVYGVEVPGTEGRAGMAAVASPTGNCDLERFAQVLEKELPLYARPIFLRLLP-ELHKTGTYKFQKTELRKEGFDPAIV-KDPLFYLDAQKGRYVPLDQEAYSRIQAGE 640
The following BLAST results are available for this feature:
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