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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046995 ID=TCONS_00046995|Name=TCONS_00046995|organism=Clytia hemisphaerica|type=transcript|length=1468bp
AACGGGTTGAAAGTATTAGAAACAGTATTGATATTGACAGTTTGAAATTG
GTGCCATCTAAACTTAATCCAGCAGATATAGGGACTCGCGATTATAGCCC
CTCAACTTTGATTAACTCTGAACTTTGGTTTCACGGCCCAGATTTTCTTA
AGCTGAATGACGAATACTGGCCTAATCTCAGGTGTGGTGACAAGTTTTCT
GATTATAAGCCCGGGAGCTGTCCTCCTGACGGGCCACCTGATGATTTATT
TGCTGATTTAAAGCCCGAGGCTGAGACTAACTCTACCTGTCTCAGTTCTC
CTAGGCACCCTGTTACTGAAAAGTTATTAGTTAcacaaattcaagaaaaa
gaagANATGATTTATTTGCTGATTTAAAGCCCGAGGCTGAGACTAACTCT
ACCTGTCTCAGTTCTCCTAGGCACCCTGTTACTGAAAAGTTATTAGTTAc
acaaattcaagaaaaagaagaaaaagaagatttaGTTTCAACGAGTACCA
TCGGTGCTTCAATCCAAACAGAGAGGTTCTCCTCTCTGTCCAAGTTGGTC
CGCGTGACCGCTTGGGTCCTTAGATATATAAGGAAACTAAGAACAAAAGC
AAGAAATAAGaaacaaaaagtaaataatacaaataaaacaaaaatcaatG
GTGGTATCAATGGTATCAATGGTGGTATCAATGGCATCAATGGTGGTATC
ACTGGAGAAGAAATGTTGGAAGCCAAGCTGTTATGGTTGAAAGATGCACA
AAGCTCCTTACAAAGCAAAAAGAACTTTACAAATTTACAGAGAcagttga
atttatttttacctCTATTCGGACGAGGTTAATGAAATTCTAACACCCAA
CAAACTGTTTTACGGTAGAAACATTGTGAATGAAGTGCAATTACTAGATT
CAGAAACCAAAAATCTCGAACCTTCCGAACAGTTATCACGGGTTCGAGAA
CTTGTTGATCAATTTTGGACTTTATGGCAAAACGAATACCTTCTTGAACT
ACTAGAACATCAAAGACGTAAAAAGTCGAACAGTAGTTTACACGCAATCA
AAGGCGATGTAGTATTGATTAAAGATGAACGATTGAAACGTAGTCAATGG
AGACTCGGTCGAGTTAAGAAACTTATTCACAGtaaagactttaaaattcg
TGCTGCAGAAGTAAACGTTATTACCAACGGTAAACTACAAACTTTGAAAA
GACCGGTAAGTAAACTCTATCCGGTAGAATTTGAAGAACAAAGAGACCAA
AAGGACAAAAGCCAAATCGAATTCACAAGTGACGAAGACACAATCACTTT
CCTTTCTTTTGGGGGAGTGTGAAGAACAAAGATGAGTTATATAACTATAA
ATAGTCACGGTTCACGTGATTAGCACGTGACCCgctcttttattttttac
aatcctcttttgtatttatatttTAGTTGCTCGGAAAGACTCATAAAGAC
CTATACTATCTCAAATTA Run BLAST on NCBI transcript from alignment at scaffold_119:101387..102854 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046995 ID=TCONS_00046995|Name=TCONS_00046995|organism=Clytia hemisphaerica|type=transcript|length=1468bp|location=Sequence derived from alignment at scaffold_119:101387..102854 (Clytia hemisphaerica)
TAATTTGAGATAGTATAGGTCTTTATGAGTCTTTCCGAGCAACTAaaata
taaatacaaaagaggattgtaaaaaataaaagagcGGGTCACGTGCTAAT
CACGTGAACCGTGACTATTTATAGTTATATAACTCATCTTTGTTCTTCAC
ACTCCCCCAAAAGAAAGGAAAGTGATTGTGTCTTCGTCACTTGTGAATTC
GATTTGGCTTTTGTCCTTTTGGTCTCTTTGTTCTTCAAATTCTACCGGAT
AGAGTTTACTTACCGGTCTTTTCAAAGTTTGTAGTTTACCGTTGGTAATA
ACGTTTACTTCTGCAGCAcgaattttaaagtctttaCTGTGAATAAGTTT
CTTAACTCGACCGAGTCTCCATTGACTACGTTTCAATCGTTCATCTTTAA
TCAATACTACATCGCCTTTGATTGCGTGTAAACTACTGTTCGACTTTTTA
CGTCTTTGATGTTCTAGTAGTTCAAGAAGGTATTCGTTTTGCCATAAAGT
CCAAAATTGATCAACAAGTTCTCGAACCCGTGATAACTGTTCGGAAGGTT
CGAGATTTTTGGTTTCTGAATCTAGTAATTGCACTTCATTCACAATGTTT
CTACCGTAAAACAGTTTGTTGGGTGTTAGAATTTCATTAACCTCGTCCGA
ATAGaggtaaaaataaattcaactgTCTCTGTAAATTTGTAAAGTTCTTT
TTGCTTTGTAAGGAGCTTTGTGCATCTTTCAACCATAACAGCTTGGCTTC
CAACATTTCTTCTCCAGTGATACCACCATTGATGCCATTGATACCACCAT
TGATACCATTGATACCACCattgatttttgttttatttgtattatttact
ttttgtttCTTATTTCTTGCTTTTGTTCTTAGTTTCCTTATATATCTAAG
GACCCAAGCGGTCACGCGGACCAACTTGGACAGAGAGGAGAACCTCTCTG
TTTGGATTGAAGCACCGATGGTACTCGTTGAAACtaaatcttctttttct
tctttttcttgaatttgtgTAACTAATAACTTTTCAGTAACAGGGTGCCT
AGGAGAACTGAGACAGGTAGAGTTAGTCTCAGCCTCGGGCTTTAAATCAG
CAAATAAATCATNTcttctttttcttgaatttgtgTAACTAATAACTTTT
CAGTAACAGGGTGCCTAGGAGAACTGAGACAGGTAGAGTTAGTCTCAGCC
TCGGGCTTTAAATCAGCAAATAAATCATCAGGTGGCCCGTCAGGAGGACA
GCTCCCGGGCTTATAATCAGAAAACTTGTCACCACACCTGAGATTAGGCC
AGTATTCGTCATTCAGCTTAAGAAAATCTGGGCCGTGAAACCAAAGTTCA
GAGTTAATCAAAGTTGAGGGGCTATAATCGCGAGTCCCTATATCTGCTGG
ATTAAGTTTAGATGGCACCAATTTCAAACTGTCAATATCAATACTGTTTC
TAATACTTTCAACCCGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046995-exon-scaffold_119-1491911889:101387..102854 | TCONS_00046995-exon-scaffold_119-1491911889:101387..102854 | Clytia hemisphaerica | exon |
| TCONS_00046995-exon-scaffold_119-1510915933:101387..102854 | TCONS_00046995-exon-scaffold_119-1510915933:101387..102854 | Clytia hemisphaerica | exon |
| TCONS_00046995-exon-scaffold_119-1575043694:101387..102854 | TCONS_00046995-exon-scaffold_119-1575043694:101387..102854 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_119 | supercontig | scaffold_119:101387..102854 . |
Blast
The following BLAST results are available for this feature:
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