|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046994 ID=TCONS_00046994|Name=TCONS_00046994|organism=Clytia hemisphaerica|type=transcript|length=923bp
TCTGTCTATATTTTGACCACGACAAATATTTCCCAATAAATCCCTCGAGA
ACCGTTCAAAATTGTTCAATGAGAAATGTAAAGCGATATTAATTCGGGGC
ACTGCAATTTCTCTTCCAGAGAGCAACAGGATCAAATACAAAATCAGAAA
GCGACCATCAAAAAGCAAGCCAAAATCATAGGTATGTAAAATTTGGTGTT
AGATCTGTTTACTAAACCTGTTTTCTATTTGATGCGATGGGACATTCCGA
TTGCTAAGGAGTTTTATCAAATTCTCAGAAACACTCATCTTTTTACgaca
aaatttgagcttttagacCCTCTCATGATAAGGTCCAAAGTCTAAAGTTG
AGTTCTCAAACTCAAACTTACACTCTACATTCGCACCTCAAGTTACAAGG
CTTTCAAATCAATTGTAGTTTTAAAGTCTTCCTTGGAATCTTCCTTTTTC
ACTTATTTTATGAAGATGAtcttcttttgaagatttcactTTCATGATTT
TGACTTTTACTACGAAGGTGGAGCCAATGAATTTCTCCTAATTACTACCA
TTTtactttaaatgaaaaatttattacaaCGAGAAATACACAATCAAATC
GatcaaaaatcttattcaaaattctattttttagCCTGAAAACACAGCCC
CAATCCTCGAGGAGGCGGAAAATGAAGAACTCGGAGAGCAGATTGATCAA
GCAATCATTGATCTTCAAATTGAGAATGATAAACAACACGAACAAGAAGA
AGTAGAAAAAAAGATGgcagaagaagaaattgaaaaagaagttgTTGTGG
CAGAAGTTATGGCTCTTTCCACACCACCACCTGCTCCTCTCTCCCAACGT
GGTTTCAACTTGGACTTGAACTTGCCGTccaagtgattcttatagataaa
gataaattttttgagccaacaat Run BLAST on NCBI transcript from alignment at scaffold_119:71484..72406 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046994 ID=TCONS_00046994|Name=TCONS_00046994|organism=Clytia hemisphaerica|type=transcript|length=923bp|location=Sequence derived from alignment at scaffold_119:71484..72406 (Clytia hemisphaerica)
attgttggctcaaaaaatttatctttatctataagaatcacttggACGGC
AAGTTCAAGTCCAAGTTGAAACCACGTTGGGAGAGAGGAGCAGGTGGTGG
TGTGGAAAGAGCCATAACTTCTGCCACAAcaacttctttttcaatttctt
cttctgcCATCTTTTTTTCTACTTCTTCTTGTTCGTGTTGTTTATCATTC
TCAATTTGAAGATCAATGATTGCTTGATCAATCTGCTCTCCGAGTTCTTC
ATTTTCCGCCTCCTCGAGGATTGGGGCTGTGTTTTCAGGctaaaaaatag
aattttgaataagatttttgatCGATTTGATTGTGTATTTCTCGttgtaa
taaatttttcatttaaagtaAAATGGTAGTAATTAGGAGAAATTCATTGG
CTCCACCTTCGTAGTAAAAGTCAAAATCATGAAagtgaaatcttcaaaag
aagaTCATCTTCATAAAATAAGTGAAAAAGGAAGATTCCAAGGAAGACTT
TAAAACTACAATTGATTTGAAAGCCTTGTAACTTGAGGTGCGAATGTAGA
GTGTAAGTTTGAGTTTGAGAACTCAACTTTAGACTTTGGACCTTATCATG
AGAGGgtctaaaagctcaaattttgtcGTAAAAAGATGAGTGTTTCTGAG
AATTTGATAAAACTCCTTAGCAATCGGAATGTCCCATCGCATCAAATAGA
AAACAGGTTTAGTAAACAGATCTAACACCAAATTTTACATACCTATGATT
TTGGCTTGCTTTTTGATGGTCGCTTTCTGATTTTGTATTTGATCCTGTTG
CTCTCTGGAAGAGAAATTGCAGTGCCCCGAATTAATATCGCTTTACATTT
CTCATTGAACAATTTTGAACGGTTCTCGAGGGATTTATTGGGAAATATTT
GTCGTGGTCAAAATATAGACAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046994-exon-scaffold_119-1491911889:71484..72406 | TCONS_00046994-exon-scaffold_119-1491911889:71484..72406 | Clytia hemisphaerica | exon |
| TCONS_00046994-exon-scaffold_119-1510915933:71484..72406 | TCONS_00046994-exon-scaffold_119-1510915933:71484..72406 | Clytia hemisphaerica | exon |
| TCONS_00046994-exon-scaffold_119-1575043694:71484..72406 | TCONS_00046994-exon-scaffold_119-1575043694:71484..72406 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_119 | supercontig | scaffold_119:71484..72406 . |
Blast
The following BLAST results are available for this feature:
|
