TCONS_00046359 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046359
Unique NameTCONS_00046359
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1426

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046359 ID=TCONS_00046359|Name=TCONS_00046359|organism=Clytia hemisphaerica|type=transcript|length=1426bp
ttgaaaatctttttcatttttgggtgTGTATATGTGTGTGTTATGGCTTG
CCTTTTGTTGACGAACTACCCACCGGAGCTCCTGCGATTATTTAACAAGA
ACGACCGCGGAACATCAGTCCGTAAGAAGTTATTGTGTGCTCCTACCAAA
TCACAACACCAACGACTGCCCAATTATCCAAAAGAGCCTGAACTCAACAA
AACACTCGACATGAGTAACATCGTACCACCTTTACCATCAGAACCGAACT
CCCCGATGAGTACGCTGCAACGAACCCCCCGAACACCCCGAATGATGAAC
GGTAGCAACAGTCAGTATTCCACCTTACAACGTGGTATGTCAGGGGGTCA
ACAAAGCCAATTCTCCACCCTACAACGCAATAGAAAAACGTCAGATGGGC
AATACAGTGGACCCCCGTCTCCAATGTCCAACATGCCAAGGAATGACGAC
GAACACGCCCTTATTGTTATGTACGCACAAAAACTGGCAACTGCACGAAA
CGAACAGGAAGCGAACTTGCGGAACAAAAAGCTTTCCACTTCTTCCGAAC
CTTCCAACCAACAAAAAGAAATCTTGACCAACCTCGAAGAAAAAAACAGA
TCTCTCTTGAATGAAATTCGCAAGTTGAAGCAGGAGCATGAAGAAGCCGT
TAAAAATGCTCAACAAATGGGTTGTGATCCTAACCTGTTAACAGAACTCC
GCGTTCTCCGTCAACGCAAAGACGAATTAGAGATGCGAATGTCCGCGCTA
CAAGAAACGCGGAGAGAATTGATGGTACAATTAGAAGGACTCATGAAACT
CCTCAAGAATTCAGAAAATGGTACTATAACTGTCCTCCCCATTCAACCTG
AAGCTTAAACGTATTGCTACCGAACGGCACGGAAAGCGTACACTCGAAGG
AGGACGCTCGTCAAAGACGAAAGACGATAGTAAAGAAAGCAAGATTTTAA
AAAGCATTAACTTTGATTAATTCCATCATTAAATAATAAACTACAAAAGG
AACCTTAGCCGCGCGTGCTAACTTCTAAAGAATGTAGAATAGTTTGAAAT
GAACTTAGAAATTAGCGATGGAGAGTTTGGCCTCCGTCTACACAGTATCG
CGTAACAAATGTCGTTCTTGATGCATCACCGAAATAGAGAACGAACTTTG
TAGATAATGGTATGGAATCGCATGAGTAGCAATGTGCAATGAAGGAATCA
AGTATTAACATGGAATTTATTCCAGTGTCTTCCAACATACAAATTTATAA
CCTGGTataactcttttcaaaaaagcaagatttttttctcggaATAGAAT
TTGTATGGTTACAGTATTAGTTCTGAACGAGGGTTATTTTGAAGTCCTCG
TATTTATAATACCCATTtctcaatagacgatatcggcttaacgtgaaaac
tcagatttgacccccgagaattcccc
Run BLAST on NCBI

transcript from alignment at scaffold_109:102253..113783+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046359 ID=TCONS_00046359|Name=TCONS_00046359|organism=Clytia hemisphaerica|type=transcript|length=11531bp|location=Sequence derived from alignment at scaffold_109:102253..113783+ (Clytia hemisphaerica)
ttgaaaatctttttcatttttgggtgTGTATATGTGTGTGTTATGGCTTG
CCTTTTGTTGACGAACTACCCACCGGAGCTCCTGCGATTATTTGTAagtg
ttttgaatttttaaccaGAGAACGTTACacatctttttataagaacatcc
aagatttagaagccttcggatgttcttaactttttgaatgagTTTTAAAC
CTGAAAGTGTCCttaagatattcttaattttgcaattttatgagtatttt
tgcgcaatttcctaagaaatgggATGTTTCAGATCccttgaagccttaaa
atgttcttaacttgttcttaatattttggcaatcaaagccttgtgttctt
atgtagtttgtgTATAACGAATGGACCCCTTTTTCAAAGAGGTAGATTCA
CTTCCCAAAATGCAACGATCTTTAAgtttcatttcaaattcaattcgGTA
AAAATAAACGTTTCTAAATactgaatatttttatatatgaaaTCATATAT
TTGCGCTGTCTCccaaacgatgaaaatttaGAGCAGATTTTTACAACAGC
CTCTTTTcaggatttttgattgaaaaattggGTGGAGTTGAATCAAATAT
TAATTTTAGGTCAACTTTtcattttgtatattttatccTACTTTTCATAT
AGTGttacgaaaatatttttatttctgatTCCCTTCTCActcaagaaaaa
ctttcaagtttGTCGAAGTTTGTAAAACTTTACGAATTCTGCGGTAAATG
GTTACACGACTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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ttttttaatgtttaatctttaaagcattaaagctttataagtgcatgaca
tgatctttatgtgggggcatttagtgaaagctatgactagtttaatGAAA
ATGTAGTCTATTGGAATATTCAAGATATAAAACTGATTTTCTAATTAAAA
ATTAGAACTATCGAATAACTAATTAAGCTAAAATATACCTAGTATTTCTC
ATTTTCTCATTCAATAACTCAAAATCGTCTCTAATTTATCATCTAAGAGG
AGGAGAAAGTGCTGACATCGCAAcattaaaaaagaacgacaaattccATC
ACTACATATTATCATCCCTCTTTGTGTTTTGCGTATAATAAcgactacct
tatcggggaaaaaaatgtcagagttttatttagtcggggttttttttcgt
cgggggggaatttcgtcacccctcaaaattttcgtcactttcccccgtgt
tttggaaatgaaacaGTAGATGCGAAGTAGACACTTTCTCTATGTGCTAA
TTCTCGTTAATTAGAAAAACTTACACTTCCTCTTAATTTTCTTTGAGGAA
GAACGTTGTATTGTTTTTTAGCTTTCACTGCCGTAACTCTACTTTTCTCC
TTCTCTCACCTTGATACTTACGTAACCCTAATACCCACCCTTTTTGAGTA
AGAGGTGAGTGATTTATTTGTAAGCATAACCTTTATAAGCACAGTATTCG
AAAGTTCAATCTCAGTAACGAATACActcactttttcttttataagaaca
acgaggctcaaaattgctaaaagataagaacaatttaagaacaatgctga
gcctggaatAACTCAATTCCAAGCAATTCAGGGGTCAAAGTAGTGAAAAT
TTGgtataaagcctaaaatacAATCACCCAAGAACAAATCAGGATAAAAC
AATGTGAGAATCAAAgtaccaaaaaataagaacaaccgaGCCTCAACAAG
AatctactggttcttataaaaaagcgtgtacacaCGCAGAGAGGTTTAAA
TACTTTCCTTCAAAAAAAACCACACCCTTGTTAATGCCGTCAAAGCGAAG
GagtacatttttttattagaacaaaatatataagaataTGAGGCTTCGAT
AGCTAAAATAattagaacaagttaagaacattttaagaatattttaaggc
tttacggcTCTGGAAcaaccaatttcttaggaaatgtcacaaattctcgc
aaaattgtgaaatttagaacatttttaagaaactctttaggcttaaaact
caaaaagataagaacatccgaaggctataaatattttggatgttcttata
aaaaaattgtacgACATTGTACGTTGGGAAAGATATTGCCACTACCTTTT
TCGTTGCAGGTGTATTTTCAAAGCTTTCCTTTTGTCTTTTTATTCTTCCT
TCCTTTCAGCGACAATATTTCTtccatatttatctttatttttcattcgt
aaaaattttctttttcttttcttacatgttattttttctttaaatattaC
AGTCGatgaaaaataaactatatCATACGggtgaaatgaaaatgaaaaat
attgacatctctttctttccttttttttgacGAATCTTTACTTTTAGTCA
ACTTTCCACATCAGGGGAGAATACATTATTcgaacgtcataaatgatttT
TCAATGACACTGGCTACTTGGGAGACGAGaaattgattgttttgatttca
ctAACTGTAGCTTACCGGGATTATTTTTAGTAGAAAGATTTTCGTAACAT
TTACAATCATATCATTTTTCAATCAAAGGAAGAGACTGAGACTGATAATT
TAGTACTTAAAAGTTATGAAACCTCTGACTGGctttcttttatctttttc
tctgattttgatcttcttcttcagaTAAAGTTTTGTGAGAAAAGGACCAT
GAAATGAAACTGATAAAAATTCgttcttcaattttttctctACTTCACTT
ACCTCTCAACAACTTGTTCTGTTAAACGTAATAATATGATCAGGGAAGAG
CGCACACCAACTTGTAATTTCTTTTGCCGTTCGAAAAAGGTGAGATCAAA
CGGGACTCAACGATATCTATCGGACAGGGTGAACCAGTACTTTTTTATGT
gatgtgtattttttaattgtCGTTAATTTGAAGCTTTAGTTAATGGATCC
ACTCTTCGTCTACCGGTTACAAAGGTGTTCATTACAAAAATGATTGGTCt
gtgaatttccatgaagtatTTGACTAGACATTTTTCCGTTCTTCATTATA
CAATTGAAACAGATTACGAAATGACGCCCTATAATGAGCGCTATCCGGAT
ATACGAGTTGACACTTTGATGACCGAAACTttagagtcgatatttttagT
TGGATAGCCTGGTATTCTAGGACTTTTCGACGATTTTTTTTCACGGGATC
GACGACCAGCCGGCCCGGCTCGGCTTGGGTCGGCTCGGCTATCTTTGAAC
TGAACGACATTTGAAGAAGCGGTGATTCGAACCGCGAATCCCTGGTTTCA
GGTGCTGACGTCTTGATCAATCAGCCATTGCTCTTTAATTAATTATGTTC
TTTTTACTAACATACAAACAAACCCAAAAGGTTCTTACCCTCCAACTACT
ATAACCTTGATTTGTTTCTTCCTTTAGAACAAGAACGACCGCGGAACATC
AGTCCGTAAGAAGTTATTGTGTGCTCCTACCAAATCACAACACCAACGAC
TGCCCAATTATCCAAAAGAGCCTGAACTCAACAAAACACTCGACATGAGT
AACATCGTGTAAGAATTTCCACAGTTTTGACATTAGCTAAATTTCGCTTA
TTATTCTTGGTCATCATTTAATTCACATCGTCATATCTCAAGCTCATCAA
TCAGGTTAGCTCAGGGGTTTTGATTTTGTTCTTCAAGGTAACTGTGTTTG
CTGTCGAAGTGAGTTTACAGCTTGTAGAGTAACCGTCCTGGTAGCTTCAT
TTAGAGGGATTTATCCAGGATATTTTGGTTTGAAAAGTTAGGCAATTTTC
CTCATTCTTTGAATGGAGACCTCTTGATCatataatcagataaaataTTA
TTCTTGTTATGTTTTCTTTTCCTACAGACCACCTTTACCATCAGAACCGA
ACTCCCCGATGAGTACGCTGCAACGAACCCCCCGAACACCCCGAATGATG
AACGGTAGCAACAGTCAGTATTCCACCTTACAACGTGGTATGTCAGGGGG
TCAACAAAGCCAATTCTCCACCCTACAACGCAATAGAAAAACGTCAGATG
GGCAATACAGTGGACCCCCGTCTCCAATGTCCAACATGCCAAGGTAACCT
ACTGTTTCCAACAAAAAGGGTAGTGAAGGATCAATAGATTGCTGATGGAC
CATAATTtcgtgagtgagtgagtgagtgagtgagcaAAAGGTGTGTAAAC
GTCGCTTTGGAAAATTAGCTAGTTCGAAAACAAGGTATGGTACGATTTTG
ATAAACCTCTAGAAAAGTTTATATAGAGTAAAGAAACGCGCATGGATGCA
TGGTTTTACACGTACACTTCCTTACACTTTAGGAATGACGACGAACACGC
CCTTATTGTTATGTACGCACAAAAGTATGTATACATTTTCAATTTCCTCA
TATTTATTGGTAGCATGTCCATCGGTGTATGTAGTACAAATGCACAATAC
TTGATACCTTATACACTAAATTCTCGCTTATCTAAACTTCtaatattcga
atctttctataattagAACTTGCTTCCAGTCCCCGCCAAGGATAAAACCT
CTTAAGAAATTTTATTCCACAAAGAACCTTtaatttaaagctttttctcc
CACTTCTAGACTGGCAACTGCACGAAACGAACAGGTATGTTTTgaacttt
tcaatatttttttctgtgatcttTAAGTTACCATACTCCTGTGTTGATAA
AGTGACCGTAGTGcatagagcatccggctacggcgCACAAGATCGTGGGT
TCAATCACTGACCAGGTCATACCGAATTATTCGTTCTTAGTACAAAGAAA
TGACACTTGATGCCCCTCTACTTGATGCTCAGTAATTAGAGGGTCAAGGT
TAAGTGGAGCAATTCAGGGAGGAAGAGTAGCGCCATCCCCTTTCTTTGAT
TacatagctatcgaaagaggagccttcgggtttTGTTGATGTATAAAATG
GAGCAAAGCAGAACAAATCCTGTCATATACACCTATTAACCCTAACTCGT
AAGAGGGTTGGAATCAAGTCTAATAGGGTCAAGTGACGCCATACGTTTTT
ACGTGTAAGCGCGTCAATCTAATTTAACGTCATTCAACCCTAGTGATGTA
GTGGTGTGGTGGTCATCGCTCTTGACTCCCGTCTGGGAGACCCGAGTTGG
AAGACCCGAGATTCCCACTGTAGTACTACGGTTCGNGTGGTCATCGCTCT
TGACTCCCGTCTGGGAGACccgagttcgattcccactgtAGTACTACGGT
TCGCTTGGCAAATGAACacaccttcgcccgggtcaacccataccatgtga
ggggaattgggtaccactactctgatacaagagtgtgggtgataTGCCGG
GCATTGTGGTGTGTGGTGTCACTCATCCCGTTCCGCGCCTGCGACGAGCT
ATATGCTCTCCCGCGTGGTTCGAGTGTCATCACTATGCATCATGGTATCT
GTGTCTCGCGTGCACAGAACCAACGGTGTCTGGACAGCGCTAAGTGTTCC
AAATCGAAAGAGGAGGAATTCCTACTTTGCAAGGAGTAGGATCCAGTCCC
CAgtggggagggctcatatcatatCATTCAACCCTAGTAAACTAGTACTG
AATCTCCTCCTGTAGGCAGCAGCCTTTTACACAAGAGTTGATAGATTTAT
TTTCGTATTCGACTTTCAGGAAGCGAACTTGCGGAACAAAAAGCTTTCCA
CTTCTTCCGAACCTTCCAACCAACAAAAAGAAATCTTGACCAACCTCGAA
GAAAAAAACAGGTGAAATATATTCCactttttcgttatttttcaaaCATC
TTTGAATACTCCGTTTATGGACTTATTGGCTGGTTATATTtgattgaaac
tttctttttgaCGTCGTATGATCCAGCAATATGATTTGTTAAAACAGATT
TGATGTACACGTTACTTTTTTATCTTAACCAATAGCCCtttgacccaata
agcataagTATCGTATAATATCAAGAGTGGTCAAAgcaaactttcaaaaa
tgagctagaatgcaaATTAACCGCCCAAGGACTGACCCCAAAATAGGAGT
GTCTTATAAAAAGACACACACCTTCCAAATATACCTCCATATGACAGTTC
CTGATACTGAAATTTGTATTCCGTAATTTTGTATCATTTGTgtttatttt
aactaaaataatttttgttcaaCAATACTTAATATTAACCTTTCTCATCC
TCAGATCTCTCTTGAATGAAATTCGCAAGTTGAAGCAGGAGCATGAAGAA
GCCGTTAAAAATGCTCAACAAATGGGTTGTGATCCTAACCTGTTAACAGA
ACTCCGCGTTCTCCGTCAACGCAAAGACGAATTAGAGATGCGAATGTCCG
CGCTACAAGAAACGCGGAGAGAATTGATGGTACAATTAGAAGGACTCATG
AAACTCCTCAAGGTAGGAAATCCTCTTTATTTCATGTTTCATTTCTCCAG
TGGCAAATTGGTATAGAGGTTTTTCAAGTTGAATAAGTTACGTaaattcc
gccattatggaaacaaAGCAACCANGAGGTTTTTCAAGTTTAAGTTACGT
AAATTCCGCTATTATGGAAACAAAGCAACCAATTAGACGTTCGATTTACG
TAAGGAGTCGCCTCtacaaattcgaacgtttgatttccataatggtggat
taccttaagttacgtaactttttcaaattatgaAAAGCAGCTataattct
tgatattcatgacttTATACGGATAGAATTCATGTTATTCATCACTTTAA
CATTTCctaacattacatcacagaCCCACAAGCTGATTGGCTGCCAGTGA
CGTATTGACTCATTTTATAACACACTCAACCAATTAACTGTTGGGTCTAT
AATGTAATATctcagctgacacacaacgttgtttctacGTTCATTTAAca
ttaaatggacgttgtgaatattaAATTGACGttaaaacaatgttgtgtgc
cagctaggaTCAGAAGATATTTCATGAATTGTAGTTATGGTTGAACTACG
ATTGATAACTCGTAACTCTGAACTAACACTGAAAAGTTTAaactaacaaa
atactaaacaTTAACAATTAACCGATCCTAACCTCATCCACCTTAAAAGT
CTTTTGAATGACCAAATGTATACATTACTGATTTATAATGGAAAGATTTG
AAAACTGGTGCAAACCACCTTTTAACCTTCTAACATTCAATGTTTGAAAA
TCTTGCTTTCTGTTAACtaaaaccatgaacatataaacgactggacatcc
atctccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctaacaacgtcaaaac
ttcgacaaaagtctctgttgttctaatcttctcaagtcttttatctatat
cataacaaagataacagaggcaaaattaTCGTCAGTTATCtatcagcttg
tcaaaactccgactaatatttctaaattttgacttaaaagtgtctaataa
ttttagagagtgtcacattctaatttcgatattcttattaaacaggctct
caactttggcaagctatttcttttaagtcataaaaaaaattattggagtg
acaaaagggatagaaaagtatacacgcagttgaaattctgcatttcagag
ttgaaaatgttgatgaaatatattacaaacttgtaaaaaaattcgaaaat
aatttatttgtacattatgagtaatgttcaagctctatcaatctttttac
ctaaaaaaatcaaagaaataaaattatgacggagtattatcggatttttc
ataccaattttgaaatacaggcggcaacgaagctcgtttcaaagagacaa
taaaagatagatgtccagccGTTTATATGTTTATGCCAAAACTTCCTCCA
AATTTCTTTTCTCTCTCTACTCTAAGAAGCCCCGGATATtcaattcacgc
catcacgcaattTATTCTTTTCCAAATTCACGTATTGACGAAATTTTTCT
CGAATAATTTCACGCATTTCTtgttttccaattcacgcatttacgcagct
tttttgaaatgttcacacattcacgcgagtgaaaaaagctttttcatgca
ttcacgcaaaGCGCTGGGGGGCATATAACTTCAATCTCTCCAAACTAAAT
CTCACAACTTACTAACCGTTTACTTACACAATGACGTCACGACTGAAAGA
AACTAATCTTTACTTCAATTTCGAAACATTTTTCTCAATCCATCTTTCCT
CGTTTTTCGTAGAATTCAGAAAATGGTACTATAACTGTCCTCCCCATTCA
ACCTGAAGCTTAAACGTATTGCTACCGAACGGCACGGAAAGCGTACACTC
GAAGGAGGACGCTCGTCAAAGACGAAAGACGATAGTAAAGAAAGCAAGAT
TTTAAAAAGCATTAACTTTGATTAATTCCATCATTAAATAATAAACTACA
AAAGGAACCTTAGCCGCGCGTGCTAACTTCTAAAGAATGTAGAATAGTTT
GAAATGAACTTAGAAATTAGCGATGGAGAGTTTGGCCTCCGTCTACACAG
TATCGCGTAACAAATGTCGTTCTTGATGCATCACCGAAATAGAGAACGAA
CTTTGTAGATAATGGTATGGAATCGCATGAGTAGCAATGTGCAATGAAGG
AATCAAGTATTAACATGGAATTTATTCCAGTGTCTTCCAACATACAAATT
TATAACCTGGTataactcttttcaaaaaagcaagatttttttctcggaAT
AGAATTTGTATGGTTACAGTATTAGTTCTGAACGAGGGTTATTTTGAAGT
CCTCGTATTTATAATACCCATTtctcaatagacgatatcggcttaacgtg
aaaactcagatttgacccccgagaattcccc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029594XLOC_029594Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046359-exon-scaffold_109-1491911889:102253..102345TCONS_00046359-exon-scaffold_109-1491911889:102253..102345Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1510915933:102253..102345TCONS_00046359-exon-scaffold_109-1510915933:102253..102345Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1575043694:102253..102345TCONS_00046359-exon-scaffold_109-1575043694:102253..102345Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1491911889:108180..108310TCONS_00046359-exon-scaffold_109-1491911889:108180..108310Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1510915933:108180..108310TCONS_00046359-exon-scaffold_109-1510915933:108180..108310Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1575043694:108180..108310TCONS_00046359-exon-scaffold_109-1575043694:108180..108310Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1491911889:108630..108845TCONS_00046359-exon-scaffold_109-1491911889:108630..108845Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1510915933:108630..108845TCONS_00046359-exon-scaffold_109-1510915933:108630..108845Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1575043694:108630..108845TCONS_00046359-exon-scaffold_109-1575043694:108630..108845Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1491911889:109085..109126TCONS_00046359-exon-scaffold_109-1491911889:109085..109126Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1510915933:109085..109126TCONS_00046359-exon-scaffold_109-1510915933:109085..109126Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1575043694:109085..109126TCONS_00046359-exon-scaffold_109-1575043694:109085..109126Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1491911889:109362..109386TCONS_00046359-exon-scaffold_109-1491911889:109362..109386Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1510915933:109362..109386TCONS_00046359-exon-scaffold_109-1510915933:109362..109386Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1575043694:109362..109386TCONS_00046359-exon-scaffold_109-1575043694:109362..109386Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1491911889:110422..110513TCONS_00046359-exon-scaffold_109-1491911889:110422..110513Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1510915933:110422..110513TCONS_00046359-exon-scaffold_109-1510915933:110422..110513Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1575043694:110422..110513TCONS_00046359-exon-scaffold_109-1575043694:110422..110513Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1491911889:110957..111164TCONS_00046359-exon-scaffold_109-1491911889:110957..111164Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1510915933:110957..111164TCONS_00046359-exon-scaffold_109-1510915933:110957..111164Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1575043694:110957..111164TCONS_00046359-exon-scaffold_109-1575043694:110957..111164Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1491911889:113165..113783TCONS_00046359-exon-scaffold_109-1491911889:113165..113783Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1510915933:113165..113783TCONS_00046359-exon-scaffold_109-1510915933:113165..113783Clytia hemisphaericaexon
TCONS_00046359-exon-scaffold_109-1575043694:113165..113783TCONS_00046359-exon-scaffold_109-1575043694:113165..113783Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_109supercontigscaffold_109:102253..113783 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.29894	5.05815	5.02695	7.48778	6.07793	0.195173	11.3031	3.42776	2.26105	4.95934	0.653631	5.83734	5.02245	6.76112	0.995083	1.03065	3.91505	7.68484	9.38522	1.5231	15.7042	13.6713	8.3648	5.45701	2.11127	6.07053	3.14954	3.81227	5.56359	11.198
Blast
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BLAST of TCONS_00046359 vs. Swiss-Prot (Human)
Match: DTNB (Dystrobrevin beta OS=Homo sapiens GN=DTNB PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.303e-30
Identity = 97/253 (38.34%), Postives = 134/253 (52.96%), Query Frame = 1 
Query:  115 SVRKKLLCAPTKSQHQRLPNYPKEPELNKTLDMSNIVPPLP-------------SEPNSPMSTLQRTPRTPRMMNGSNSQYSTLQRGMSGGQQSQFSTLQRNRKTSDGQYSGPPSPMSNMPRNDDEHALIVMYAQKLATARNEQEANLRN--KKLSTSSEPSNQQKEILTNLEEKNRSLLNEIRKLKQEHEEAVK----NAQQMGCDPNLLTELRVLRQRKDELEMRMSALQETRRELMVQLEGLMKLLKNSE 816
            ++ K L C PT+      P +P++PE  K LD+++IVPP P             S   +P   LQ +   P  +   ++  +           S  + LQ   +  D      PS      R D+EH LI  YA +LA     +  N+      LS + + + QQ++++  LE KNR +L EI++L+ EHE+A +     AQQ   +P LL ELR+LRQRKDELE RMSALQE+RRELMVQLE LMKLLK  E
Sbjct:  302 AISKSLGCVPTREPPH--PVFPEQPE--KPLDLAHIVPPRPLTNMNDTMVSHMSSGVPTPTKRLQYSQDIPSHLADEHALIA-----------SYVARLQHCARVLDS-----PS------RLDEEHRLIARYAARLAA----EAGNVTRPPTDLSFNFDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQ---NPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEELMKLLKEEE 521
The following BLAST results are available for this feature:
BLAST of TCONS_00046359 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DTNB4.303e-3038.34Dystrobrevin beta OS=Homo sapiens GN=DTNB PE=1 SV=... [more]
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