|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046330 ID=TCONS_00046330|Name=TCONS_00046330|organism=Clytia hemisphaerica|type=transcript|length=918bp
acacttaaagcaaaTGGAGTTCAAAGACTTGATGGTGAACTGTTTCAAAA
TAACTTTTATTTCATACAGCAGAGGGGgttcaaaaagattttaaacaTCC
CTCCGTGGACACCCTGTGAAGTGGTTTTGACCTATAAACTTTAGCAAGAT
CTAGAGttacttttaaaatcttttgcaTTTGGTTGCTCCCAGtttttttt
tcccaaaagaGGCTTTTCTGGTTTTTATACAGGTTTTTATACAGGTTTTT
AAGGGTTTCCCAAACCTAAtgaaaatccgccattatggaagccgACGTTC
GAATTTGTAGAGACGACTCCTTGCGCAAATaaaacgtttgcttccatagt
GGCAAAAGGGgcctggaattcccgagttattttttctgagTTACTTTGCa
tttgacgtcataatttcagttttacgacgtcattatgacgtcagaaaaat
gaaaaaaatgaaaaatgataacTTGAGTTTTTTTTGCGGcttttaacttt
tcgaattATTTGGTAATTATTTACTCGATAAAAACtctaacaaaaataaa
attatggTGTCacatggaaaataactcggtaAAAATAACTTGGAAATTCC
AGGCCCCATGGCAAAAGTTACGTAACTTGGCCAACTTGAAAATCCTttat
tcgtgatattcatgacgtaatgttttctacggaaacacTCCGGTTTTTGT
CATCAGTGGAAATTTTGATAAAGggaaaaattgtttaaattttGCCAGTA
CTGGCAAATGATGaccattacgtcatgaatatcttAAATAACAAGAAGTG
AATGTGTGGTGAAGGATTGCTCCAAACCCTTTACTACACACTCTATTAAC
TTTCTCATTGGGcgcttccagaaaaaaattgaatatggggggtggaggat
ataacattttttggaaat Run BLAST on NCBI transcript from alignment at scaffold_108:282966..283883 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046330 ID=TCONS_00046330|Name=TCONS_00046330|organism=Clytia hemisphaerica|type=transcript|length=918bp|location=Sequence derived from alignment at scaffold_108:282966..283883 (Clytia hemisphaerica)
atttccaaaaaatgttatatcctccaccccccatattcaatttttttctg
gaagcgCCCAATGAGAAAGTTAATAGAGTGTGTAGTAAAGGGTTTGGAGC
AATCCTTCACCACACATTCACTTCTTGTTATTTaagatattcatgacgta
atggtCATCATTTGCCAGTACTGGCaaaatttaaacaatttttccCTTTA
TCAAAATTTCCACTGATGACAAAAACCGGAgtgtttccgtagaaaacatt
acgtcatgaatatcacgaataaAGGATTTTCAAGTTGGCCAAGTTACGTA
ACTTTTGCCATGGGGCCTGGAATTTCCAAGTTATTTTtaccgagttattt
tccatgtGACAccataattttatttttgttagaGTTTTTATCGAGTAAAT
AATTACCAAATaattcgaaaagttaaaagCCGCAAAAAAAACTCAAgtta
tcatttttcatttttttcatttttctgacgtcataatgacgtcgtaaaac
tgaaattatgacgtcaaatGCAAAGTAActcagaaaaaataactcgggaa
ttccaggcCCCTTTTGCCactatggaagcaaacgttttATTTGCGCAAGG
AGTCGTCTCTACAAATTCGAACGTcggcttccataatggcggattttcaT
TAGGTTTGGGAAACCCTTAAAAACCTGTATAAAAACCTGTATAAAAACCA
GAAAAGCCtcttttgggaaaaaaaaaCTGGGAGCAACCAAAtgcaaaaga
ttttaaaagtaaCTCTAGATCTTGCTAAAGTTTATAGGTCAAAACCACTT
CACAGGGTGTCCACGGAGGGAtgtttaaaatctttttgaacCCCCTCTGC
TGTATGAAATAAAAGTTATTTTGAAACAGTTCACCATCAAGTCTTTGAAC
TCCAtttgctttaagtgt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046330-exon-scaffold_108-1491911889:282966..283883 | TCONS_00046330-exon-scaffold_108-1491911889:282966..283883 | Clytia hemisphaerica | exon |
| TCONS_00046330-exon-scaffold_108-1510915933:282966..283883 | TCONS_00046330-exon-scaffold_108-1510915933:282966..283883 | Clytia hemisphaerica | exon |
| TCONS_00046330-exon-scaffold_108-1575043694:282966..283883 | TCONS_00046330-exon-scaffold_108-1575043694:282966..283883 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_108 | supercontig | scaffold_108:282966..283883 . |
Blast
The following BLAST results are available for this feature:
|
