TCONS_00046014 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046014
Unique NameTCONS_00046014
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3842

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046014 ID=TCONS_00046014|Name=TCONS_00046014|organism=Clytia hemisphaerica|type=transcript|length=3842bp
CGTTTCGCttcacttttcattttaaatagaAGAAAGAAGCCATTTTGAAA
TGctgttgaaattttgaagaaattgaaagGATTAGAATTACCAATTGGAA
AGATGAAGAGCCATTGGTTGATACTCCTCTGCATTGTCTCAATCAGCCAA
TCACAGAGCGACTTCAATAACTTCGACCAATCAGAAAAATGGAATTACCC
TCCAATTTTGCAAAGTCAAGCAGTGTCACGTGACTTTATTCAGAATGCTG
TTCCGACGGAAGATGTTCCTTTCGAAAAATCCATTCCCTTTTCAGACGAT
AACGAAGCTCGCGAAATTCCCTCTTACCAAAACGTGACGTCAGAAGGGGA
AACCCCTGGAGATTCCCCTGCCAGAGAGTTTCGTCTCCATAGTAACGTGA
CTGGAGGGGAATCCCCTGATTCAGAAGATCAAAGTGTTCACGATGGGGAG
GATTTGCAAGATTATTCTCAAGTGTATGGAAACAAGTTATTGCCAGGAGA
CGTTCCGCAAAATACACAAAGCATGATTCAACAAGAGGAAAAAGAAAGTG
AACTCATGAATAGCAGATTGGAATTCACCAAAAACTCTGCCCCAGAAAGC
GGAGGAGAGCAACACAGCGAGGGAGTGCAAGAAGTTCAAGAAAACGAAGG
AGCACAACTACAACAGGCTAATGAACAACAGCAAACAACGGACGGTGTTG
AGGCTAACGAGAAAGCTCAGCAGGCTGATGAACAAGCTACAAATACTGCA
GAGGCTAGTGAGCAGGCCACAGGGACTGAAGAGGCTAGTGAAAGGGCACA
GACTGGTGTACCTACGGAGGAGGGTTCACAAGCAGTCCAAGAGAATGGAG
GAGAGCAACAAACGACCAACGATGGTGTGTTAGCAAATAACGAAGCGAAA
ACGATGGAAGCAGAACAAGCAAACGATGGAGTGTCACCAAACACCATGAC
GGAGGGTGAGGAACCTATGGGGAAATTTGTGAACGACGCAGAGAAAATCG
ATGGCGGTGGTGGTGTCATTGGAGAGCCACAGGAACGCTTCTTAGCCAAC
AAAACGAACACAGATGATTCCATGGACAAATTATTGAGCGAGAACGTTCC
GGTGGAGGGAGAAGGACAGCAACGCTTTTTCGTGAACAGAAATTCATCAT
CGAACACTAACGAAGGAGAGCAGGGAATGGAAGGCGAAGGAGAACAAACG
CAGACAATGGtacaaataaaatcaaatcaaaaagaagTGACTGAAAATGC
AATGGTCAGAGGAAAGATTTCCACCATCAAGGCTAAAGGACAGAAAGTTG
TTCAGGCTAATAAACAGACACTTCCACAGGCTAAACAACCATCACAACAA
GCATCTGCTCCATCGTCGAATAAAAAGAAACCAAAGCAAATGAAGAAAAC
GGACCAGCAAGATGAAATACAAACCATGGATTTGACATACCAACCAATGA
AGAAACTGAAGTCtccaaagaaacaaaagaaacacaaATCAACAACAATG
AAAACTCAATCGGAGAACTATTTCAACTTCAGTCCAGTACCTCCCTTCAG
AATCGCACCTCAAGCCAATCTCCCTTACTATCGACCATTACAAACACCTC
TTGCTCAGCCTGTGTTCTACCAACAAAGTACAGCCTCCCAGCCTGTATCC
TCCAAAACCCAACAGGATTTGACAtcatttcaacaaccaacatttACGCA
AGCTCAATGGAAAGATGCTTTTCAACAGTCTTTTCAACAAGAACCTccaa
aaggaatttttcaaCAACAACCCGCCgcaaccaacaaaacaaaacaaaaa
tcaacgAAAATCAAACAGTTACAAAAaattgcaacaaaaacgaaaaagcT
ATCAAAATCTCCATCAAAGAGCACTGAATCAAAATTGAAGCCTGCGCCCT
TAAATACAACGGACGCCACAGGACGAGGGTTCGTCCCTAATGCCCTGATG
AAACCATTGGTGAAATCAGTGGCCAAACTTAACCAATCAGTCGCCCACTT
TGCTAAGAACATCTCGTTATCTTCAGAGATCTCTCACcctaaaaatatcg
aaaaaccTTTGACCAAAAGTATCAAACAGCCTCTAACCAAGTTCGTTTCA
CCTTTGAGAAACATACCGCTTCTAAACAAACTCGTGCATAAAGAAAACAA
TGgcacaaaaaaggaaaaagtttcAACTAAAAAGTCAACacagaaacaaa
acaaatcaaaagcttcgaaaaggaaatcaaattcTTGTCGTAATTACAGG
GAATGCCTCGAAAAATGGTTTTCGAGATACAGTTTACGAATTACACCTTC
TGTAAATACTATCGAGAAATTACGAGACTTTTTCTcgatcattttcaaaa
tgaaatacgAACAGAAACTACGAAAACAAATTGTGCAGTATATGGAAGAG
TTGTCAGACCTCCGATTAATCAACTGGGCCACCATCTATAACCAACGTCC
GAAAGTGGGAGATTGGCTAAATATCGATTTCCTTCGAATGCCTTTGGGAA
TTGAAGTCCCAGCTAACCTGAAAGAGAGTGTTATGTTCCATAGAATcgtt
ttattgaaaggaaagatCGACGGAATTACGGAGAATTTACGAAACATGAA
AGTTGTCGAAACATCACGAAACAAAATGAAAGAGATGGAAAAGAAACGAA
GCTTTTTCGAGAAAAGTTTGAACGGGTTACGAAGCAATAAGACCATTTTT
ACGACATATCGAAGCGAGGCTCCTTCAGTAGCTGTTTCAGGTTTTGATCG
TGCATCACAAGTATGGTCGCAATGTGCACCCAAGGAAAACAAAGGTCTGT
TCGCAGGTGTTTATCAAAACATGATGTCGATGAATAGTTACCAATGCGCT
CTCTTCGCGTTCATGAAATGCATTCGAGATAAACAAGCATCTTCCTTTAA
ACGAAACGAAAAAGGTTTTGCCTCGCTTATTCAACTCCATTATGATTACG
gagcaaaacaaaacaaactcattccaattacgtcacaaaataaattcGAT
CACGAACGCTTAACGTCCGCTTACTGTGAAAGCGCGGATAAAGTAAGATG
TCTTCAGGAAGATGGAGTCACTTATGATGATTCGGTGGAGTTCGACGGAC
ATTACTATTGTCAGAATTACTTCGGTTGCTTAGCAACATGCGGAGAGAAA
TGTTTTCTTCGAGAGAGGAATCTCTTACCGGACGAAGTTGAAAGATTGAC
CAATTGGTTATCACGTGATCAAAAGCATTACAAAGCGGAAAGTGAACTTT
GGAAGGAATGTTGCGCAGATGCGAAAAATTGTATTCCGTTGGAAAAATCG
AAGGGTGAAAAAGAACTAAAAAGAGTCAAACATcattgaatgaatgaatg
aattaatgaatgaatgaattaacCTGTAAATAAAACTGTGAAGAAATATA
TTAGTCAGTATCGTAATCGCTTAAAATAATGACCACAATTTTATGACCCA
ACGAACTTTAATGTATGGTACTAATTATGTTGGTTGCCTTGTTGGAAACA
TAATTTCGAGTagatcatattatttaaaaaacaaatatcaTAAATGATTC
ATCCATAAATAGAAACTTTATTGTACGGGTGATGAAGGTAACTAACTAGT
GATTTAGAGTCGTTTGAAATTTCCCCATTTTGGTTATCTTAATATTTTCT
TGAGtatcaaaaaagaaacaaaaaaaatctacaaaaaatttaatttattt
atttactacaATTCGGTTGGTCGGTCGAGTTAAGTGAAGCTGAGTTGCGT
TGAAAGAGTTTTCGAACGTTTTCCCCATCAGAGATTCGAAGGTTTTTCCC
ATCAGAGATTCGAATGATTTATCAAGTCCGAAGGGTGTAATC
Run BLAST on NCBI

protein sequence of TCONS_00046014-protein

>TCONS_00046014-protein ID=TCONS_00046014-protein|Name=TCONS_00046014-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1078bp
MKSHWLILLCIVSISQSQSDFNNFDQSEKWNYPPILQSQAVSRDFIQNAV
PTEDVPFEKSIPFSDDNEAREIPSYQNVTSEGETPGDSPAREFRLHSNVT
GGESPDSEDQSVHDGEDLQDYSQVYGNKLLPGDVPQNTQSMIQQEEKESE
LMNSRLEFTKNSAPESGGEQHSEGVQEVQENEGAQLQQANEQQQTTDGVE
ANEKAQQADEQATNTAEASEQATGTEEASERAQTGVPTEEGSQAVQENGG
EQQTTNDGVLANNEAKTMEAEQANDGVSPNTMTEGEEPMGKFVNDAEKID
GGGGVIGEPQERFLANKTNTDDSMDKLLSENVPVEGEGQQRFFVNRNSSS
NTNEGEQGMEGEGEQTQTMVQIKSNQKEVTENAMVRGKISTIKAKGQKVV
QANKQTLPQAKQPSQQASAPSSNKKKPKQMKKTDQQDEIQTMDLTYQPMK
KLKSPKKQKKHKSTTMKTQSENYFNFSPVPPFRIAPQANLPYYRPLQTPL
AQPVFYQQSTASQPVSSKTQQDLTSFQQPTFTQAQWKDAFQQSFQQEPPK
GIFQQQPAATNKTKQKSTKIKQLQKIATKTKKLSKSPSKSTESKLKPAPL
NTTDATGRGFVPNALMKPLVKSVAKLNQSVAHFAKNISLSSEISHPKNIE
KPLTKSIKQPLTKFVSPLRNIPLLNKLVHKENNGTKKEKVSTKKSTQKQN
KSKASKRKSNSCRNYRECLEKWFSRYSLRITPSVNTIEKLRDFFSIIFKM
KYEQKLRKQIVQYMEELSDLRLINWATIYNQRPKVGDWLNIDFLRMPLGI
EVPANLKESVMFHRIVLLKGKIDGITENLRNMKVVETSRNKMKEMEKKRS
FFEKSLNGLRSNKTIFTTYRSEAPSVAVSGFDRASQVWSQCAPKENKGLF
AGVYQNMMSMNSYQCALFAFMKCIRDKQASSFKRNEKGFASLIQLHYDYG
AKQNKLIPITSQNKFDHERLTSAYCESADKVRCLQEDGVTYDDSVEFDGH
YYCQNYFGCLATCGEKCFLRERNLLPDEVERLTNWLSRDQKHYKAESELW
KECCADAKNCIPLEKSKGEKELKRVKHH
Run BLAST on NCBI

transcript from alignment at scaffold_105:653629..657627+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046014 ID=TCONS_00046014|Name=TCONS_00046014|organism=Clytia hemisphaerica|type=transcript|length=3999bp|location=Sequence derived from alignment at scaffold_105:653629..657627+ (Clytia hemisphaerica)
CGTTTCGCttcacttttcattttaaatagaAGAAAGAAGCCATTTTGAAA TGctgttgaaattttgaagaaattgaaagGATTAGAATTACCAATTGGAA AGGTAAAAGTTTTTctctatttgaaaaaaaaagacttctaaaaATAATTC CTTCTATCAGACTAGGTGTAAGTAACTTCAAAATGCGAAACCAGAAAATT TTCCATAAAGAAGGTCTAAGTGTATTCTAGGAAGTTTAACAAGCTTGTTT TCAATTTAGATGAAGAGCCATTGGTTGATACTCCTCTGCATTGTCTCAAT CAGCCAATCACAGAGCGACTTCAATAACTTCGACCAATCAGAAAAATGGA ATTACCCTCCAATTTTGCAAAGTCAAGCAGTGTCACGTGACTTTATTCAG AATGCTGTTCCGACGGAAGATGTTCCTTTCGAAAAATCCATTCCCTTTTC AGACGATAACGAAGCTCGCGAAATTCCCTCTTACCAAAACGTGACGTCAG AAGGGGAAACCCCTGGAGATTCCCCTGCCAGAGAGTTTCGTCTCCATAGT AACGTGACTGGAGGGGAATCCCCTGATTCAGAAGATCAAAGTGTTCACGA TGGGGAGGATTTGCAAGATTATTCTCAAGTGTATGGAAACAAGTTATTGC CAGGAGACGTTCCGCAAAATACACAAAGCATGATTCAACAAGAGGAAAAA GAAAGTGAACTCATGAATAGCAGATTGGAATTCACCAAAAACTCTGCCCC AGAAAGCGGAGGAGAGCAACACAGCGAGGGAGTGCAAGAAGTTCAAGAAA ACGAAGGAGCACAACTACAACAGGCTAATGAACAACAGCAAACAACGGAC GGTGTTGAGGCTAACGAGAAAGCTCAGCAGGCTGATGAACAAGCTACAAA TACTGCAGAGGCTAGTGAGCAGGCCACAGGGACTGAAGAGGCTAGTGAAA GGGCACAGACTGGTGTACCTACGGAGGAGGGTTCACAAGCAGTCCAAGAG AATGGAGGAGAGCAACAAACGACCAACGATGGTGTGTTAGCAAATAACGA AGCGAAAACGATGGAAGCAGAACAAGCAAACGATGGAGTGTCACCAAACA CCATGACGGAGGGTGAGGAACCTATGGGGAAATTTGTGAACGACGCAGAG AAAATCGATGGCGGTGGTGGTGTCATTGGAGAGCCACAGGAACGCTTCTT AGCCAACAAAACGAACACAGATGATTCCATGGACAAATTATTGAGCGAGA ACGTTCCGGTGGAGGGAGAAGGACAGCAACGCTTTTTCGTGAACAGAAAT TCATCATCGAACACTAACGAAGGAGAGCAGGGAATGGAAGGCGAAGGAGA ACAAACGCAGACAATGGtacaaataaaatcaaatcaaaaagaagTGACTG AAAATGCAATGGTCAGAGGAAAGATTTCCACCATCAAGGCTAAAGGACAG AAAGTTGTTCAGGCTAATAAACAGACACTTCCACAGGCTAAACAACCATC ACAACAAGCATCTGCTCCATCGTCGAATAAAAAGAAACCAAAGCAAATGA AGAAAACGGACCAGCAAGATGAAATACAAACCATGGATTTGACATACCAA CCAATGAAGAAACTGAAGTCtccaaagaaacaaaagaaacacaaATCAAC AACAATGAAAACTCAATCGGAGAACTATTTCAACTTCAGTCCAGTACCTC CCTTCAGAATCGCACCTCAAGCCAATCTCCCTTACTATCGACCATTACAA ACACCTCTTGCTCAGCCTGTGTTCTACCAACAAAGTACAGCCTCCCAGCC TGTATCCTCCAAAACCCAACAGGATTTGACAtcatttcaacaaccaacat ttACGCAAGCTCAATGGAAAGATGCTTTTCAACAGTCTTTTCAACAAGAA CCTccaaaaggaatttttcaaCAACAACCCGCCgcaaccaacaaaacaaa acaaaaatcaacgAAAATCAAACAGTTACAAAAaattgcaacaaaaacga aaaagcTATCAAAATCTCCATCAAAGAGCACTGAATCAAAATTGAAGCCT GCGCCCTTAAATACAACGGACGCCACAGGACGAGGGTTCGTCCCTAATGC CCTGATGAAACCATTGGTGAAATCAGTGGCCAAACTTAACCAATCAGTCG CCCACTTTGCTAAGAACATCTCGTTATCTTCAGAGATCTCTCACcctaaa aatatcgaaaaaccTTTGACCAAAAGTATCAAACAGCCTCTAACCAAGTT CGTTTCACCTTTGAGAAACATACCGCTTCTAAACAAACTCGTGCATAAAG AAAACAATGgcacaaaaaaggaaaaagtttcAACTAAAAAGTCAACacag aaacaaaacaaatcaaaagcttcgaaaaggaaatcaaattcTTGTCGTAA TTACAGGGAATGCCTCGAAAAATGGTTTTCGAGATACAGTTTACGAATTA CACCTTCTGTAAATACTATCGAGAAATTACGAGACTTTTTCTcgatcatt ttcaaaatgaaatacgAACAGAAACTACGAAAACAAATTGTGCAGTATAT GGAAGAGTTGTCAGACCTCCGATTAATCAACTGGGCCACCATCTATAACC AACGTCCGAAAGTGGGAGATTGGCTAAATATCGATTTCCTTCGAATGCCT TTGGGAATTGAAGTCCCAGCTAACCTGAAAGAGAGTGTTATGTTCCATAG AATcgttttattgaaaggaaagatCGACGGAATTACGGAGAATTTACGAA ACATGAAAGTTGTCGAAACATCACGAAACAAAATGAAAGAGATGGAAAAG AAACGAAGCTTTTTCGAGAAAAGTTTGAACGGGTTACGAAGCAATAAGAC CATTTTTACGACATATCGAAGCGAGGCTCCTTCAGTAGCTGTTTCAGGTT TTGATCGTGCATCACAAGTATGGTCGCAATGTGCACCCAAGGAAAACAAA GGTCTGTTCGCAGGTGTTTATCAAAACATGATGTCGATGAATAGTTACCA ATGCGCTCTCTTCGCGTTCATGAAATGCATTCGAGATAAACAAGCATCTT CCTTTAAACGAAACGAAAAAGGTTTTGCCTCGCTTATTCAACTCCATTAT GATTACGgagcaaaacaaaacaaactcattccaattacgtcacaaaataa attcGATCACGAACGCTTAACGTCCGCTTACTGTGAAAGCGCGGATAAAG TAAGATGTCTTCAGGAAGATGGAGTCACTTATGATGATTCGGTGGAGTTC GACGGACATTACTATTGTCAGAATTACTTCGGTTGCTTAGCAACATGCGG AGAGAAATGTTTTCTTCGAGAGAGGAATCTCTTACCGGACGAAGTTGAAA GATTGACCAATTGGTTATCACGTGATCAAAAGCATTACAAAGCGGAAAGT GAACTTTGGAAGGAATGTTGCGCAGATGCGAAAAATTGTATTCCGTTGGA AAAATCGAAGGGTGAAAAAGAACTAAAAAGAGTCAAACATcattgaatga atgaatgaattaatgaatgaatgaattaacCTGTAAATAAAACTGTGAAG AAATATATTAGTCAGTATCGTAATCGCTTAAAATAATGACCACAATTTTA TGACCCAACGAACTTTAATGTATGGTACTAATTATGTTGGTTGCCTTGTT GGAAACATAATTTCGAGTagatcatattatttaaaaaacaaatatcaTAA ATGATTCATCCATAAATAGAAACTTTATTGTACGGGTGATGAAGGTAACT AACTAGTGATTTAGAGTCGTTTGAAATTTCCCCATTTTGGTTATCTTAAT ATTTTCTTGAGtatcaaaaaagaaacaaaaaaaatctacaaaaaatttaa tttatttatttactacaATTCGGTTGGTCGGTCGAGTTAAGTGAAGCTGA GTTGCGTTGAAAGAGTTTTCGAACGTTTTCCCCATCAGAGATTCGAAGGT TTTTCCCATCAGAGATTCGAATGATTTATCAAGTCCGAAGGGTGTAATC

Coding sequence (CDS) from alignment at scaffold_105:653629..657627+

>TCONS_00046014 ID=TCONS_00046014|Name=TCONS_00046014|organism=Clytia hemisphaerica|type=CDS|length=3237bp|location=Sequence derived from alignment at scaffold_105:653629..657627+ (Clytia hemisphaerica)
ATGAAGAGCCATTGGTTGATACTCCTCTGCATTGTCTCAATCAGCCAATC
ACAGAGCGACTTCAATAACTTCGACCAATCAGAAAAATGGAATTACCCTC
CAATTTTGCAAAGTCAAGCAGTGTCACGTGACTTTATTCAGAATGCTGTT
CCGACGGAAGATGTTCCTTTCGAAAAATCCATTCCCTTTTCAGACGATAA
CGAAGCTCGCGAAATTCCCTCTTACCAAAACGTGACGTCAGAAGGGGAAA
CCCCTGGAGATTCCCCTGCCAGAGAGTTTCGTCTCCATAGTAACGTGACT
GGAGGGGAATCCCCTGATTCAGAAGATCAAAGTGTTCACGATGGGGAGGA
TTTGCAAGATTATTCTCAAGTGTATGGAAACAAGTTATTGCCAGGAGACG
TTCCGCAAAATACACAAAGCATGATTCAACAAGAGGAAAAAGAAAGTGAA
CTCATGAATAGCAGATTGGAATTCACCAAAAACTCTGCCCCAGAAAGCGG
AGGAGAGCAACACAGCGAGGGAGTGCAAGAAGTTCAAGAAAACGAAGGAG
CACAACTACAACAGGCTAATGAACAACAGCAAACAACGGACGGTGTTGAG
GCTAACGAGAAAGCTCAGCAGGCTGATGAACAAGCTACAAATACTGCAGA
GGCTAGTGAGCAGGCCACAGGGACTGAAGAGGCTAGTGAAAGGGCACAGA
CTGGTGTACCTACGGAGGAGGGTTCACAAGCAGTCCAAGAGAATGGAGGA
GAGCAACAAACGACCAACGATGGTGTGTTAGCAAATAACGAAGCGAAAAC
GATGGAAGCAGAACAAGCAAACGATGGAGTGTCACCAAACACCATGACGG
AGGGTGAGGAACCTATGGGGAAATTTGTGAACGACGCAGAGAAAATCGAT
GGCGGTGGTGGTGTCATTGGAGAGCCACAGGAACGCTTCTTAGCCAACAA
AACGAACACAGATGATTCCATGGACAAATTATTGAGCGAGAACGTTCCGG
TGGAGGGAGAAGGACAGCAACGCTTTTTCGTGAACAGAAATTCATCATCG
AACACTAACGAAGGAGAGCAGGGAATGGAAGGCGAAGGAGAACAAACGCA
GACAATGGtacaaataaaatcaaatcaaaaagaagTGACTGAAAATGCAA
TGGTCAGAGGAAAGATTTCCACCATCAAGGCTAAAGGACAGAAAGTTGTT
CAGGCTAATAAACAGACACTTCCACAGGCTAAACAACCATCACAACAAGC
ATCTGCTCCATCGTCGAATAAAAAGAAACCAAAGCAAATGAAGAAAACGG
ACCAGCAAGATGAAATACAAACCATGGATTTGACATACCAACCAATGAAG
AAACTGAAGTCtccaaagaaacaaaagaaacacaaATCAACAACAATGAA
AACTCAATCGGAGAACTATTTCAACTTCAGTCCAGTACCTCCCTTCAGAA
TCGCACCTCAAGCCAATCTCCCTTACTATCGACCATTACAAACACCTCTT
GCTCAGCCTGTGTTCTACCAACAAAGTACAGCCTCCCAGCCTGTATCCTC
CAAAACCCAACAGGATTTGACAtcatttcaacaaccaacatttACGCAAG
CTCAATGGAAAGATGCTTTTCAACAGTCTTTTCAACAAGAACCTccaaaa
ggaatttttcaaCAACAACCCGCCgcaaccaacaaaacaaaacaaaaatc
aacgAAAATCAAACAGTTACAAAAaattgcaacaaaaacgaaaaagcTAT
CAAAATCTCCATCAAAGAGCACTGAATCAAAATTGAAGCCTGCGCCCTTA
AATACAACGGACGCCACAGGACGAGGGTTCGTCCCTAATGCCCTGATGAA
ACCATTGGTGAAATCAGTGGCCAAACTTAACCAATCAGTCGCCCACTTTG
CTAAGAACATCTCGTTATCTTCAGAGATCTCTCACcctaaaaatatcgaa
aaaccTTTGACCAAAAGTATCAAACAGCCTCTAACCAAGTTCGTTTCACC
TTTGAGAAACATACCGCTTCTAAACAAACTCGTGCATAAAGAAAACAATG
gcacaaaaaaggaaaaagtttcAACTAAAAAGTCAACacagaaacaaaac
aaatcaaaagcttcgaaaaggaaatcaaattcTTGTCGTAATTACAGGGA
ATGCCTCGAAAAATGGTTTTCGAGATACAGTTTACGAATTACACCTTCTG
TAAATACTATCGAGAAATTACGAGACTTTTTCTcgatcattttcaaaatg
aaatacgAACAGAAACTACGAAAACAAATTGTGCAGTATATGGAAGAGTT
GTCAGACCTCCGATTAATCAACTGGGCCACCATCTATAACCAACGTCCGA
AAGTGGGAGATTGGCTAAATATCGATTTCCTTCGAATGCCTTTGGGAATT
GAAGTCCCAGCTAACCTGAAAGAGAGTGTTATGTTCCATAGAATcgtttt
attgaaaggaaagatCGACGGAATTACGGAGAATTTACGAAACATGAAAG
TTGTCGAAACATCACGAAACAAAATGAAAGAGATGGAAAAGAAACGAAGC
TTTTTCGAGAAAAGTTTGAACGGGTTACGAAGCAATAAGACCATTTTTAC
GACATATCGAAGCGAGGCTCCTTCAGTAGCTGTTTCAGGTTTTGATCGTG
CATCACAAGTATGGTCGCAATGTGCACCCAAGGAAAACAAAGGTCTGTTC
GCAGGTGTTTATCAAAACATGATGTCGATGAATAGTTACCAATGCGCTCT
CTTCGCGTTCATGAAATGCATTCGAGATAAACAAGCATCTTCCTTTAAAC
GAAACGAAAAAGGTTTTGCCTCGCTTATTCAACTCCATTATGATTACGga
gcaaaacaaaacaaactcattccaattacgtcacaaaataaattcGATCA
CGAACGCTTAACGTCCGCTTACTGTGAAAGCGCGGATAAAGTAAGATGTC
TTCAGGAAGATGGAGTCACTTATGATGATTCGGTGGAGTTCGACGGACAT
TACTATTGTCAGAATTACTTCGGTTGCTTAGCAACATGCGGAGAGAAATG
TTTTCTTCGAGAGAGGAATCTCTTACCGGACGAAGTTGAAAGATTGACCA
ATTGGTTATCACGTGATCAAAAGCATTACAAAGCGGAAAGTGAACTTTGG
AAGGAATGTTGCGCAGATGCGAAAAATTGTATTCCGTTGGAAAAATCGAA
GGGTGAAAAAGAACTAAAAAGAGTCAAACATcattga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029404XLOC_029404Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046014-proteinTCONS_00046014-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046014-exon-scaffold_105-1491911889:653629..653730TCONS_00046014-exon-scaffold_105-1491911889:653629..653730Clytia hemisphaericaexon
TCONS_00046014-exon-scaffold_105-1510915933:653629..653730TCONS_00046014-exon-scaffold_105-1510915933:653629..653730Clytia hemisphaericaexon
TCONS_00046014-exon-scaffold_105-1575043694:653629..653730TCONS_00046014-exon-scaffold_105-1575043694:653629..653730Clytia hemisphaericaexon
TCONS_00046014-exon-scaffold_105-1491911889:653888..657627TCONS_00046014-exon-scaffold_105-1491911889:653888..657627Clytia hemisphaericaexon
TCONS_00046014-exon-scaffold_105-1510915933:653888..657627TCONS_00046014-exon-scaffold_105-1510915933:653888..657627Clytia hemisphaericaexon
TCONS_00046014-exon-scaffold_105-1575043694:653888..657627TCONS_00046014-exon-scaffold_105-1575043694:653888..657627Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_105supercontigscaffold_105:653629..657627 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0.0532378 0.010888 0.331732 0.288869 0.350845 0.163602 0.179111 0.781307 0.332397 0.257137 0 0 0.106007 0.093945 0.0550136 0.0374345 0 0 0.0144594 0 0.0113597 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046014 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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