TCONS_00045874 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045874
Unique NameTCONS_00045874
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2305

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045874 ID=TCONS_00045874|Name=TCONS_00045874|organism=Clytia hemisphaerica|type=transcript|length=2305bp
GACTGCTTGACTACATGCTTTTCTCTTGTGTGATTTAACTATAGGAGAAG
TTAGGATATAGCCGGGATACGGCTTCTAGCTAACTCTACTTGCGCGACTA
AACGATTTTTGTGTATGCAAGGGTCGCTATTTTTTCAAGGAGttaaatat
tcacacaaaacaCGAAGttacacagacagacagaacATGACCAAGAACAA
TGAAATGCAATTATGTGTAGCATGCAATAAGCTTGTTTCAATTGGTGAAA
CATCTTGCAAATGTGGACACGTTTTACGCGAAGCTCTCACGTTAAAGGAA
GAGCAAACCTCTCGCAAACGAAGAGCTGTCTACCGACCTAATTCCGTCAG
TTCAGAATGGATTTCTATGAAAGAAAAGTCAGAACTGAAGATGGCTTTGA
AGAAGtCCAAACTTGAGAATGGTCATCAAAATATCACACACATCGGTCAC
GGCAACACAACCACCAATAACGCCTCCGTCACGCCCCTCCAAAATAacac
aacaaacaacaaaagcAACCCTCTCAACGACGCTAATAACAACAGCTGCA
CGGTGGCGGTGACGTCAGCGCCAACAATTCCACGCCCCGTCGGCCGCCCA
CGTAAAAATGGAAGCACATTCAACAACcgtaaaaaatcaacaaaacaaac
aTCCGCTAACGCCGTCTTCAATAGCACAGCCCCGATCAGTAATAGTAGCC
AAATCACCAAGAATAACGAAAATGCACTCACCAACAACACTAAAGAAAAC
ACtgacaaacaaaacaaactaaGAGGGCTTCTAGAAATGATTGAAAACTC
TTACCAAAACATTTACTTCAATAAATGCAAAAGTTACAAGAAAGCTAAAC
TAGCTGATTTGGAATTTGAATTTGACTTTTCGGCTTTCGATAGTCACAAT
CCCTATTATCCATCAGCGCTGGAAGACATTAacacaaaaatcaacaaaac
caaTAGTTTTTGGAAAAGCCTACATTGATAATTGAATGAGATGAATTCTG
GGGGTTTTAAAGAATGTGGCCAAGCAATGTGGTTCCTACTGGTCACTGaa
gttttaatgaaaaaacgaaaatgatgaaaaaaagaaaactttgctTGTAT
ATGTTGGCTAATGTACTTCTTCTAATCAGAAAATACTTTTGGGAGCATCT
GCAGATGGTCAAATTAGATATAAAGACATTGTTTAAAATGTCGCATGTGA
TTGGTGCATTATAGTGTTTAAAATTGTCGCATTTTAATATGCGCATATAC
GGGTCACGTGGTATGGTCACGTGATGTTTTCGTGGTTGGTGGTTGGTTGC
TGTTTAAAACGTATCCTTGTTTATTATGATATTTCAAATtgaatgtttga
attttttaatgatATCAATGTTTGGTAAATTGATACTACCCACAATTAAA
ATAAGCTCTGAATGATTTTCTATTCTATGTCACCCGAATAAAGGCGATAA
TCTGAGAGAGGTCACTAGAGAATGTTTTCAGGCTAGGTAAAGTTTGCATA
ATTTTCGCCATTATGtaagaaaattcttcaaatttggatattttcttcaa
TTGTGGTATATTTCCCTTCTTCTCTTCTATTTCTAAGTTACATAACCTAA
CCATACCAAACCTGATCGATCTCTATTATAAAGCCAAACCCGGTATTGCT
AAAATGCTCTTTTTAACCCTTTCTGTGCCgctgtcggcatatgccgacta
gagcattttcgatttctttgccggtGTCGGTATTTGCCGACAAGAGAGat
ctcgacctatttgccagaggtttttttaagtttgttgAACGTTCAATCTT
GAACTATATTTCATTAAATAGCacagttgaataattaaaatatattttaa
agatgtttttcataattatacatttttcaactcaaagtaaacacatatca
cttatatttctgatatttttcagaaaataaagctaAATGTGATGGTAAAC
TTCTGTGGTCGCTCATGTCGGGATATGTcgacatctggcaaataggtcga
acctatGGAACGGCAGTTGGTTAAGGTGACTTTTATTGTATGGTCTACAT
TTTTAATGTCGGTTAAAAGAAGCTCCCGCGAGATTTTATAAACGGGTAAA
TCAGTGACTTTTATATTTGCTGAAAATTGAACCCCGTAAAGATTTTAAGT
TTAACTGGTTGATTGGTTTGCTTTGGTTTAGTTtaattgagtttaataat
acaTCTTCTAAAGCCTTAGCAATTGATCTGCACACGAGTCGACTTTAAAT
AAACGCAACTTTAAGAGGCTGAAAAAAGtacgcgaaaaaaaaattacaaa
agaag
Run BLAST on NCBI

protein sequence of TCONS_00045874-protein

>TCONS_00045874-protein ID=TCONS_00045874-protein|Name=TCONS_00045874-protein|organism=Clytia hemisphaerica|type=polypeptide|length=287bp
MQGSLFFQGVKYSHKTRSYTDRQNMTKNNEMQLCVACNKLVSIGETSCKC
GHVLREALTLKEEQTSRKRRAVYRPNSVSSEWISMKEKSELKMALKKSKL
ENGHQNITHIGHGNTTTNNASVTPLQNNTTNNKSNPLNDANNNSCTVAVT
SAPTIPRPVGRPRKNGSTFNNRKKSTKQTSANAVFNSTAPISNSSQITKN
NENALTNNTKENTDKQNKLRGLLEMIENSYQNIYFNKCKSYKKAKLADLE
FEFDFSAFDSHNPYYPSALEDINTKINKTNSFWKSLH
Run BLAST on NCBI

transcript from alignment at scaffold_102:166875..174757-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045874 ID=TCONS_00045874|Name=TCONS_00045874|organism=Clytia hemisphaerica|type=transcript|length=7883bp|location=Sequence derived from alignment at scaffold_102:166875..174757- (Clytia hemisphaerica)
GACTGCTTGACTACATGCTTTTCTCTTGTGTGATTTAACTATAGGAGAAG
TTAGGATATAGCCGGGATACGGCTTCTAGCTAACTCTACTTGCGCGACTA
AACGATTTTTGTGTATGCAAGGGTCGCTATTTTTTCAAGGTAATCTTTTT
TCTGAACTTCAGTCAAAGATTACTGTTCTGATTTTTTTTGCCAAGTATAT
TTCTCTGTTTTTGCTTTGCTACCAATTTCTTTTTTTCTTTTTCTTATTTC
TTTGTTGAACTTTGAAGATTTATAGTATAATGTTGTTAGCCAAGAAGTTT
TTTTATTCCATTTTTTTAATTTGTAGTTTCGAAATATGTCGGATAAGAAG
TTTAAAGCTCATTTTCCTTTTTTTAAATGCTTTTGTGTGGTACCAGCCAG
CCAGTAGCTGATTGATATAAAACACAATGGCAAACATGTATTATGAAAGC
AGGAAAGTCTTCCAAAAAAAAAAGATATGGAAGTTTTTTCCACTACTCAA
CTGGCACACACGACGTTGTTTCAACGTTCAGATAACGTTATTTGGACGTT
AGGGATGTCACATGGACGTTGTTTTGACGCTGTGTGCCGTTTGGGTAGAA
GAGCTTCTCTTGTCTCGATTATCAATTTGTGTGTATTACGTTGTAACATT
GATAGGACTTTTAATAAGTAATCAAAACAAAAAACCCGTTATATCATCTT
ACCATAACATTACTCAAAATACGTTTCTATCGTTTCAGGAGTTAAATATT
CACACAAAACACGAAGTTACACAGACAGACAGAACATGACCAAGAACAAT
GAAATGCAATTATGTGTAGCATGCAATAAGCTTGTAAGTATAATTTTTTG
GACAATCTTGGATCTATCTATCCTTATTACTTATTAGTCCACTAGAATTT
CGAGACAATCTAGAACCTAGATTTTTATATACACGTTGGAAAGGTATTTT
TGACAGCTTTCGAATATGGAATAGTCAATTCCTTCGTCATGGGCAAAAAT
AGATGTTATGGACGGACAAAAGGGTGACAGATGGTCTACAATTCCGAAAT
TACCCCAAAAGGAAAATCTGACTGTGACCTTTTCTAGACATCGTTTTTAT
TTGTGGTTTGACAACTTGGTCCTACTGGACTATATTTCATTGAATACTCC
AAAGGTGGTTAATCTGTATAGGAGGCACTGTGTTCTCTTCTTTTTTGATT
TGAGGCGTAAATACAGGCCCGACAGAAGCGGCCCAATGGGCACAAACGTC
TTTTGGACGTCTAATGTACGTTTCTAGGACGCCCAAAGGTCTTAAAGCCG
TCCATTGAATGTCCATAAGACGTTGCGTGCCCATAGGGGGGGGACTGGGG
AGACTTCAGCCTCCCCACTTTTTAGCAAATAAGATTTTTTTCTCAAGTTT
CTTGCAAATTTTATCTCATTTTGAGCCTTCCTTCAGCCTCCCTATTTTAA
CGGTTGTTCCGCCAGGCCTGAAGTATAGGTAGCACATAATAATTTTTTGA
AATCACTCTTTCTTATTTATATCAAACAGAGACTCAAAGGGCTTATAATC
TTTTTAATCTAACACTTTCAATATATATTTTCTCCCGCGTGCTTCTTTTG
TTGAAAAGTGACATACCAAAGGTTCAATAAATTGAAATTCCCACTTCCCA
TTTGGCATAGAACGTTTAAAGAACATTCATTTAATGTACAATATCGACCT
AGGCTGCGCGCATACTCAAAAACAGTTTTTATTATAATGGATATTGGTTT
TTGTTAGGGTATAATCAGACTCGAAAAACTCAAATCCCTTAGGTTTTTAT
GTGGCACCCTTTTCATCATAATATACATTACATACACTTTTTTTATTGAG
AACATTTAAACTGTTTGAAGCCTTGATATGTTCTTAACTTTTTGAGTTTC
AAATCAAAAATGTTCTTGACAGGTTCTTATTTTTAGTAAGAGAAGCCTTA
AAATGTTCTTAACTTGTTCTTAATATTTTGGACATTAAAGCCTTATGTTC
TTATAGTTTATTCTTATGAAAAAAGTGTACTACCCAAAGTAAAGTAGCCT
CAGAATGGTGAAAATAATGTAACGGAGGTCTACTGGAATAGTTAAAGACT
GGAGCCTAATGATTTCTTTTAACGAAATATTCAACGGAAAAGAAGTTTGT
ATAAATTCCCAAATATTACGATGTTTCAATTCAGTCAAATGATTTACTTT
CACGAGGAAGTTGTAGAACACGAGACACGAGTCGTCATCATGTCTCGAAC
GAACTTTCATTTTAATATGTATGTGAATAGTTTAGTAAACATCTTTACAG
GGTGACAAGAGAGACGTTTCCTTCTTTCACTTTCTGCCCTTATTTTATGA
AACGAAAATTAAACATTTTTCGATTTTGTCGTCATTTAGGAGTCTCGAAA
CGAAAAACAATAGTACAACATATCGAAATTTTCATTTTTATCAACCTTTT
TTGCACAATACGAACGGGACGCAGTTTAGCTTTTACATCCCGATCAATAT
GACATGGAAAAAGCTACTTCTTATGAAGAAAAATACAGATCTGAAATATA
AGATACAATAAACTCTCTCTAATTCGAATCTTTCAGTATAATTCGAATTA
AAATGTTGGTCACCTCAGCGCTGTAAAGTCGCTTTAAGATACTTTCTGTT
ATTCGAACCCTTTTTAATTCGAAATAGAATCTGGACACTTTGAAGATCAA
ATCAGAGCAAATCAACTGTATTGAGATTTTTCTGCTCCAAAAACCTTTTC
CAAAATAGCACGGTTTTCTCATTAGAAGCTATTAGCGAATTCAAGTATCT
GCACGTTAAGGACGGTAGAGTGACTGAAACGATATGGAGTAACCTGCAGT
TTTTGACCCGCAAAATTGAGGACGGTAAAAGCGCTGATTTACTGTTTTCC
TCAGTCAATCAGGATCTAGACAAATCAGAAGCTAACCGTCTCCGTCACCG
AAAAACTCATACATATATATACTCGCTAATAACCTTACTTAGGGTACCAA
ATAAATCAATCCTTACGGGGAAGCTATTAAGCATAAAATATAATGAGGTA
TCTTTAATGAACTGTTTCCTTCATCTCATTTTCTTCCCCACCACAAGACA
ATTAAATTCTTTTCCATACTAATCTAATGCTTACTTTTCATATTGACCAC
TCATTTATTGAGCAAGTTCCTCTATCTAAAACGAGTCTGCTAAATTACGT
GGGTTACGTGCGTGTCGTGGGTTCGTGGGTCCGTGCCCTCGTGGGTGTTC
GTGGGTTAAAATATCTCGTGGGTTCGTGGGTCAAAATATCTCGTGGGTTC
GTGAGTTCGTGGGTCCAAAAAAAAATCACGTGGGTTGAAATTGCTCGTGG
GTCCAAAAAAATCACGTGGGTTAAAAAATTCTAATAATTTTCCAAAAACA
AAAATTCATATGGGTTATCGGGTATTTTTTAGAGTAGTCGAAAACGCTAT
CTACGACCTATAGTAAAGCAACACCCACGAGGGCACGAACCCACAACACG
CACGACACGCACGTAACCCACGTAATTTAGCAGACTCATCTAAAACCAAG
CTCTTTGCCTTGGTAAAGCATTCAATTTCGAGTACAGTGGAGTCTCTTTA
CTTCTGTAATATGAATGTTTACTTAACTTGAACACGTTTTCTAGTCCCTT
CAACTAAAAATGCCTCATAAACCTTACTCAATAACTCGAAATTCCCTCAA
CTCGTACAAATTTGTGTTCCATGTGCGTGTTCGAGTTATTGAGAGTATTG
TATAAAAAATCTGATTTTTAAAAAATCAAAACTTTATAGCTGAAGAGTAC
GACTTAAGTGTTTCGGCTTTTACCCCTAAGAAATTCTGATTAAGCTCTAA
CTCTATCGAGATTTTTGAACGCAATCATTGACAATCCATCATTTGCGACA
GGGAATCTTCAGATGTTGTTCCAAAAAAGGTTGGACTGTTAACTTATGAA
GGAAACTAAGAGTCGACACCCAGAAAAAGTAGAAATGTAAAAATGAAGTA
TAATCAATTCTCTTTCTCTCTAATTCGAATATTTCTGTAATTCGGACTAA
AATATTGGTCCCCCTCAGCTTTCATAGTCGCATAAAATCAATTCAATCTT
CAATTCTATTTGTCCCTGGAAGATCGAATTAGAGAGAGAGTCGATTACTA
ATTGTTAAACTGAATAGCATAAGATTTCCATGGCTACCATTAGAGGTCGT
CAAGGAAATCTTTGCATGCGATCTGAGAGTAATGTAAATGCAAATCAACT
CATGCAACTGATAAAATCATAACGTCTATTCTTAAAAGGTTTTTTAACGG
ATTGACCTATTGAGTGGCGTAGGCTTTGCACTGAATAAAGGAATACCTTA
AGGGAAGTAATTTTGACGGGGAGGAAATTTGGCAGATTTTGTCAAAATCC
ACCAAATTAAGTTCCTGCGAAATTAGATTTTCAAGCCGTCCGCCAAATTA
AATTCTCTCTGTCTGGAAAACTTTTTCCGCCATCCCAGCTGGCACACAAC
GTTGTTTCAACATTCATCTAACGTTATATGGAAGTTGCGAACGTTAGATA
AACGTCAAAAAAACGTCGTGTTCCAGCTGGGATCCGCCAAATTAAATTCC
CGCCAAAATTTCTTCCCTTAAATGCCCAATAATGTAACCAATAATGTAAC
CAATCGAATTAATCTAATTTTAGAACACCAATGATAAAAACTCTTTTTAA
ATCGGCAAAATAAAACAGTGGATTCGCGGTTATTAGAACCTTTCTTTGAA
TTTTTCTATGATTGAGACCAATTTACAGTTTGCAAAAGAATTCTGAATCG
TGCAAACTATAGTTATAGTTTTTTAGTGATCCTTTTCATTGTAATGTAAG
TAGAGTGTAATATATCAATCGATCTGTAGTGTAAATGAGCAAAGCTTCAT
CATCAACTTAAGTATTATTTTCAATAATCCATAATAATAATTCCAATTTT
AGGTTTCAATTGGTGAAACATCTTGCAAATGTGGACACGTTTTACGCGAA
GCTCTCACGTTAAAGGAAGGTAAGTTTTACTAGGCAAAAAGAGCTATAAT
ATTATTAAATACATCTTTTCGACCGTAGCCACCAATTGCCGCGTGTTCAT
TTTTTTGTCTGTTTTACCACCCTAAAACCGTCCCAGTCTTTTTTTTGCAC
CTATAGACTATAGAAAAAGGTGTAAAAAAAGGACTGGATCGAGTTTAGGG
GGATAATTAAATAATGAAGTGCCACGCGCCTGACTGCGCGACTACGGTCG
AAAAGGTGTATTATTCGCCTGATATATGCAAGCATACTTGTAAATAAGGC
TATAAGCCTGAAATCGCGAAATTTTGTTTTTAAAATAATGTTATTTGATT
TTACTGAATTTGACTTTTTTTTTTACTGTGTATGTCGGAGGGAAATAGCT
ATTTTCTTCCCAGCTGGCACACAACATTGTTTCAACGTTGATTTATCGTT
ATATGGACGTTGTGAACGGTAGATAAACGTTGAAACAATGTTGTGTGCCA
GCTGGGTTTCGGAAAGGTGGGTTTCTGTCTTCATCAACAGATCGTTTAGC
ATTTTCATATTAATGTTTTTCTATCTTTTTTTCTCAGAGCAAACCTCTCG
CAAACGAAGAGCTGTCTACCGACCTAATTCCGTCAGTTCAGAATGGATTT
CTATGAAAGAAAAGTCAGAACTGAAGATGGCTTTGAAGAAGGTTTGTAGA
TGGTTATTAAAGCTCTCAGATATTTGGCTTTTGGCTCTTTGAGCACTCTA
TAGACTCGCTCGCTACAAGAGACTGTAAAGTTCAACACTTAGTGATCAAC
TGCATCAGTCTATGCTCACAGACACGTATTCCGTCCTTCCAAGGAACAGA
ATACCTTAGAAGGACGGAATACCTGTCTACGGATAGATGTTATAATTCGT
GTACTTTATTTAATAAGTTCTTCTTCTAACCCCCTTCGGGTCTTTAATCT
TAATCTCGCATACTCCCTTTCTTTTTTTTACAGTCCAAACTTGAGAATGG
TCATCAAAATATCACACACATCGGTCACGGCAACACAACCACCAATAACG
CCTCCGTCACGCCCCTCCAAAATAACACAACAAACAACAAAAGCAACCCT
CTCAACGACGCTAATAACAACAGCTGCACGGTGGCGGTGACGTCAGCGCC
AACAATTCCACGCCCCGTCGGCCGCCCACGTAAAAATGGAAGCACATTCA
ACAACCGTAAAAAATCAACAAAACAAACATCCGCTAACGCCGTCTTCAAT
AGCACAGCCCCGATCAGTAATAGTAGCCAAATCACCAAGAATAACGAAAA
TGCACTCACCAACAACACTAAAGAAAACACTGACAAACAAAACAAACTAA
GAGGGCTTCTAGAAATGATTGAAAACTCTTACCAAAACATTTACTTCAAT
AAATGCAAAAGTTACAAGAAAGCTAAACTAGCTGATTTGGAATTTGAATT
TGACTTTTCGGCTTTCGATAGTCACAATCCCTATTATCCATCAGCGCTGG
AAGACATTAACACAAAAATCAACAAAACCAATAGTTTTTGGAAAAGCCTA
CATTGATAATTGAATGAGATGAATTCTGGGGGTTTTAAAGAATGTGGCCA
AGCAATGTGGTTCCTACTGGTCACTGAAGTTTTAATGAAAAAACGAAAAT
GATGAAAAAAAGAAAACTTTGCTTGTATATGTTGGCTAATGTACTTCTTC
TAATCAGAAAATACTTTTGGGAGCATCTGCAGATGGTCAAATTAGATATA
AAGACATTGTTTAAAATGTCGCATGTGATTGGTGCATTATAGTGTTTAAA
ATTGTCGCATTTTAATATGCGCATATACGGGTCACGTGGTATGGTCACGT
GATGTTTTCGTGGTTGGTGGTTGGTTGCTGTTTAAAACGTATCCTTGTTT
ATTATGATATTTCAAATTGAATGTTTGAATTTTTTAATGATATCAATGTT
TGGTAAATTGATACTACCCACAATTAAAATAAGCTCTGAATGATTTTCTA
TTCTATGTCACCCGAATAAAGGCGATAATCTGAGAGAGGTCACTAGAGAA
TGTTTTCAGGCTAGGTAAAGTTTGCATAATTTTCGCCATTATGTAAGAAA
ATTCTTCAAATTTGGATATTTTCTTCAATTGTGGTATATTTCCCTTCTTC
TCTTCTATTTCTAAGTTACATAACCTAACCATACCAAACCTGATCGATCT
CTATTATAAAGCCAAACCCGGTATTGCTAAAATGCTCTTTTTAACCCTTT
CTGTGCCGCTGTCGGCATATGCCGACTAGAGCATTTTCGATTTCTTTGCC
GGTGTCGGTATTTGCCGACAAGAGAGATCTCGACCTATTTGCCAGAGGTT
TTTTTAAGTTTGTTGAACGTTCAATCTTGAACTATATTTCATTAAATAGC
ACAGTTGAATAATTAAAATATATTTTAAAGATGTTTTTCATAATTATACA
TTTTTCAACTCAAAGTAAACACATATCACTTATATTTCTGATATTTTTCA
GAAAATAAAGCTAAATGTGATGGTAAACTTCTGTGGTCGCTCATGTCGGG
ATATGTCGACATCTGGCAAATAGGTCGAACCTATGGAACGGCAGTTGGTT
AAGGTGACTTTTATTGTATGGTCTACATTTTTAATGTCGGTTAAAAGAAG
CTCCCGCGAGATTTTATAAACGGGTAAATCAGTGACTTTTATATTTGCTG
AAAATTGAACCCCGTAAAGATTTTAAGTTTAACTGGTTGATTGGTTTGCT
TTGGTTTAGTTTAATTGAGTTTAATAATACATCTTCTAAAGCCTTAGCAA
TTGATCTGCACACGAGTCGACTTTAAATAAACGCAACTTTAAGAGGCTGA
AAAAAGTACGCGAAAAAAAAATTACAAAAGAAG

Coding sequence (CDS) from alignment at scaffold_102:166875..174757-

>TCONS_00045874 ID=TCONS_00045874|Name=TCONS_00045874|organism=Clytia hemisphaerica|type=CDS|length=4320bp|location=Sequence derived from alignment at scaffold_102:166875..174757- (Clytia hemisphaerica)
TCCAAACTTGAGAATGGTCATCAAAATATCACACACATCGGTCACGGCAA
CACAACCACCAATAACGCCTCCGTCACGCCCCTCCAAAATAACACAACAA
ACAACAAAAGCAACCCTCTCAACGACGCTAATAACAACAGCTGCACGGTG
GCGGTGACGTCAGCGCCAACAATTCCACGCCCCGTCGGCCGCCCACGTAA
AAATGGAAGCACATTCAACAACCGTAAAAAATCAACAAAACAAACATCCG
CTAACGCCGTCTTCAATAGCACAGCCCCGATCAGTAATAGTAGCCAAATC
ACCAAGAATAACGAAAATGCACTCACCAACAACACTAAAGAAAACACTGA
CAAACAAAACAAACTAAGAGGGCTTCTAGAAATGATTGAAAACTCTTACC
AAAACATTTACTTCAATAAATGCAAAAGTTACAAGAAAGCTAAACTAGCT
GATTTGGAATTTGAATTTGACTTTTCGGCTTTCGATAGTCACAATCCCTA
TTATCCATCAGCGCTGGAAGACATTAACACAAAAATCAACAAAACCAATA
GTTTTTGGAAAAGCCTACATTGAAGCAAACCTCTCGCAAACGAAGAGCTG
TCTACCGACCTAATTCCGTCAGTTCAGAATGGATTTCTATGAAAGAAAAG
TCAGAACTGAAGATGGCTTTGAAGAAGGTTTCAATTGGTGAAACATCTTG
CAAATGTGGACACGTTTTACGCGAAGCTCTCACGTTAAAGGAAGGAGTTA
AATATTCACACAAAACACGAAGTTACACAGACAGACAGAACATGACCAAG
AACAATGAAATGCAATTATGTGTAGCATGCAATAAGCTTATGCAAGGGTC
GCTATTTTTTCAAGTCCAAACTTGAGAATGGTCATCAAAATATCACACAC
ATCGGTCACGGCAACACAACCACCAATAACGCCTCCGTCACGCCCCTCCA
AAATAACACAACAAACAACAAAAGCAACCCTCTCAACGACGCTAATAACA
ACAGCTGCACGGTGGCGGTGACGTCAGCGCCAACAATTCCACGCCCCGTC
GGCCGCCCACGTAAAAATGGAAGCACATTCAACAACCGTAAAAAATCAAC
AAAACAAACATCCGCTAACGCCGTCTTCAATAGCACAGCCCCGATCAGTA
ATAGTAGCCAAATCACCAAGAATAACGAAAATGCACTCACCAACAACACT
AAAGAAAACACTGACAAACAAAACAAACTAAGAGGGCTTCTAGAAATGAT
TGAAAACTCTTACCAAAACATTTACTTCAATAAATGCAAAAGTTACAAGA
AAGCTAAACTAGCTGATTTGGAATTTGAATTTGACTTTTCGGCTTTCGAT
AGTCACAATCCCTATTATCCATCAGCGCTGGAAGACATTAACACAAAAAT
CAACAAAACCAATAGTTTTTGGAAAAGCCTACATTGAAGCAAACCTCTCG
CAAACGAAGAGCTGTCTACCGACCTAATTCCGTCAGTTCAGAATGGATTT
CTATGAAAGAAAAGTCAGAACTGAAGATGGCTTTGAAGAAGGTTTCAATT
GGTGAAACATCTTGCAAATGTGGACACGTTTTACGCGAAGCTCTCACGTT
AAAGGAAGGAGTTAAATATTCACACAAAACACGAAGTTACACAGACAGAC
AGAACATGACCAAGAACAATGAAATGCAATTATGTGTAGCATGCAATAAG
CTTATGCAAGGGTCGCTATTTTTTCAAGTCCAAACTTGAGAATGGTCATC
AAAATATCACACACATCGGTCACGGCAACACAACCACCAATAACGCCTCC
GTCACGCCCCTCCAAAATAACACAACAAACAACAAAAGCAACCCTCTCAA
CGACGCTAATAACAACAGCTGCACGGTGGCGGTGACGTCAGCGCCAACAA
TTCCACGCCCCGTCGGCCGCCCACGTAAAAATGGAAGCACATTCAACAAC
CGTAAAAAATCAACAAAACAAACATCCGCTAACGCCGTCTTCAATAGCAC
AGCCCCGATCAGTAATAGTAGCCAAATCACCAAGAATAACGAAAATGCAC
TCACCAACAACACTAAAGAAAACACTGACAAACAAAACAAACTAAGAGGG
CTTCTAGAAATGATTGAAAACTCTTACCAAAACATTTACTTCAATAAATG
CAAAAGTTACAAGAAAGCTAAACTAGCTGATTTGGAATTTGAATTTGACT
TTTCGGCTTTCGATAGTCACAATCCCTATTATCCATCAGCGCTGGAAGAC
ATTAACACAAAAATCAACAAAACCAATAGTTTTTGGAAAAGCCTACATTG
AAGCAAACCTCTCGCAAACGAAGAGCTGTCTACCGACCTAATTCCGTCAG
TTCAGAATGGATTTCTATGAAAGAAAAGTCAGAACTGAAGATGGCTTTGA
AGAAGGTTTCAATTGGTGAAACATCTTGCAAATGTGGACACGTTTTACGC
GAAGCTCTCACGTTAAAGGAAGGAGTTAAATATTCACACAAAACACGAAG
TTACACAGACAGACAGAACATGACCAAGAACAATGAAATGCAATTATGTG
TAGCATGCAATAAGCTTATGCAAGGGTCGCTATTTTTTCAAGTCCAAACT
TGAGAATGGTCATCAAAATATCACACACATCGGTCACGGCAACACAACCA
CCAATAACGCCTCCGTCACGCCCCTCCAAAATAACACAACAAACAACAAA
AGCAACCCTCTCAACGACGCTAATAACAACAGCTGCACGGTGGCGGTGAC
GTCAGCGCCAACAATTCCACGCCCCGTCGGCCGCCCACGTAAAAATGGAA
GCACATTCAACAACCGTAAAAAATCAACAAAACAAACATCCGCTAACGCC
GTCTTCAATAGCACAGCCCCGATCAGTAATAGTAGCCAAATCACCAAGAA
TAACGAAAATGCACTCACCAACAACACTAAAGAAAACACTGACAAACAAA
ACAAACTAAGAGGGCTTCTAGAAATGATTGAAAACTCTTACCAAAACATT
TACTTCAATAAATGCAAAAGTTACAAGAAAGCTAAACTAGCTGATTTGGA
ATTTGAATTTGACTTTTCGGCTTTCGATAGTCACAATCCCTATTATCCAT
CAGCGCTGGAAGACATTAACACAAAAATCAACAAAACCAATAGTTTTTGG
AAAAGCCTACATTGAAGCAAACCTCTCGCAAACGAAGAGCTGTCTACCGA
CCTAATTCCGTCAGTTCAGAATGGATTTCTATGAAAGAAAAGTCAGAACT
GAAGATGGCTTTGAAGAAGGTTTCAATTGGTGAAACATCTTGCAAATGTG
GACACGTTTTACGCGAAGCTCTCACGTTAAAGGAAGGAGTTAAATATTCA
CACAAAACACGAAGTTACACAGACAGACAGAACATGACCAAGAACAATGA
AATGCAATTATGTGTAGCATGCAATAAGCTTATGCAAGGGTCGCTATTTT
TTCAAGTCCAAACTTGAGAATGGTCATCAAAATATCACACACATCGGTCA
CGGCAACACAACCACCAATAACGCCTCCGTCACGCCCCTCCAAAATAACA
CAACAAACAACAAAAGCAACCCTCTCAACGACGCTAATAACAACAGCTGC
ACGGTGGCGGTGACGTCAGCGCCAACAATTCCACGCCCCGTCGGCCGCCC
ACGTAAAAATGGAAGCACATTCAACAACCGTAAAAAATCAACAAAACAAA
CATCCGCTAACGCCGTCTTCAATAGCACAGCCCCGATCAGTAATAGTAGC
CAAATCACCAAGAATAACGAAAATGCACTCACCAACAACACTAAAGAAAA
CACTGACAAACAAAACAAACTAAGAGGGCTTCTAGAAATGATTGAAAACT
CTTACCAAAACATTTACTTCAATAAATGCAAAAGTTACAAGAAAGCTAAA
CTAGCTGATTTGGAATTTGAATTTGACTTTTCGGCTTTCGATAGTCACAA
TCCCTATTATCCATCAGCGCTGGAAGACATTAACACAAAAATCAACAAAA
CCAATAGTTTTTGGAAAAGCCTACATTGAAGCAAACCTCTCGCAAACGAA
GAGCTGTCTACCGACCTAATTCCGTCAGTTCAGAATGGATTTCTATGAAA
GAAAAGTCAGAACTGAAGATGGCTTTGAAGAAGGTTTCAATTGGTGAAAC
ATCTTGCAAATGTGGACACGTTTTACGCGAAGCTCTCACGTTAAAGGAAG
GAGTTAAATATTCACACAAAACACGAAGTTACACAGACAGACAGAACATG
ACCAAGAACAATGAAATGCAATTATGTGTAGCATGCAATAAGCTTATGCA
AGGGTCGCTATTTTTTCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029315XLOC_029315Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045874-exon-scaffold_102-1575043694:174619..174757TCONS_00045874-exon-scaffold_102-1575043694:174619..174757Clytia hemisphaericaexon
TCONS_00045874-exon-scaffold_102-1575043694:173925..174019TCONS_00045874-exon-scaffold_102-1575043694:173925..174019Clytia hemisphaericaexon
TCONS_00045874-exon-scaffold_102-1575043694:169739..169805TCONS_00045874-exon-scaffold_102-1575043694:169739..169805Clytia hemisphaericaexon
TCONS_00045874-exon-scaffold_102-1575043694:169067..169170TCONS_00045874-exon-scaffold_102-1575043694:169067..169170Clytia hemisphaericaexon
TCONS_00045874-exon-scaffold_102-1575043694:166875..168774TCONS_00045874-exon-scaffold_102-1575043694:166875..168774Clytia hemisphaericaexon
TCONS_00045874-exon-scaffold_102-1510915933:174619..174757TCONS_00045874-exon-scaffold_102-1510915933:174619..174757Clytia hemisphaericaexon
TCONS_00045874-exon-scaffold_102-1510915933:173925..174019TCONS_00045874-exon-scaffold_102-1510915933:173925..174019Clytia hemisphaericaexon
TCONS_00045874-exon-scaffold_102-1510915933:169739..169805TCONS_00045874-exon-scaffold_102-1510915933:169739..169805Clytia hemisphaericaexon
TCONS_00045874-exon-scaffold_102-1510915933:169067..169170TCONS_00045874-exon-scaffold_102-1510915933:169067..169170Clytia hemisphaericaexon
TCONS_00045874-exon-scaffold_102-1510915933:166875..168774TCONS_00045874-exon-scaffold_102-1510915933:166875..168774Clytia hemisphaericaexon
TCONS_00045874-exon-scaffold_102-1491911889:174619..174757TCONS_00045874-exon-scaffold_102-1491911889:174619..174757Clytia hemisphaericaexon
TCONS_00045874-exon-scaffold_102-1491911889:173925..174019TCONS_00045874-exon-scaffold_102-1491911889:173925..174019Clytia hemisphaericaexon
TCONS_00045874-exon-scaffold_102-1491911889:169739..169805TCONS_00045874-exon-scaffold_102-1491911889:169739..169805Clytia hemisphaericaexon
TCONS_00045874-exon-scaffold_102-1491911889:169067..169170TCONS_00045874-exon-scaffold_102-1491911889:169067..169170Clytia hemisphaericaexon
TCONS_00045874-exon-scaffold_102-1491911889:166875..168774TCONS_00045874-exon-scaffold_102-1491911889:166875..168774Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045874-proteinTCONS_00045874-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:166875..174757 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.183038	0	0.296886	0.405315	0.733981	0.00390203	5.71683	1.35745	2.48563	2.93186	1.85464	2.81683	5.42374	0.519666	1.10646	2.26177	3.67273	9.50844	5.4682	3.02531	2.08385	0	0	2.32139	2.60615e-05	4.06624	0.00960015	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045874 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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