TCONS_00045749 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045749
Unique NameTCONS_00045749
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length897

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045749 ID=TCONS_00045749|Name=TCONS_00045749|organism=Clytia hemisphaerica|type=transcript|length=897bp
CAAAATCGTTTGATTCGACTAAGCGAAGAGAACTACACTCAATTTATCGA
GACCCAATTCCAAGCAGTTACACAAACAGACGAAAATGATTTGCTGGAGC
TTTTGTTAAATATACGTCATCACAACGATAATAATATGCAAACTCTTTTT
TTCGTGGTTCATATGTTTGGAATGAGGTCGTATTATAATTATTTTAGAAT
GATCCAGCAAGCTCAAAACATGTACGAGCAAAAACAAATCGACGTTGTGG
TATGGAGTTTAACAAACTTGGTCTATGAAACATTTTGGAATTGGCTACCA
AAACAAAACCGTGTAGTAGATGAAATGGGATGGTCACCTTCATTCGACCC
ACACTTGCATCGAATACTAATGGATCTTATGTCCAATCCACAGTACGACT
GGCAAAAAAGGTACACACGTAATGTTAATGTAACATGTCGAACGTCAAAA
CGGATTAATTTGTACTTTTGGTATACAGATGATAATGATAGTAATCGTGT
GCCTAGCAACAAAATTTGGaatgatgtttttgaaaatttatctttGAATG
CAACATTTAACCGTATCTTTGAACCATacaattattcgttttataatcTC
CACCCACAAAAGTTCTCATCAGTCAACAGACAAATTCATTAAAGAAatga
aagaagaagaacaaaagGATGACATCATTGTTATCCACTTACCAATTACT
AAAAGTCAAAATTATAATGGTCCACCTTCATTACCAATGAAATTTAACAA
AGAGAACACAATCCATATACATGAAACCCTTACTACCCTTGAAGACACTC
CTCAACTTCGAAAAGGATCGTCTATGAACTATATCATGATACAAGAAAAC
GATTATTTTAACCCCCTGTTTTTTGAATTGGTTATTCAGCAAGTAAA
Run BLAST on NCBI

protein sequence of TCONS_00045749-protein

>TCONS_00045749-protein ID=TCONS_00045749-protein|Name=TCONS_00045749-protein|organism=Clytia hemisphaerica|type=polypeptide|length=213bp
QNRLIRLSEENYTQFIETQFQAVTQTDENDLLELLLNIRHHNDNNMQTLF
FVVHMFGMRSYYNYFRMIQQAQNMYEQKQIDVVVWSLTNLVYETFWNWLP
KQNRVVDEMGWSPSFDPHLHRILMDLMSNPQYDWQKRYTRNVNVTCRTSK
RINLYFWYTDDNDSNRVPSNKIWNDVFENLSLNATFNRIFEPYNYSFYNL
HPQKFSSVNRQIH
Run BLAST on NCBI

transcript from alignment at scaffold_100:721773..736834-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045749 ID=TCONS_00045749|Name=TCONS_00045749|organism=Clytia hemisphaerica|type=transcript|length=15062bp|location=Sequence derived from alignment at scaffold_100:721773..736834- (Clytia hemisphaerica)
CAAAATCGTTTGATTCGACTAAGCGAAGAGAACTACACTCAATTTATCGA GACCCAATTCCAAGCAGTTACACAAACAGACGAAAATGATTTGCTGGAGC TTTTGTTAAATATACGTCATCACAACGATAATAATATGCAAACTCTTTTT TTCGTGGTTCATATGTTTGGAATGAGGTCGTATTATAATTATTTTAGAAT GATCCAGCAAGCTCAAAACATGTACGAGCAAAAACAAATCGACGTTGTGG TATGGAGTTTAACAAACTTGGTCTATGAAACATTTTGGAATTGGCTACCA AAACAAAACCGTGTAGTAGATGAAATGGGATGGTCACCTTCATTCGACCC ACACTTGCATCGAATACTAATGGATCTTATGTCCAATCCACAGTACGACT GGCAAAAAAGGTACACACGTAATGTTAATGTAACATGTCGAACGTCAAAA CGGATTAATTTGTACTTTTGGTATACAGATGATAATGATAGTAATCGTGT GCCTAGCAACAAAATTTGGAATGATGTTTTTGAAAATTTATCTTTGAATG CAACATTTAACCGTATCTTTGAACCATACAATTATTCGTTTTATAATCTC CACCCACAAAAGTTCTCATCAGTCAACAGACAAATTCATTAAAGAAATGA AAGAAGAAGAACAAAAGGATGACATCATTGTTATCCACTTACCAATTACT ATAAGTCAAAGTTATAATGGTCCACCTTCATCACCAATGAAATTTAACAA AGAAAACACAATCCATATATATGAAACCCTTACTACCCTTGAAAACACTC CTCAACTTCGAAAAGGATCGTCTATGAACTATATCATGATACAAGAGGAC GATTATTTTAATCCCCTGTTTTTTGAATTGGTTATTCAGCAAGTAAATCG TATATTATGTGAAATGAACTAGACTATTTCTCGCTTATTCGAATTTTCAT TAATTCGAACCAATTGTTATAAGTTCCCGTTAAGCGTAAACCCTTGTAAA ATACTATATTTCGAACTTCGAACAAATTGAACTTCGAATTAACGAGAGTC AACTGTATTTATTGGTGATTATTATGGATTTATTAGTAATAGAGACAGTC TCCAAATTATTGTCATACAAGAACATTGTAAACTATTTTTTTATAAGAAC TAGTAAATTTTAGTTGAGACTCGGCTGTTCTCATTTCTTTTGTCTTAAAT TGTTCTTATCCAGTCCAGTTAATACGGACGTGTTCTACGATCAATGCCAT AAACATATTGGCACTTTTGGCTAATTTACCATTTTTCGAAAATTAAAGTT CGAGCGAGAATGTCGCTTTCGGGCCTTCATCTTGATTTCTGGGAGGGATT TATTGGTTTCTAGGCTATATTTCAAGCCCTACTGGACCATTTTTGAACTT TTTGGATCCTCAGATCCAAAGCGTTAAAACTAAGAGTTAAAACTCTACCC TTCGAACCTACTTTAGAGCACTTACAAATCGATTGGTTTCAAAACTTCCC GGTGGATTTCCATTTTGTGCCAAGTATTTTGTCACCGATTCTAGGTTTAA TATCCTGACTTTACTAATTTTACTTTCAATTTTCTTAAAACGCAGCTAAT CGAGGCTCCGCATTATCTTTTTAGCATTTCTTATAAAAAAAATGCATTTG AAGTCGTTGAAGGGACATAAAGTGCACGAAAAGCGTATCATATAACAAAA TGCAGTGGAGTTTCCATAGATCGAACACTTAGGGGGTAATCAAATTTGTC TGAGCAGAGAGATGGGTTGAGAAAATTTCGAAATATGGAGTAAGGTTTGT TAAGCATTGTTAACTAAAGGGACGAGAAAACTTGTTAAGTGAGTTAAGTG AGCACTGCTTCTTACTTAAATTCAATCAAAACTGTTGTTATCTTTCAAGG TTAAAAAGGCTAAAAATGTTTAGTTTACATCTTTATTTTACAGTTTTTCA CAGTTTTTCGCGATATAGGGTACGTTATATCTTCCTTCGTTTCGAAAAAA CTCCTACTCTCCGGGATATGCGCAATGCTCTTGTTTTGAATATGGAATTT CTCCGGATACATCGCTACATCGGATATTATGTTTAATCCTATGGTATTTA AAAAGCGAATTCCCGTTTGGGCTCACTAGTTGCCACCTATATCAGTGCCT ATAGACCAAGAGTAAAACCTAAAAGACTGGAGCTGTCGACTGTGTAGACT ACTTGCCTAAGTCTCCCAAAAAGTCGATTTGAGATTCATTATAAAACATG AGTTGTTTCTCCTTTTCAAGGTATTTATTGACAAAAAAGAGCTTTTCTCC ATTTTGTCCGTAATCGTCTATTTTAAAGAGATATACTACTATAGCCAAAT TTGGATGTCAAATTGGGGGTACCTAACGTTTTCAACTGACCCATATTGTG ATTTGTAGACGATTTCTTGACAATGAAGTACTTTTACTTGTTGCAGGTGT TTTTCAGAGAGTGATTTATCAGTTAAAGTTCAAAAATGTTTTCTCTACGT TTTTTTCTGCGGGGAAAGTACACGCTTTTTTTTATAAGAATACACTTTAT AAGAATGTCCATGATGAAAATGGCCTAAAAAATTAAGAATATGGTAAGAA TATCACCATCATGGAATTTAGCAATTGAACTTAAGAATGCCATTTTTAAT GCATTTTAACCTGTAGATTGCCAATTTCGATCTTAACCTAAGAATACCGT AAGAATATTTTTGGGATGATTTTCGCCAAAAAGTTATGAATATCCATGAT GAAATGAAAAAACACCATTCTTATCTTATAAAAAGAAAAGCGTGTACTTT TTATTGTTTCAGGTACTTTCCAAAGCGTAATTATTGATCAAAGTTCAAAA CTTTTACTCTACATTTTTTTGCGGGGAAAGTACTTTTTGGACCTACCTCC GGGTACCCCGGTGGAGGTCCTTTAAATTAACCCATGTCCGTTCGTTCGTC CGTTCCTCCGTTCGTTCGTCTGTTGCCAGCTTTTCTCGGGATTGACTCAT TAGTTTTTTCAGATTTTTTGCACAATGATGCAAAATGGCAATGCCCAAAA TGTGACAGAGCCCGATTTTCATAAAAAAAAATTTCCGGCCGAAAATGCCG GAAATATCCCAGAAAAACTGGATTTTTGGCACTTTCTCCAGATTTTATCA TTAGTTTTTTCTGATTTTTTGCTCATAGATGCGTATTAACAATGCCCAAA ACATGGCCGAGTCCGATTTTCGAGCAAAAATTTTTTCCGGCCGAATATGC CGGAAATATGCCGGAAATCGCCGTTTTTCTGGATTTTCATTGGACTTATT CCTTATAATTGGTTGTTTTTTCATTCAAAAACATTATTAATAGCAATGCC CACCATCAAGCAAGTTTCAATTTTCAATAAAATTGATTTTTGAAGCCGGA ACTATTTAAAAATCGCCGGGACAACCTATTTTCGCCGGAAACACAGTATT TCTTGAATTTCTCGAGCTGTACTTTATATTTTTTTATGAAATTTTGCACA CTGATGCAAAATGACAATACCTAAAATGTGATGGAGCGAGATTTTCGAAA AACATTTTTTTCCAGCCGAAAATGCCGGAAATACGCCGGAAAAACTGGTT TTTTGACATTTTCTCGAGATTTTATCATTAGTATTTTCTGATTTTTTGCT CAAAGATGCGTAATAACAATGCTTAAAAAATGGCCGAGTCCGATTTTTAA GAACAATTTTTTTCCGGCCAAAAAAGCCGGAAATTTCCGTTTTTGCATAT TTTCATTGGATTTTTTCGTTTCATGTCTTGTTTTTTTCAAACAAAAACAT CATTTATAAGAATGTCCACGATTAAGCATGGTTCAATTTTCAATGAAACT GATTTTGGTACAGGAACTTTCTAAAAATCGCCAGTACAGCCGAGAATCGC CGGATTCCATGAATTTCTCGATTTGTTCTCGTATTATTCTGCATTTTCAT ACTATTGTTCTCATTTTTCAATTCTCTTTTTACATCAATCTTCAGGTAGG TCCATTCAGCATGTACCTTGTTATTGTTTGTTTCATGTACTTTCCAGGGA CTTTCCAAAGGGTAATTATTGATCAAAGTCCAAAACGTTTACTCTACGTT TTTTTGCTGACTCAGTTCTATTTTTGATTTTTAATGAGAAACGTTTTGAT TACGATCTGGAAGCTAGTGTTTTTTCTATGAGTTTTCTTGAAATGTCAAA ATGGGGCCTCATTGTTCTTACCAAATTTTCTAATGGAAAAAGAGCGTAAG TAGAAATCAATTAGTTGAATCGTGGATGCAATTAACTTTGGCTTTAGAGA TAGCTGAAAGAATAGAATTTTTAATCTTTGTAATCTATAAAAACCTAATC AACTTTTAACTTCGTTGATATATATTATCTCTTTAATAGTCTCAAGTGAG TACGCTGTGGCTCTACAAGAGCTTTCTTTCGAAACTTTAAAAAGTATTCA AATGATAATGTATAGGTCGATACCAATTAGCCTCCGTCTCGGAAGAGGAC TGGGCCCGAATTTGCGGACGTTTTCACAGTTTCACTTTCGTTTTCGGCTA TACGACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCA TGAGATATATGAGTCAACAAATCAAACAAAAACCAACAAATCATGTCTCT TCACTTTCATGTCACATCGTGTTTATATGGGGTATCAGAAAGCCAATCCA CTAGAAGAGCCATCTTCCTTTATTATGGAGTGTTCCAAAACTATTGGTAG GTTGTTTGGAAGTAAAGAAACCCACACAGTTTGTTCTATTTTAAAGATTT AACTTGAAAACAAACTGCATCTTTCCAGCAGAAACTCATGTTTCAACCTG CTACATAACATTGGTCAGTCGGGTCTGCTACTAACATGNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NCTTGAATCATGATACATTACTCACATTTCACTGGATGCATTTTCGCTGT GAAATTATCCGCAAAATTTTCTGACCGCGTTCTGAGACGGAGGCTAATGG CTGGTGCATCAATATGTTTTCTTTGCTTTATCGTTTGTATGCCAGTATCG ATGGCTTTTCGACAAACGATTGCAACATGCTTTGAAGTCAGGAATGTCAG TATTATTCCATATGTAGATGCCCCAGGCTCCGCATTGCAAGATTCTACTG TGCAGTTGAGATATTTGGTCAAGTCAATGCTGTATGAACCCTGTTTTATA GTTTGGGCTTTCTCACCGGTACAAAATCGTTTGATTCGACTAAGCGAAGA GAACTACACTCAATTTATCGAGACCCAATTCCAAGCAGTTACGCAAACAG ACGAAAATGATTTGCTGGAGCTTTTGTTAAATATACGTCATCACAACGAT AATAATATGCAAACTCTTTTTTTCGTGTTCAATATATACAGCTATTTTGA TCATATTAAAATGATCCAGCAAGCTCAAAACATGTACGAGCAAAAACAAA TCGACGTTGTGGTATGGAGTTTAAAAAACCGTTTCTATAAAATATTTTGG AATTGGCTACCAAAACAAAACCTTGTAGTAGATGTTATCACTGGGTCACC TCCGTTCGACCCACACTTGCATCGAATACTAATGGATCTTATGTCCAATC CACAATACGACTGGCAAAAAAGGTACACACGAAATACTAATGTCACATGT CGAACGTCAAAACGGATTAATTTTTACTTTTGGTATATACATAATAATGA TCGTGTGCCTAGCAACAAAATTTGGAATGATATTTTTGAAAATTTATCTT TGAATGCAACATTTAACCGTATCTATGTCTTTGGACCATACGATTATTAT TATATATTCCCCACCCACAAAAGTTCTCAGTTAACATACAAATTCATTAA AGAAATGAAAGAAGAAGAACAAAAGGATGACATCATTGTTATCCACTTAC CAATTACTATGAGTCAAAGTTATAATGTTCCACCCTCATCACCAATGAAA TTTAACAAAGAAAACACAATCCATATATATGAAACCCTTACTACCCTTGA AGACACTCCTCAACTTCGAAAAGGATCGTCTATGAACTATATCATGATAC AAGAGGACGATTATTTTAACCCCCTGTTTTTTGAATTGGTTATTCAACAA GTAAACCGTATATTATGTGAAATGAACTAGACTATTTCTCGCTAATTCGA ATTTTCATTAATTCGAACCAATTGTTATAAGTTCCCGTTAAGTGTAAACC CTTGTAAAATACTATATTTCGAACTTCGAACAAATTGAACTTCCCTTTCA AGCTCGAATTAGCGAGAGTCAACCGTGTTTATTGGTGATTCTTATGGGTT TATTAGTAACAGAAACTAATTATTGTCATACAAGAACATTGTAAACTATT TTTTTATAAGAACGAGTAAATTTTAGTTGAGACTCGGCTGTTCTCATTTC TTTTGTCTTAAATTGTTCTTATCCAGTCCAGTTAAAACGGAGGTGTTCTA CAATCAGTGCCATAAACATATTGGCACTTTTTGCTAATTTACCATTTTTC GAAAATTGAAGTTCGAGCGAGAATGTCAATTTCGGGCTTTCAACTTGATT TCATCGGTTATTTCGATCTGGGAGGGATTTATTGGTTTCTAGGCTATATT TCAAGCCCTACTGGACCATTTTTGAACTTTTGGATGCTCAGATCCAAAGC GTTAAAACTAAGAGTTAAAACTCTACCCTTCGAACCTACTTTAGAGCACT TGCAAATCGATTGGTTTCAAAACTTCCCGGTGGATTTCCCTTTTGTGCCA AGTATTTTGTCACCGATTCTAGGTTTAATATCCTGATTTTATTAATTTCA CTTTCAATTTTCTTAAAACGCAGCTAATCGAGGCTCCGCATTATCCTTAA ATTGTTCTTATTTTTTGGCATTTTTTATAAAAAAAGTGCATTTGAAGTCG TTGAAGGGGCATAAAGTACACGAAAAGCGTATCATATAACAAAATGTAGT GGAGTTTCCATAAATCGAACACTTAGGGGGGAATCAAATTTGTCTGAGCA GAGAGATGAGTTGAGAAAATTTCGAAATATGGAGTAAGGTTTGTTAAGCA TTGTTAACTGAAGGGACGAGAAAACTTGTTAAGCGAGTTAAGTGAGCACT GCTTCTTACTTCAATTCAATCAAAACTGTTGTTATCTTTCAAGGTTAAAA AGGCTAAAAATGTTTAGTTTATACATCTTTATTTTACAGTTTTTCACAGT TTTTCGCGATATAGGGTACGTTATATCTTCCTTCGTTTCGAGCGTAAAAC TCCTACTCTTCGGGATATGCGCACTGCCATTGTTTTGAATATGGAATTTC TCCGGATACATCGCTACATCGGATATTATGTTTAATCCTATTTAAAAAGC GAATTCCCGGTTGGGCTCACTAGTTGCCACCCATAACAGTGCCTATAGAC CAAGAGTAAAGCCTAAAAGACTGGAGCTGTCGATTGTGTAGACTACTTGC CTAAAGCTCCCAAAAAGTCTTTGAGCAATTCATTATAAAACATTAGTTGT TTCTCCTTTTCAAGGTATTTATTGACAAAAAAGAGCTTTTCTCCATTTAA TCGTCTATTTAAGAGATATACTACTATAGCCAAATTTGGATGCCAAATTG TGGGTACCTAACGTTTTCAACTGACCCATATTGTGATTTGTAGACGATTT CTTGACAATGAAGTACTTTTACTTGTTGCAGGTGTTTTTCAGAGAGTGAT TTATCAGTTAAAGTTCAAAAATGTTTTCTCTACGTTTTTTCTGCGGGGAA AGTACACGCTTTTTTTATAAGAATACACTTTATAAGAATGTCCATGATGA AAATGGCCAAAAAATTAAGAATATGGTAAGAATATCACCATCATGAAATT TAGCAATTGAACCTAAGAATGCCATTTTTAATGCATTTTAACCTGTAGAT TGCCAATTTCGATCTTAACCTAAGAATATCGTAAGAATATTTTTGGATGA TTTTCGCCAAAAAGTTAAGAATATCCATGATGAAATGAAAAAACACCATT CTTATAAAAAAAAGTGTGTACTTTTTATTGTTTCAGGTACTTTCCAAAGT CGTAATTATTGATCAAAGTCCAAAACGTTTACTCTACGTTTTTTTTGCGG GGAAAGTACTTTTTGGACCTACCTCCGGGTACCCCGGTGGAAGTCCTTTA AATTAACCCATGTACGTTCGTTCGTCCGTTCCTCCGTTCCTCCGTTCGTT CGTCTGTTGTCAGCTTTTCTCGGGATTGGCTCATTAGTTTTTTCAGATTT TTTGCACAATGATGCAAAATGGCAATGCCCAAAATGTGACAGTGCCCGAT TTTCGGAAAAAAAAATTTCCCGGCCGAAAATGCCGGAAATATCCCGGAAA AACTGGATTTTTGGCACTTTCTCGAGATTTTATCATTAGTTTCTTCTGAT TTTTTGCTCATAGATGCGTATTAACAATGCCCAAAACATGGCCGAGTCCG ATTTTTGAGAAAAAATTTTTTCCGGCCGAATATGCCGGAAATATGCNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCCGGAAATAT GCCGGAAATCGCCGTTTTTCTGGATTTTCATTAGACTTTTTCCTTATAAT TGGTTGTTTTTTCATTCAAAAACATTATTAATAGCAATGCCCACCATCAA GCATGTTTCGGTTCAATTTTCAATGAAACTGATTTTGGTACAGGAACTTT CTAATAATCGCCAGAACAGCCGAGAATCGCCGGATTCCATGAATTTCTCG ATTTGTTCTCGTATTATTCTGCATTTTCATACTATTGTTCTCATTTTTTC AATTCTCTTATTACATCAATCTTCAGGTAGGTCCATTCAGCATGTACCTT GTTATTGTTTGTTTCATGTACTTTCCAGGGACTTTCCAAAGGGTAATTAT TGATCAAAGTCCAAAACGTTTACTCTACGTTTTTTTGCGGGGAAATTCCT TTTACTGACTCAGTTCTATTTTTGATTTTTAATGAGAAACGTTTTGATTA CGATCTGGAAGCTAGTGTTTTTTCTATGAGTTTCTTGAGCCAAATGTATC TACTTTATTGGTCCATATCATGATACCTTAGCATGTCCTGGTTTTCCCTC TGATCGTGAAGCTTTAACTCTTCGAGCATCTACAACTAATCAGATTTTCA AGGTCAGAGCATTTGTTAATTTTGAGATTTCAAGGGGCCTCATTGTTCTT ACCAAATTTTCTAATGGAAAAAGAGCGTAAGTAGAAATCAAATAGTTGAA TTGTGGATGCAATTAACTTTGGCTTTAGAGATAGCTGAAAGAATAGAATT TTTAATCTTTGTAATCTATAAAAACCTAATCAACTTTTAACTTCGTTGAT ATATATTGTCTCTTTAATANCATGGATGCAATTAACTTTGGCTTTAAAGA TAGCTGAAAGAATAGAATCTTTTTTATTTGTAATCAATCTATAAAAACCT AATCAACTTTTAACTTCGTTGATATTATCTTTTTAATGGTCTCAAGTGAG TACGCTGTGGCTGTACAAGAGCTTTCTTTCGAAACTTTAAAAAGTATTCA AATGATAATGTATAGGTCGATACCAATGGCTGGTGTATCAATATGTTTTC TTTGCTTTATCGTTTGTATGCCAGTATCGATGGCTTTTCGACATACGATT ACAACATGCTTTGAAGTCAGGAATGTCAGTATTATTCCATATGTAGATGC CCCAGGCTCCACATTGCAAGATTCTACTGTGCAGTTGAGATATTTGGTCA AGTCAATGCTGTATGAACCTTGTTTTATAGTTTGGGCTTTCTCACCAGTA CAAAATCGTTTGATTCGACTAAGCGAAGAGAACTACACTCAATTTATCGA GACCCAATTCCAAGCAGTTACGCAAACAGACGAAAATGATTTGCTGGAGC TTTTGTTAAATATACGTCATCACAATAATAATAATATGCAAACTCTTTTT TTCGTGTTTAATGTTTTATCTCCAATCAGGTCGTATTATAATTATTTTAA AATGATCCAGCAAGTTCAAAACATGTACGAGAAAAAACAAATCGACGTTG TGGTATGGAGTTTAGGAAACGCGCTCTATGAAACATTTTGGAATTGGCTA CCAAAACAAAACCTTATAGCAGAAGATATCAGTGGATCACCTCCGTTCGA TCCGCACTTGCATCGAATACTAATGGATCTTATGTTAAATCCTCAGTACG ACTGGCAAAAAAGGTACACACGTAATGCTAATGTCACATGTCGAACGTCA AAACGGATTAATTTGTACTTTTGGATGGAAAATGCTAATCGTGTGCCTAG CAACAAAATTTGGAATGATATTTTTGAAAATTTATCTTTGAATGCAACAT TTAACCGTATCTATGTCAATGATGGAGTAGGACTATCCAATTATCGTTTT ATAATCTCCACCCACAAAGGTTATCAGCCAACAGACAAATTCTTTAACGA AATGTACGAAGAAGAACTAAAGGATGACATCATTGTTATCAACTTACCGA TTACTAAAAGTCAAAATTATAATGGTCCACCTTCATCACCAATGGAATTT AACAAAGAGAACACAATCCATATATATAAAACCCTTAATACCCTTGAAAA CACTCCTCGACTTCGAAAAGGATCGTCTATGGACTATATCATGATACAAG AAGACGATTATTTTAATCCCCTGTTTTTTGAATTGGTTATTCAGCAAGTA AATCGTATATTATGTGAAATGAACTAGACTATTTCTCGCTTATTCGAATT TTCAATTTTTTAATTCGAACCAATTGTTATAAGTTCCCGTTAAGCGTAAA CCCTTGTAAAATACTATATTTCGAACTTCGAACAAATTGAACTTCGAATT AACGAGAGTCAACTGTATTTATTGGTGATTATTATGGATTTATTAGTAAT AGAGACAGTCTCCNCATCGGTTATTTCGATCTGGGAGGGATTTATTGGTT TCTAGGCTATATTTCAAGCCCTACTGAACCATTTTTGAACTTTTGGATGC TCAGATCCAAAGCGTTAAAACTAAGAGTTAAAACTCTACCCTTCGAACCT ACTTTAGAGCACTTGCAAATCGATTTGTTTCAAAACTTCCCGGTGGATTT CCCTTTTGTGCCAAGTATTTTGTCACCGATTCTAGGTTTAATATTCTGAT TTTATTAATTTCACTCTCAATTTTCTTAAAAAGCTAATCGAGGCTCCGCA TTATCCTTAAATTTTTCTTATTTTTTGGCATTTTTTTAGCAAATTCACTC TTATAAAAAAAGTGCATTTGAAGTCGTTGAAGGGACATAAAGTGCACGAA AAGCGTATCATATAACAAAATTTAGTGGAGTTTCCATAAATCGAACAAAG GGGAATCAAATTTGTCTGAGCAGAGAGATGAGTTAAGAAAATTTCGAAAT ATGGAGTAAGGTTTGTTAAGCATTGTTAACTGAAGGGATGAGAAAACTTG TTAAGTGAGTTAAGTGAGCACTGCTTCTTACTTAAATTCAATCAAAACTG TTGTTGTCTTTCAAGGTTAAAAAAGCTAAAAATGTTTAATTTACATCTTT ATTTTACAGTTTTTCACAATTTTTCGTTATTATCTTCCTTCGTTTCGAGC GTAAAACTCCTACTCTTCGGGATATGCGCACTGCTCTTGTTTTGAATATG GAATTTCTCCGGATACATCGCTACATCGGATATTATGTTTAATTTTATTT AAAAAGCGAATTCCCGTTTGGGGTCACTAGTTGCCACCCATATCAGTGCC TATATACCAAGAGTAAAGCCTAAAAGACTGGAGCTGTCGACTGTGTAGAC TACTTGCCTAAGGCTCCCAAAAAGTCTTTGAGCAATTCATTATAAAACAT TAGTTGTTTCTCCTTTTCAAGGTATTTATTGACAAAAAAGAGCTTTTCTC CATTTTGTCCGTAATCGTCTATTTAAGAGATTTGGCTATACTACCTATAG CAAAAATTTGGGTGCCAAATTGTGGGTACCTAACGTTTTCAACTGACCCA TATTGTGATTTGTAGACGATTTCTTGACAATGAAGTACTTTTACTTGTTG CAGGTGTTTTTCAGAGAGTGATTTATCAGTTAAAGTTCAAAAATGTTTTC TCTACGTTTTTTTCTGCGAGGAAAGTACTTTTTATTGTTCCGGGTACTTT CGAAAGGGTTATTATTGATCAAAGTTCAAACCGTTTCTCTACGTTTTTTT TTGCGGGGAAAGTACTTTTTATTGTTTCAGGTACTTTCCAAAGGGGAAAT ATTTATCAAAGTCCAGAATGTTTACTCTACGTTTTTTTGCGGGGAAATTC CTTTTGCTGACTATCAGTTCTATTTTTGATTTTTAATGAGAAACGTTTTG ATTACGATCTGGAAGCTAGGGTTTTTTCTATGAGTTTTCTTGAGGCAAAT GTATCTACTTTATTGGTCATGATACCTTAGCATGTCCTCGTTTTCCCTCT CATGAAGCTTTATAACTCTTCGAGCATCTACCACTGATCAGATTTTCAAG GTCAGAGCATTTGTTAATTTTGAGATTTCAAGGGGGCCTCATTGTTCTTA CCAAATTTTCTAATGGAAAAAGAGCGTAAGTAGAAATCAATTAGTTGAAT CGTGGATGTAATTAACTTTGGCTTTAGAGATAGCTGAAAGAATAGAATTT TTAATCTTTGTAATCTATAAAAACCTAATTAACTTTTAACTTCGTTGATA TTATCTTTTTACTAGTCTCAAGTGAGTACGCTGTGGCTGTAAGAGCTTTC TTTCAAAACTTTAAAAAATATTCAAATGATAATGTATAGGTCGATACCAA TGGCTGGTCTATCGATATGTTTTCTTTGCTTTATTGTTTGTTTGCCAGTA TCGATGGCTTTTCGACATACAATTACAACATGCTTTGAAGTCAGGAATGT CAGTATTATTCCAAATATATTAGATGACCCCGTAACAAACTCCGCATTAA ATCCTTTGCAAGATTCTACTGTGCAGTTGAGATATTTGGTCAAGTCAATG TTGTATGAACCCTGTTTTATAGTTTGGGCATTCTCACCATTACAAAATCG TTTAATTCGGCTAAGTGAAGAGAACTACACTCAATTTATCGACACCCAAT TCCAAACAGTCACGCGAACAGTCACGCAAACAGACGGAAATGATTTGCTG GAGCTTTTGTTAAATATACGTCATCACAACGATAATAATATGCAAACTCT TTTTTTCGTGTTTAATCTATCCCCGATGAGGTCGTTTTATAATTATTTTA AAATGATCCAGCAAGCTCAAAACATGTACGAGAAAAAACAAATCGACGTT GTGGTATGGAGATTAAATAACGCGGTCTATGAAACACTTTGGACTCAGCT ACCAATAACATTTTGGATACCAAAAGAAAACCTTGTAGTAGATGATATGG GATGGTCACCTTCATTCGACCCACACTTGCATCGAATACTAATGGATCTT ATGTTCAATCCACAGTACGACTGGCAAAAAAGGTACTCGCGTAATGCTAA TGTCACATGTCGAACGTCAAAACGGATTAATTTGTACTTTTGGGAAACAT TTATTGGTGATCGTGTGCCTAGCATCAAAACTTGGAATGATGTTTTTGAA AAATTATCTTTGAACGCAACATTTAACCGTATCTATGTACCATACGATTA TTCTTTTATATTCTCCACCCACAAAAGTTCTCAGTTAACAGAAAAATTCA TTAAAGAAATGAAAGAAGAAGAAAAAAAAAAGGATGACATCATTGTTATC CACTTACCAATTACTAAAAGTCAAAATTATAATGGTCCACCTTCATTACC AATGAAATTTAACAAAGAGAACACAATCCATATACATGAAACCCTTACTA CCCTTGAAGACACTCCTCAACTTCGAAAAGGATCGTCTATGAACTATATC ATGATACAAGAAAACGATTATTTTAACCCCCTGTTTTTTGAATTGGTTAT TCAGCAAGTAAA

Coding sequence (CDS) from alignment at scaffold_100:721773..736834-

>TCONS_00045749 ID=TCONS_00045749|Name=TCONS_00045749|organism=Clytia hemisphaerica|type=CDS|length=642bp|location=Sequence derived from alignment at scaffold_100:721773..736834- (Clytia hemisphaerica)
CAAAATCGTTTGATTCGACTAAGCGAAGAGAACTACACTCAATTTATCGA
GACCCAATTCCAAGCAGTTACACAAACAGACGAAAATGATTTGCTGGAGC
TTTTGTTAAATATACGTCATCACAACGATAATAATATGCAAACTCTTTTT
TTCGTGGTTCATATGTTTGGAATGAGGTCGTATTATAATTATTTTAGAAT
GATCCAGCAAGCTCAAAACATGTACGAGCAAAAACAAATCGACGTTGTGG
TATGGAGTTTAACAAACTTGGTCTATGAAACATTTTGGAATTGGCTACCA
AAACAAAACCGTGTAGTAGATGAAATGGGATGGTCACCTTCATTCGACCC
ACACTTGCATCGAATACTAATGGATCTTATGTCCAATCCACAGTACGACT
GGCAAAAAAGGTACACACGTAATGTTAATGTAACATGTCGAACGTCAAAA
CGGATTAATTTGTACTTTTGGTATACAGATGATAATGATAGTAATCGTGT
GCCTAGCAACAAAATTTGGAATGATGTTTTTGAAAATTTATCTTTGAATG
CAACATTTAACCGTATCTTTGAACCATACAATTATTCGTTTTATAATCTC
CACCCACAAAAGTTCTCATCAGTCAACAGACAAATTCATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029235XLOC_029235Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045749-proteinTCONS_00045749-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045749-exon-scaffold_100-1575043694:736162..736834TCONS_00045749-exon-scaffold_100-1575043694:736162..736834Clytia hemisphaericaexon
TCONS_00045749-exon-scaffold_100-1575043694:721773..721996TCONS_00045749-exon-scaffold_100-1575043694:721773..721996Clytia hemisphaericaexon
TCONS_00045749-exon-scaffold_100-1510915933:736162..736834TCONS_00045749-exon-scaffold_100-1510915933:736162..736834Clytia hemisphaericaexon
TCONS_00045749-exon-scaffold_100-1510915933:721773..721996TCONS_00045749-exon-scaffold_100-1510915933:721773..721996Clytia hemisphaericaexon
TCONS_00045749-exon-scaffold_100-1491911889:736162..736834TCONS_00045749-exon-scaffold_100-1491911889:736162..736834Clytia hemisphaericaexon
TCONS_00045749-exon-scaffold_100-1491911889:721773..721996TCONS_00045749-exon-scaffold_100-1491911889:721773..721996Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_100supercontigscaffold_100:721773..736834 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.773626 1.53649 0.592603 0.429357 1.30031 0.577685 0.357652 1.299 0.737795 2.11788 2.85419 1.00569 5.95128 3.32718 2.80887 4.77415 0.904848 2.31107 4.78437 5.46831 1.18899 0.469232 1.46418 1.18983 0.0869888 0.29647 1.76965 0.436517 4.96747 11.5096
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045749 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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