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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045635 ID=TCONS_00045635|Name=TCONS_00045635|organism=Clytia hemisphaerica|type=transcript|length=779bpRun BLAST on NCBI protein sequence of TCONS_00045635-protein >TCONS_00045635-protein ID=TCONS_00045635-protein|Name=TCONS_00045635-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp KLFKCKECGKCFKTNGSLKKHQIIHTEQKLFKCEECGKCFKTNGSLKQHKRun BLAST on NCBI transcript from alignment at scaffold_10:308409..309187 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00045635 ID=TCONS_00045635|Name=TCONS_00045635|organism=Clytia hemisphaerica|type=transcript|length=779bp|location=Sequence derived from alignment at scaffold_10:308409..309187 (Clytia hemisphaerica) Coding sequence (CDS) from alignment at scaffold_10:308409..309187 >TCONS_00045635 ID=TCONS_00045635|Name=TCONS_00045635|organism=Clytia hemisphaerica|type=CDS|length=762bp|location=Sequence derived from alignment at scaffold_10:308409..309187 (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Annotated Terms
The following terms have been associated with this transcript:
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Blast
BLAST of TCONS_00045635 vs. Swiss-Prot (Human)
Match: ZN493 (Zinc finger protein 493 OS=Homo sapiens GN=ZNF493 PE=2 SV=3) HSP 1 Score: 203.756 bits (517), Expect = 3.196e-60 Identity = 103/203 (50.74%), Postives = 135/203 (66.50%), Query Frame = -1
Query: 171 KLFKCKECGKCFKTNGSLKKHQIIHTEQKLFKCEECGKCFKTNGSLKQHKIIHTKEKAFKCEECGKCFQSKGNLKYHMTVHTGQKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCYSVKRSLNRHLYLHNEIKSFKIEECGKSFFRKDTLNLHMKTHKRIKHVQIEEQEKPFRCNKCDKCFNSLSHLTGHDKSHS 779
K +KC+ECGK FK + +L KH+IIHTE+K +KCEECGK F + +L HKIIHT EK +KCEECGK F+ L H +HTG+KP+KCE+CGK+F R + L H +HTG KP+KC ECGK +SV +L +H +H + K +K EECGK+F R L++H K H EKP++C +C K F SHL GH + HS
Sbjct: 331 KPYKCEECGKAFKRSSTLTKHRIIHTEEKPYKCEECGKAFNQSSTLSIHKIIHTGEKPYKCEECGKAFKRSSTLTIHKMIHTGEKPYKCEECGKAFNRSSHLTTHKRIHTGHKPYKCKECGKSFSVFSTLTKHKIIHTDKKPYKCEECGKAFNRSSILSIHKKIH---------TGEKPYKCEECGKAFKRSSHLAGHKQIHS 524 HSP 2 Score: 182.57 bits (462), Expect = 1.679e-52 Identity = 96/203 (47.29%), Postives = 128/203 (63.05%), Query Frame = -1
Query: 171 KLFKCKECGKCFKTNGSLKKHQIIHTEQKLFKCEECGKCFKTNGSLKQHKIIHTKEKAFKCEECGKCFQSKGNLKYHMTVHTGQKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCYSVKRSLNRHLYLHNEIKSFKIEECGKSFFRKDTLNLHMKTHKRIKHVQIEEQEKPFRCNKCDKCFNSLSHLTGHDKSHS 779
K +KC+ECGK F +L KH+IIHTE+K +CEECGK +K + L HK IHT EK +KCEECGK F L H +HT +KP+KCE+CGK+F R ++L H +HT +KP+KC ECGK ++ +L+ H +H K +K EECGK+F R TL +H I EKP++C +C K FN SHLT H + H+
Sbjct: 247 KPYKCEECGKAFSIFSTLTKHKIIHTEEKSHRCEECGKAYKESSHLTTHKRIHTGEKPYKCEECGKTFSVFSILTKHKIIHTEEKPYKCEECGKAFKRSSTLTKHRIIHTEEKPYKCEECGKAFNQSSTLSIHKIIHTGEKPYKCEECGKAFKRSSTLTIHK---------MIHTGEKPYKCEECGKAFNRSSHLTTHKRIHT 440 HSP 3 Score: 177.948 bits (450), Expect = 7.063e-51 Identity = 96/221 (43.44%), Postives = 128/221 (57.92%), Query Frame = -1
Query: 174 KLFKCKECGKCFKTNGSLKKHQIIHTEQKLFKCEECGKCFKTNGSLKQHKIIHTKEKAFKCEECGKCFQSKGNLKYHMTVHTGQKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCYSVKRSLNRHLYLHNEIKSFKIEECGKSFFRKDTLNLHMKTH-------------------KRIKHVQIEEQEKPFRCNKCDKCFNSLSHLTGHDKSH 779
K +KC+ECGK F + L H+ IHT K +KC+ECGK F +L +HKIIHT +K +KCEECGK F L H +HTG+KP+KCE+CGK+F R + L H +H+ QKP+KC ECGK +S+ +L +H +H E K +K E+CGK+F+R LN H H IKH I +KP++C C K F SHL+ H H
Sbjct: 415 KPYKCEECGKAFNRSSHLTTHKRIHTGHKPYKCKECGKSFSVFSTLTKHKIIHTDKKPYKCEECGKAFNRSSILSIHKKIHTGEKPYKCEECGKAFKRSSHLAGHKQIHSVQKPYKCEECGKAFSIFSTLTKHKIIHTEEKPYKCEKCGKTFYRFSNLNTHKIIHTGEKPCKCEECGKAFNHSSNLIKHKLIHTGDKPYKCEACGKAFRRSSHLSRHKIIH 635 HSP 4 Score: 176.407 bits (446), Expect = 2.567e-50 Identity = 96/204 (47.06%), Postives = 130/204 (63.73%), Query Frame = -1
Query: 168 KLFKCKECGKCFKTNGSLKKHQIIHTEQKLFKCEECGKCFKTNGSLKQHKIIHTKEKAFKCEECGKCFQSKGNLKYHMTVHTGQKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCYSVKRSLNRHLYLHNEIKSFKIEECGKSFFRKDTLNLHMKTHKRIKHVQIEEQEKPFRCNKCDKCFNSLSHLTGHDKSHSE 779
K +KC+ECGK F + +L H+IIHT +K +KCEECGK FK + +L HK+IHT EK +KCEECGK F +L H +HTG KP+KC++CGKSF ++L H +HT +KP+KC ECGK ++ L+ H +H K +K EECGK+F R H+ HK+I VQ KP++C +C K F+ S LT H H+E
Sbjct: 359 KPYKCEECGKAFNQSSTLSIHKIIHTGEKPYKCEECGKAFKRSSTLTIHKMIHTGEKPYKCEECGKAFNRSSHLTTHKRIHTGHKPYKCKECGKSFSVFSTLTKHKIIHTDKKPYKCEECGKAFNRSSILSIHKKIHTGEKPYKCEECGKAFKRSS----HLAGHKQIHSVQ-----KPYKCEECGKAFSIFSTLTKHKIIHTE 553 HSP 5 Score: 174.481 bits (441), Expect = 1.286e-49 Identity = 93/205 (45.37%), Postives = 128/205 (62.44%), Query Frame = -1
Query: 165 KLFKCKECGKCFKTNGSLKKHQIIHTEQKLFKCEECGKCFKTNGSLKQHKIIHTKEKAFKCEECGKCFQSKGNLKYHMTVHTGQKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCYSVKRSLNRHLYLHNEIKSFKIEECGKSFFRKDTLNLHMKTHKRIKHVQIEEQEKPFRCNKCDKCFNSLSHLTGHDKSHSER 779
K +C+ECGK +K + L H+ IHT +K +KCEECGK F L +HKIIHT+EK +KCEECGK F+ L H +HT +KP+KCE+CGK+F + ++L H +HTG+KP+KC ECGK + +L H +H K +K EECGK+F R H+ THKR I KP++C +C K F+ S LT H H+++
Sbjct: 275 KSHRCEECGKAYKESSHLTTHKRIHTGEKPYKCEECGKTFSVFSILTKHKIIHTEEKPYKCEECGKAFKRSSTLTKHRIIHTEEKPYKCEECGKAFNQSSTLSIHKIIHTGEKPYKCEECGKAFKRSSTLTIHKMIHTGEKPYKCEECGKAFNRSS----HLTTHKR-----IHTGHKPYKCKECGKSFSVFSTLTKHKIIHTDK 470 HSP 6 Score: 168.318 bits (425), Expect = 1.919e-47 Identity = 99/231 (42.86%), Postives = 132/231 (57.14%), Query Frame = -1
Query: 87 KLFKCKECGKCFKTNGSLKKHQIIHTEQKLFKCEECGKCFKTNGSLKQHKIIHTKEKAFKCEECGKCFQSKGNLKYHMTVHTGQKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCYSVKRSLNRHLYLHNEIKSFKIEECGKSFFRKDTLNLHMKTHKRIKHVQIEEQEKPFRCNKCDKCFNSLSHLTGHDKSHSERIVMLYGERESKELSTKKHQNQNQNLL 779
K +KC+ECGK FK + +L H++IHT +K +KCEECGK F + L HK IHT K +KC+ECGK F L H +HT +KP+KCE+CGK+F R + L H +HTG+KP+KC ECGK + L H +H+ K +K EECGK+F TL KH I +EKP++C KC K F S+L H H+ GE+ K K N + NL+
Sbjct: 387 KPYKCEECGKAFKRSSTLTIHKMIHTGEKPYKCEECGKAFNRSSHLTTHKRIHTGHKPYKCKECGKSFSVFSTLTKHKIIHTDKKPYKCEECGKAFNRSSILSIHKKIHTGEKPYKCEECGKAFKRSSHLAGHKQIHSVQKPYKCEECGKAFSIFSTLT---------KHKIIHTEEKPYKCEKCGKTFYRFSNLNTHKIIHT-------GEKPCKCEECGKAFNHSSNLI 601 HSP 7 Score: 164.466 bits (415), Expect = 3.356e-46 Identity = 92/203 (45.32%), Postives = 122/203 (60.10%), Query Frame = -1
Query: 171 KLFKCKECGKCFKTNGSLKKHQIIHTEQKLFKCEECGKCFKTNGSLKQHKIIHTKEKAFKCEECGKCFQSKGNLKYHMTVHTGQKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCYSVKRSLNRHLYLHNEIKSFKIEECGKSFFRKDTLNLHMKTHKRIKHVQIEEQEKPFRCNKCDKCFNSLSHLTGHDKSHS 779
K +KC+ECGK F + KH+IIHTE+K +CEE K +K + L HK IHT EK +KCEECGK F L H +HT +K +CE+CGK++ + L H +HTG+KP+KC ECGK +SV L +H +H E K +K EECGK+F R TL KH I +EKP++C +C K FN S L+ H H+
Sbjct: 191 KPYKCEECGKAFSIFSTPTKHKIIHTEEKSHRCEEYCKAYKESSHLTTHKRIHTGEKPYKCEECGKAFSIFSTLTKHKIIHTEEKSHRCEECGKAYKESSHLTTHKRIHTGEKPYKCEECGKTFSVFSILTKHKIIHTEEKPYKCEECGKAFKRSSTLT---------KHRIIHTEEKPYKCEECGKAFNQSSTLSIHKIIHT 384 HSP 8 Score: 153.295 bits (386), Expect = 3.627e-42 Identity = 86/204 (42.16%), Postives = 121/204 (59.31%), Query Frame = -1
Query: 168 KLFKCKECGKCFKTNGSLKKHQIIHTEQKLFKCEECGKCFKTNGSLKQHKIIHTKEKAFKCEECGKCFQSKGNLKYHMTVHTGQKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCYSVKRSLNRHLYLHNEIKSFKIEECGKSFFRKDTLNLHMKTHKRIKHVQIEEQEKPFRCNKCDKCFNSLSHLTGHDKSHSE 779
K +KC+ECG F L +H++IHT +K +KCE+ GK F + +L HKIIH EK +KCEECGK F H +HT +K +CE+ K++ + L H +HTG+KP+KC ECGK +S+ +L +H +H E KS + EECGK++ H+ THKR I EKP++C +C K F+ S LT H H+E
Sbjct: 135 KPYKCEECGTSFYQFSYLTRHKLIHTREKPYKCEQYGKTFNQSSTLTGHKIIHNGEKPYKCEECGKAFSIFSTPTKHKIIHTEEKSHRCEEYCKAYKESSHLTTHKRIHTGEKPYKCEECGKAFSIFSTLTKHKIIHTEEKSHRCEECGKAYKESS----HLTTHKR-----IHTGEKPYKCEECGKTFSVFSILTKHKIIHTE 329 HSP 9 Score: 145.976 bits (367), Expect = 1.455e-39 Identity = 83/202 (41.09%), Postives = 121/202 (59.90%), Query Frame = -1
Query: 168 FKCKECGKCFKTNGSLKKHQIIHTEQKLFKCEECGKCFKTNGSLKQHKIIHTKEKAFKCEECGKCFQSKGNLKYHMTVHTGQKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCYSVKRSLNRHLYLHNEIKSFKIEECGKSFFRKDTLNLHMKTHKRIKHVQIEEQEKPFRCNKCDKCFNSLSHLTGHDKSHSE 773
++C+ECGK F +L +H+ +HT +K +K ECGK F + +L HK IHT +K +KCEECG F L H +HT +KP+KCE+ GK+F + ++L H +H G+KP+KC ECGK +S+ + +H +H E KS + EE K++ H+ THKR I EKP++C +C K F+ S LT H H+E
Sbjct: 82 YRCEECGKAFIWFSTLTRHRRVHTGEKSYK-YECGKSFNQDSNLTTHKRIHTGQKPYKCEECGTSFYQFSYLTRHKLIHTREKPYKCEQYGKTFNQSSTLTGHKIIHNGEKPYKCEECGKAFSIFSTPTKHKIIHTEEKSHRCEEYCKAYKESS----HLTTHKR-----IHTGEKPYKCEECGKAFSIFSTLTKHKIIHTE 273 HSP 10 Score: 131.724 bits (330), Expect = 1.760e-34 Identity = 83/204 (40.69%), Postives = 113/204 (55.39%), Query Frame = -1
Query: 168 KLFKCKECGKCFKTNGSLKKHQIIHTEQKLFKCEECGKCFKTNGSLKQHKIIHTKEKAFKCEECGKCFQSKGNLKYHMTVHTGQKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCYSVKRSLNRHLYLHNEIKSFKIEECGKSFFRKDTLNLHMKTHKRIKHVQIEEQEKPFRCNKCDKCFNSLSHLTGHDKSHSE 779
K+F+C + K F + +H HT +K FKC++CGK F L QHK IH +E +++CEECGK F L H VHTG+K +K E CGKSF + ++L H +HTGQKP+KC ECG + L RH +H K +K E+ GK+F + TL H H EKP++C +C K F+ S T H H+E
Sbjct: 24 KIFQCDKYVKVFHKLLNSNRHNTKHTGKKPFKCKKCGKSFCMLLHLCQHKRIHIRENSYRCEECGKAFIWFSTLTRHRRVHTGEKSYKYE-CGKSFNQDSNLTTHKRIHTGQKPYKCEECGTSFYQFSYLTRHKLIHTREKPYKCEQYGKTFNQSSTLTGHKIIH---------NGEKPYKCEECGKAFSIFSTPTKHKIIHTE 217 HSP 11 Score: 119.783 bits (299), Expect = 3.287e-30 Identity = 61/111 (54.95%), Postives = 74/111 (66.67%), Query Frame = -1
Query: 447 KLFKCKECGKCFKTNGSLKKHQIIHTEQKLFKCEECGKCFKTNGSLKQHKIIHTKEKAFKCEECGKCFQSKGNLKYHMTVHTGQKPFKCEKCGKSFPRKNSLKYHMTVHTG 779
K +KC+ECGK F +L KH+IIHTE+K +KCE+CGK F +L HKIIHT EK KCEECGK F NL H +HTG KP+KCE CGK+F R + L H +H G
Sbjct: 527 KPYKCEECGKAFSIFSTLTKHKIIHTEEKPYKCEKCGKTFYRFSNLNTHKIIHTGEKPCKCEECGKAFNHSSNLIKHKLIHTGDKPYKCEACGKAFRRSSHLSRHKIIHIG 637 HSP 12 Score: 103.219 bits (256), Expect = 1.629e-24 Identity = 66/178 (37.08%), Postives = 98/178 (55.06%), Query Frame = -1
Query: 171 TEQKLFKCEECGKCFKTNGSLKQHKIIHTKEKAFKCEECGKCFQSKGNLKYHMTVHTGQKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCYSVKRSLNRHLYLHNEIKSFKIEECGKSFFRKDTLNLHMKTHKRIKHVQIEEQEKPFRCNKCDKCFNSLSHLTGHDKSHS 704
T+ K+F+C++ K F + +H HT +K FKC++CGK F +L H +H + ++CE+CGK+F ++L H VHTG+K +K ECGK ++ +L H +H K +K EECG SF++ L H H R EKP++C + K FN S LTGH H+
Sbjct: 21 TQSKIFQCDKYVKVFHKLLNSNRHNTKHTGKKPFKCKKCGKSFCMLLHLCQHKRIHIRENSYRCEECGKAFIWFSTLTRHRRVHTGEKSYK-YECGKSFNQDSNLTTHKRIHTGQKPYKCEECGTSFYQFSYLTRHKLIHTR---------EKPYKCEQYGKTFNQSSTLTGHKIIHN 188 The following BLAST results are available for this feature:
BLAST of TCONS_00045635 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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