TCONS_00045522 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045522
Unique NameTCONS_00045522
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length287

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045522 ID=TCONS_00045522|Name=TCONS_00045522|organism=Clytia hemisphaerica|type=transcript|length=287bp
ATCAGGAATAAATGAGTTGCTACTACCAGCTATTATCTTTTTGCAAGTAT
AATACAGATTCAATGACCAGAAAGTTTAGGATAATATATAAATATCATTA
GATTTTGAATTCTTTCTATCTTTCAGGCCCAACCAGTTGCTCGAGCCAGT
CTTAATGTTAACGTAGAAGGAAGTTTCGAAGCTTCACTTACCCTCCAACA
AGCAGCCAGGGTTGCTTTAGATGGACTGACTATCGAATATGATCCTTCAA
ATGGGAAACCAAAATTGTCAGTAGCTGCTTCTCAAAA
Run BLAST on NCBI

transcript from alignment at sc0008183:1..287

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045522 ID=TCONS_00045522|Name=TCONS_00045522|organism=Clytia hemisphaerica|type=transcript|length=287bp|location=Sequence derived from alignment at sc0008183:1..287 (Clytia hemisphaerica)
TTTTGAGAAGCAGCTACTGACAATTTTGGTTTCCCATTTGAAGGATCATA
TTCGATAGTCAGTCCATCTAAAGCAACCCTGGCTGCTTGTTGGAGGGTAA
GTGAAGCTTCGAAACTTCCTTCTACGTTAACATTAAGACTGGCTCGAGCA
ACTGGTTGGGCCTGAAAGATAGAAAGAATTCAAAATCTAATGATATTTAT
ATATTATCCTAAACTTTCTGGTCATTGAATCTGTATTATACTTGCAAAAA
GATAATAGCTGGTAGTAGCAACTCATTTATTCCTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029099XLOC_029099Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045522-exon-sc0008183-1491911889:1..287TCONS_00045522-exon-sc0008183-1491911889:1..287Clytia hemisphaericaexon
TCONS_00045522-exon-sc0008183-1510915933:1..287TCONS_00045522-exon-sc0008183-1510915933:1..287Clytia hemisphaericaexon
TCONS_00045522-exon-sc0008183-1575043694:1..287TCONS_00045522-exon-sc0008183-1575043694:1..287Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0008183supercontigsc0008183:1..287 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.33309	3.97013	2.04876	3.00658	0.610038	0.48206	134.346	148.097	369.762	232.783	511.01	510.656	171.787	150.908	114.82	144.445	39.3922	42.4641	30.295	22.6439	24.4928	26.8801	30.305	18.9367	0.485683	0.866921	21.8658	15.2255	25.6065	25.0659
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045522 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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