TCONS_00045492 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045492
Unique NameTCONS_00045492
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length502

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045492 ID=TCONS_00045492|Name=TCONS_00045492|organism=Clytia hemisphaerica|type=transcript|length=502bp
CTTTCCGTGCGCTGCGACCGCACTTCTTGgcttcaatcttttttgcttgg
aaaaaagattacgtcataaaaatgtagcatGCACTCgaagaaaaagttga
acacacttcaacttttttcaaccgttacatCTGATCGCACCAATGgtgtt
gcttcatttttcttttgaccaatagcgtggaagatttactcgaaaaagtg
cgatcgaaacGCGCGCATGTGGAGACTGGCCTTTAGTTGAGCTAGATAGA
ATGCTAAAAATAGTTGCGTTTCACCGCAGAGACATTCAAAGATTTGTGGA
AAAAAGTCTGAGGCAGGAAATGTTGCATAACCGTCACAAACCTTACTTcg
cgttatcttttcagtcagcgaagaagagtttggtataGGCTATAGTTGTG
AAGGTGTGATTGGTTAAACCTTTTCTATTATGCACATACCTCCTTTTTGT
AACAAGAACTCGGCGATATTAAGGAAATTATTCTCTACAGCGTCATGCAA
TG
Run BLAST on NCBI

transcript from alignment at sc0008057:26..527

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045492 ID=TCONS_00045492|Name=TCONS_00045492|organism=Clytia hemisphaerica|type=transcript|length=502bp|location=Sequence derived from alignment at sc0008057:26..527 (Clytia hemisphaerica)
CATTGCATGACGCTGTAGAGAATAATTTCCTTAATATCGCCGAGTTCTTG
TTACAAAAAGGAGGTATGTGCATAATAGAAAAGGTTTAACCAATCACACC
TTCACAACTATAGCCtataccaaactcttcttcgctgactgaaaagataa
cgcgAAGTAAGGTTTGTGACGGTTATGCAACATTTCCTGCCTCAGACTTT
TTTCCACAAATCTTTGAATGTCTCTGCGGTGAAACGCAACTATTTTTAGC
ATTCTATCTAGCTCAACTAAAGGCCAGTCTCCACATGCGCGCgtttcgat
cgcactttttcgagtaaatcttccacgctattggtcaaaagaaaaatgaa
gcaacacCATTGGTGCGATCAGatgtaacggttgaaaaaagttgaagtgt
gttcaactttttcttcGAGTGCatgctacatttttatgacgtaatctttt
ttccaagcaaaaaagattgaagcCAAGAAGTGCGGTCGCAGCGCACGGAA
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029069XLOC_029069Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045492-exon-sc0008057-1491911889:26..527TCONS_00045492-exon-sc0008057-1491911889:26..527Clytia hemisphaericaexon
TCONS_00045492-exon-sc0008057-1510915933:26..527TCONS_00045492-exon-sc0008057-1510915933:26..527Clytia hemisphaericaexon
TCONS_00045492-exon-sc0008057-1575043694:26..527TCONS_00045492-exon-sc0008057-1575043694:26..527Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0008057supercontigsc0008057:26..527 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.644816	1.02244	1.80979	1.69635	0.163289	1.29726	0.778366	1.46074	0.517931	0.51165	0.24535	0.567514	0.4089	0.585414	0	0.800154	0.381826	0.396311	1.71654	0.877586	0.386199	0.720984	0	0.617551	1.04087	1.16113	0.498092	0.802614	0.157784	0.18252
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045492 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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