TCONS_00045464 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045464
Unique NameTCONS_00045464
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length208

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045464 ID=TCONS_00045464|Name=TCONS_00045464|organism=Clytia hemisphaerica|type=transcript|length=208bp
caaaaaaattgataaaaagaagtcTTTTACTAGAAATCAACTACTGGAAA
ACACAAGCTGGACTCTTAGGagttgatttttgcaaaaatatgaattttca
aaaattgatggatACTTTCTTTTGTCAGATCACGGCAGACTAGGTTAACA
TCATTAAATTTTAACTTCATTTTGTACAGACCTATTAATGCTATGAAACA
AATAAAGT
Run BLAST on NCBI

transcript from alignment at sc0007931:2..209

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045464 ID=TCONS_00045464|Name=TCONS_00045464|organism=Clytia hemisphaerica|type=transcript|length=208bp|location=Sequence derived from alignment at sc0007931:2..209 (Clytia hemisphaerica)
ACTTTATTTGTTTCATAGCATTAATAGGTCTGTACAAAATGAAGTTAAAA
TTTAATGATGTTAACCTAGTCTGCCGTGATCTGACAAAAGAAAGTatcca
tcaatttttgaaaattcatatttttgcaaaaatcaactCCTAAGAGTCCA
GCTTGTGTTTTCCAGTAGTTGATTTCTAGTAAAAgacttctttttatcaa
tttttttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029041XLOC_029041Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045464-exon-sc0007931-1491911889:2..209TCONS_00045464-exon-sc0007931-1491911889:2..209Clytia hemisphaericaexon
TCONS_00045464-exon-sc0007931-1510915933:2..209TCONS_00045464-exon-sc0007931-1510915933:2..209Clytia hemisphaericaexon
TCONS_00045464-exon-sc0007931-1575043694:2..209TCONS_00045464-exon-sc0007931-1575043694:2..209Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0007931supercontigsc0007931:2..209 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.20044	1.68069	0	1.7201	2.01509	3.64545	7.28894	2.50171	0.335195	0	7.22044	2.02322	0	3.19345	0	0	0	6.9875	4.38029	2.79371	2.10009	0	3.09465	0	0	2.03538	3.06173	1.64754	3.86668
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045464 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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