TCONS_00045442 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045442
Unique NameTCONS_00045442
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length157

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045442 ID=TCONS_00045442|Name=TCONS_00045442|organism=Clytia hemisphaerica|type=transcript|length=157bp
ATCAGCTTGTTTGCATGGATTGCTTTTGATAATTACGTTCTTTGGTTAAC
GTTGTCAAAGAAATGCAAAGATTTTTTACCAGTCAAAGTCATGTTCTACG
TTTTCGCTTTTCCATTACCATTCCTATTTATCTCACTCATGATTGGTTAT
CTAGTTG
Run BLAST on NCBI

transcript from alignment at sc0007839:22..489+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045442 ID=TCONS_00045442|Name=TCONS_00045442|organism=Clytia hemisphaerica|type=transcript|length=468bp|location=Sequence derived from alignment at sc0007839:22..489+ (Clytia hemisphaerica)
ATCAGCTTGTTTGCATGGATTGCTTTTGATAATTACGTTCTTTGGTTAAC
GTTGTCAAAGAAATGCAAAGATTTTTTACCAGTCAAAGTCATGTTCTACG
TTTTCGGTAATTTTTATTGACATTTATGTTCAGTGGATGCTCCCTaatta
attgcgtagaaaaatcgcgggtgacgtctagtataggctagggTAGTTAG
TACAGGCTAGGCTGGATGTTGCTTGAATACAACTCAAATTATATTCATCG
TACCAATACCACCGGgtactttgaaaattttcacctCCACGATAATTAGG
GATAATTTAAAAGTAAAAGTTGGAGATAAAGCCGTGTTCAGAAAAGCCGT
ACCAAACTGGCCTAACAAACCGACTTACATCAACTCaaattctttcttct
ttcttttcccTTTTCAGCTTTTCCATTACCATTCCTATTTATCTCACTCA
TGATTGGTTATCTAGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029020XLOC_029020Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045442-exon-sc0007839-1491911889:22..127TCONS_00045442-exon-sc0007839-1491911889:22..127Clytia hemisphaericaexon
TCONS_00045442-exon-sc0007839-1510915933:22..127TCONS_00045442-exon-sc0007839-1510915933:22..127Clytia hemisphaericaexon
TCONS_00045442-exon-sc0007839-1575043694:22..127TCONS_00045442-exon-sc0007839-1575043694:22..127Clytia hemisphaericaexon
TCONS_00045442-exon-sc0007839-1491911889:439..489TCONS_00045442-exon-sc0007839-1491911889:439..489Clytia hemisphaericaexon
TCONS_00045442-exon-sc0007839-1510915933:439..489TCONS_00045442-exon-sc0007839-1510915933:439..489Clytia hemisphaericaexon
TCONS_00045442-exon-sc0007839-1575043694:439..489TCONS_00045442-exon-sc0007839-1575043694:439..489Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0007839supercontigsc0007839:22..489 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045442 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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