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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045359 ID=TCONS_00045359|Name=TCONS_00045359|organism=Clytia hemisphaerica|type=transcript|length=424bp
CATTGCGAGTCCATTGCAGACTTCTTGTCAATCCAAAACAACTGGGTCGA
ACGCAAAGATGGAATCGTCCTTTGTGATCTGAAACCGAAtgtaagaaatt
tcaaaatgagtcaTTTCAGGTCCTTCACGTTGGCAAAGGAGTTGAAGCGT
GTCCAAGACATCTGGAATGACCTCCTGGAAAATGATTCAGACAACATCCC
TTGCCACGCAGTCAAAATCAACGAGGAAGGGGAAATAAGGGATTTGAGTA
GCCTTAAATTGATCAAGAGTACACGAAGAGCGTCAAAAAGAAAAGTGACA
GGTATTGAGGTGCCCACAGCAATAGATCTGAACATTACACCGGCGGCAGC
TATTGCAAATATGGTTTTGGACAGCCCAAACTTAGAACAACTCAAGAAAA
CAAGCCGTCTTCAATCTTTTCGAC Run BLAST on NCBI protein sequence of TCONS_00045359-protein >TCONS_00045359-protein ID=TCONS_00045359-protein|Name=TCONS_00045359-protein|organism=Clytia hemisphaerica|type=polypeptide|length=141bp
HCESIADFLSIQNNWVERKDGIVLCDLKPNVRNFKMSHFRSFTLAKELKR
VQDIWNDLLENDSDNIPCHAVKINEEGEIRDLSSLKLIKSTRRASKRKVT
GIEVPTAIDLNITPAAAIANMVLDSPNLEQLKKTSRLQSFR Run BLAST on NCBI transcript from alignment at sc0007604:2..814+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045359 ID=TCONS_00045359|Name=TCONS_00045359|organism=Clytia hemisphaerica|type=transcript|length=813bp|location=Sequence derived from alignment at sc0007604:2..814+ (Clytia hemisphaerica)
CATTGCGAGTCCATTGCAGACTTCTTGTCAATCCAAAACAACTGGGTCGA
ACGCAAAGATGGAATCGTCCTTTGTGATCTGAAACCGAAtgtaagaaatt
tcaaaatgagtcaTTTCAGGTCCTTCACGTTGGCAAAGGAGTTGAAGCGT
GTCCAAGACATCTGGAATGACCTCCTGGAAAATGATTCAGACAACATCCC
TTGCCACGCAGTCAAAATCAACGAGGAAGGGGAAATAAGGGATTTGAGTA
GCCTTAAATTGATCAAGAGTACACGAAGAGGTAAATAGCACATAGCACAT
TTTTAAACAGTCCATTTTATGTGAACCACCTTCATTGTATGTCAACGTTA
ACAAACAATTCTACTATAAATATAGCATTATATTTCCTTGTTTTGTTCTA
GAAAACAGAAGGTAAGGATAACTATTAAAATTTCTATTCATTCCCTTTGC
AGCGTCAAAAAGAAAAGTGACAGGTATTGAGGTGCCCACAGCAATAGATC
TGAACATTACACCGGCGGCAGCTATTGCAAATATGGTTTTGGACAGCCCA
AACTTAGAACAACTCAAGGTTCGAATAACAGCCCAGAGCCTAAATTTAgc
attaaaataaaatagcaAAACAGTGAAAACTTTACGGTTGATTTTTATTT
GTTGTATTAATTACACTTTTTTCAGTAGAAACAATCTGtaagaagcaaaa
aagtaacAAAGCTATAATCTGTTTTATGTTTTTGAGACATCAGCTAAGAA
ACTGGTTTTATTTACAAAGATTCTTTCTTCTTTAGAAAACAAGCCGTCTT
CAATCTTTTCGAC Coding sequence (CDS) from alignment at sc0007604:2..814+ >TCONS_00045359 ID=TCONS_00045359|Name=TCONS_00045359|organism=Clytia hemisphaerica|type=CDS|length=1269bp|location=Sequence derived from alignment at sc0007604:2..814+ (Clytia hemisphaerica)
CATTGCGAGTCCATTGCAGACTTCTTGTCAATCCAAAACAACTGGGTCGA
ACGCAAAGATGGAATCGTCCTTTGTGATCTGAAACCGAAtgtaagaaatt
tcaaaatgagtcaTTTCAGGTCCTTCACGTTGGCAAAGGAGTTGAAGCGT
GTCCAAGACATCTGGAATGACCTCCTGGAAAATGATTCAGACAACATCCC
TTGCCACGCAGTCAAAATCAACGAGGAAGGGGAAATAAGGGATTTGAGTA
GCCTTAAATTGATCAAGAGTACACGAAGAGCGTCAAAAAGAAAAGTGACA
GGTATTGAGGTGCCCACAGCAATAGATCTGAACATTACACCGGCGGCAGC
TATTGCAAATATGGTTTTGGACAGCCCAAACTTAGAACAACTCAAGAAAA
CAAGCCGTCTTCAATCTTTTCGACATTGCGAGTCCATTGCAGACTTCTTG
TCAATCCAAAACAACTGGGTCGAACGCAAAGATGGAATCGTCCTTTGTGA
TCTGAAACCGAAtgtaagaaatttcaaaatgagtcaTTTCAGGTCCTTCA
CGTTGGCAAAGGAGTTGAAGCGTGTCCAAGACATCTGGAATGACCTCCTG
GAAAATGATTCAGACAACATCCCTTGCCACGCAGTCAAAATCAACGAGGA
AGGGGAAATAAGGGATTTGAGTAGCCTTAAATTGATCAAGAGTACACGAA
GAGCGTCAAAAAGAAAAGTGACAGGTATTGAGGTGCCCACAGCAATAGAT
CTGAACATTACACCGGCGGCAGCTATTGCAAATATGGTTTTGGACAGCCC
AAACTTAGAACAACTCAAGAAAACAAGCCGTCTTCAATCTTTTCGACATT
GCGAGTCCATTGCAGACTTCTTGTCAATCCAAAACAACTGGGTCGAACGC
AAAGATGGAATCGTCCTTTGTGATCTGAAACCGAAtgtaagaaatttcaa
aatgagtcaTTTCAGGTCCTTCACGTTGGCAAAGGAGTTGAAGCGTGTCC
AAGACATCTGGAATGACCTCCTGGAAAATGATTCAGACAACATCCCTTGC
CACGCAGTCAAAATCAACGAGGAAGGGGAAATAAGGGATTTGAGTAGCCT
TAAATTGATCAAGAGTACACGAAGAGCGTCAAAAAGAAAAGTGACAGGTA
TTGAGGTGCCCACAGCAATAGATCTGAACATTACACCGGCGGCAGCTATT
GCAAATATGGTTTTGGACAGCCCAAACTTAGAACAACTCAAGAAAACAAG
CCGTCTTCAATCTTTTCGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045359-exon-sc0007604-1491911889:2..281 | TCONS_00045359-exon-sc0007604-1491911889:2..281 | Clytia hemisphaerica | exon |
| TCONS_00045359-exon-sc0007604-1510915933:2..281 | TCONS_00045359-exon-sc0007604-1510915933:2..281 | Clytia hemisphaerica | exon |
| TCONS_00045359-exon-sc0007604-1575043694:2..281 | TCONS_00045359-exon-sc0007604-1575043694:2..281 | Clytia hemisphaerica | exon |
| TCONS_00045359-exon-sc0007604-1491911889:454..569 | TCONS_00045359-exon-sc0007604-1491911889:454..569 | Clytia hemisphaerica | exon |
| TCONS_00045359-exon-sc0007604-1510915933:454..569 | TCONS_00045359-exon-sc0007604-1510915933:454..569 | Clytia hemisphaerica | exon |
| TCONS_00045359-exon-sc0007604-1575043694:454..569 | TCONS_00045359-exon-sc0007604-1575043694:454..569 | Clytia hemisphaerica | exon |
| TCONS_00045359-exon-sc0007604-1491911889:787..814 | TCONS_00045359-exon-sc0007604-1491911889:787..814 | Clytia hemisphaerica | exon |
| TCONS_00045359-exon-sc0007604-1510915933:787..814 | TCONS_00045359-exon-sc0007604-1510915933:787..814 | Clytia hemisphaerica | exon |
| TCONS_00045359-exon-sc0007604-1575043694:787..814 | TCONS_00045359-exon-sc0007604-1575043694:787..814 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0007604 | supercontig | sc0007604:2..814 + |
Blast
The following BLAST results are available for this feature:
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