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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045336 ID=TCONS_00045336|Name=TCONS_00045336|organism=Clytia hemisphaerica|type=transcript|length=861bp
TGCTGTCGTTATGGAGATATATAAGCTGCATAGGTATTCCTGAAGTACTA
AATGGGAAAACTGGAACCTGACTTCGCTGCTCACTCCGATGCCACTGTAC
TTCGTAATGAATCCTGTGTCTTGGTATTGTAGTCCAAATGGCATGCTTTT
GATTTCGTTTTCGGTGAATACCATCTTGTTCTCCATGTATGTTTTCGTAG
ATAGCTCCATAAGCGAGTATAACGATTTCAAGATTGTCTCGTCGTTAACT
ATTGAATTCAAATCCAGTTTGAGTTGACTGTTGTTAATTCTGGAATGGTT
TCTTAGGAATACCAAGCAGCTGTAAAAATACAGCTCTGTGTTCGAGGTTA
ACGGCTTCGTAATGAGTTCTTCAGAGAAAATATGACAAATGATCCATAAA
AATACTGGTACACTCGACATGACTTTCAAATTGTGAGAGTTTTTTATTTC
CTCCTTCACTCGTTCCGCTTTTTCGTTATTCTCACCAAAGAATTTTTCAA
TATATTCAGCCACGTTTTCAGGGTTAAAACCGCAGATTACCACTGTTTTA
ATAATGTTCTTTTTTAAACTGCATTTGACGAACTCTGCAGCTTTTGGCCG
GCCACAAATGACTGTTTTGTGTCCGGGTAGAAGAACTCCTTTGGGGTCGA
TTAGTTCCTGGACAAGTCGAAGATGATGGTACTCCGAGGTAGATTTTTGT
TCCATTTGGAAAATGTCCTGGAGCTCATCGACGCCGTCGACGACAATCAT
AACTCTGTCAGCGATTTCCTTCAAGTCGGCAACTGTAATGAGCTTAAATA
TTTCTGGATAAAACTTTTCGAAAAGATCTTCCGAGCTTTTGACTCCATGA
AGGACAGTGTT Run BLAST on NCBI protein sequence of TCONS_00045336-protein >TCONS_00045336-protein ID=TCONS_00045336-protein|Name=TCONS_00045336-protein|organism=Clytia hemisphaerica|type=polypeptide|length=287bp
NTVLHGVKSSEDLFEKFYPEIFKLITVADLKEIADRVMIVVDGVDELQDI
FQMEQKSTSEYHHLRLVQELIDPKGVLLPGHKTVICGRPKAAEFVKCSLK
KNIIKTVVICGFNPENVAEYIEKFFGENNEKAERVKEEIKNSHNLKVMSS
VPVFLWIICHIFSEELITKPLTSNTELYFYSCLVFLRNHSRINNSQLKLD
LNSIVNDETILKSLYSLMELSTKTYMENKMVFTENEIKSMPFGLQYQDTG
FITKYSGIGVSSEVRFQFSHLVLQEYLCSLYISITTA Run BLAST on NCBI transcript from alignment at sc0007541:1..861 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045336 ID=TCONS_00045336|Name=TCONS_00045336|organism=Clytia hemisphaerica|type=transcript|length=861bp|location=Sequence derived from alignment at sc0007541:1..861 (Clytia hemisphaerica)
AACACTGTCCTTCATGGAGTCAAAAGCTCGGAAGATCTTTTCGAAAAGTT
TTATCCAGAAATATTTAAGCTCATTACAGTTGCCGACTTGAAGGAAATCG
CTGACAGAGTTATGATTGTCGTCGACGGCGTCGATGAGCTCCAGGACATT
TTCCAAATGGAACAAAAATCTACCTCGGAGTACCATCATCTTCGACTTGT
CCAGGAACTAATCGACCCCAAAGGAGTTCTTCTACCCGGACACAAAACAG
TCATTTGTGGCCGGCCAAAAGCTGCAGAGTTCGTCAAATGCAGTTTAAAA
AAGAACATTATTAAAACAGTGGTAATCTGCGGTTTTAACCCTGAAAACGT
GGCTGAATATATTGAAAAATTCTTTGGTGAGAATAACGAAAAAGCGGAAC
GAGTGAAGGAGGAAATAAAAAACTCTCACAATTTGAAAGTCATGTCGAGT
GTACCAGTATTTTTATGGATCATTTGTCATATTTTCTCTGAAGAACTCAT
TACGAAGCCGTTAACCTCGAACACAGAGCTGTATTTTTACAGCTGCTTGG
TATTCCTAAGAAACCATTCCAGAATTAACAACAGTCAACTCAAACTGGAT
TTGAATTCAATAGTTAACGACGAGACAATCTTGAAATCGTTATACTCGCT
TATGGAGCTATCTACGAAAACATACATGGAGAACAAGATGGTATTCACCG
AAAACGAAATCAAAAGCATGCCATTTGGACTACAATACCAAGACACAGGA
TTCATTACGAAGTACAGTGGCATCGGAGTGAGCAGCGAAGTCAGGTTCCA
GTTTTCCCATTTAGTACTTCAGGAATACCTATGCAGCTTATATATCTCCA
TAACGACAGCA Coding sequence (CDS) from alignment at sc0007541:1..861 >TCONS_00045336 ID=TCONS_00045336|Name=TCONS_00045336|organism=Clytia hemisphaerica|type=CDS|length=861bp|location=Sequence derived from alignment at sc0007541:1..861 (Clytia hemisphaerica)
AACACTGTCCTTCATGGAGTCAAAAGCTCGGAAGATCTTTTCGAAAAGTT
TTATCCAGAAATATTTAAGCTCATTACAGTTGCCGACTTGAAGGAAATCG
CTGACAGAGTTATGATTGTCGTCGACGGCGTCGATGAGCTCCAGGACATT
TTCCAAATGGAACAAAAATCTACCTCGGAGTACCATCATCTTCGACTTGT
CCAGGAACTAATCGACCCCAAAGGAGTTCTTCTACCCGGACACAAAACAG
TCATTTGTGGCCGGCCAAAAGCTGCAGAGTTCGTCAAATGCAGTTTAAAA
AAGAACATTATTAAAACAGTGGTAATCTGCGGTTTTAACCCTGAAAACGT
GGCTGAATATATTGAAAAATTCTTTGGTGAGAATAACGAAAAAGCGGAAC
GAGTGAAGGAGGAAATAAAAAACTCTCACAATTTGAAAGTCATGTCGAGT
GTACCAGTATTTTTATGGATCATTTGTCATATTTTCTCTGAAGAACTCAT
TACGAAGCCGTTAACCTCGAACACAGAGCTGTATTTTTACAGCTGCTTGG
TATTCCTAAGAAACCATTCCAGAATTAACAACAGTCAACTCAAACTGGAT
TTGAATTCAATAGTTAACGACGAGACAATCTTGAAATCGTTATACTCGCT
TATGGAGCTATCTACGAAAACATACATGGAGAACAAGATGGTATTCACCG
AAAACGAAATCAAAAGCATGCCATTTGGACTACAATACCAAGACACAGGA
TTCATTACGAAGTACAGTGGCATCGGAGTGAGCAGCGAAGTCAGGTTCCA
GTTTTCCCATTTAGTACTTCAGGAATACCTATGCAGCTTATATATCTCCA
TAACGACAGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045336-exon-sc0007541-1491911889:1..861 | TCONS_00045336-exon-sc0007541-1491911889:1..861 | Clytia hemisphaerica | exon |
| TCONS_00045336-exon-sc0007541-1510915933:1..861 | TCONS_00045336-exon-sc0007541-1510915933:1..861 | Clytia hemisphaerica | exon |
| TCONS_00045336-exon-sc0007541-1575043694:1..861 | TCONS_00045336-exon-sc0007541-1575043694:1..861 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0007541 | supercontig | sc0007541:1..861 . |
Blast
The following BLAST results are available for this feature:
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