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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045313 ID=TCONS_00045313|Name=TCONS_00045313|organism=Clytia hemisphaerica|type=transcript|length=896bp
CACCGAAAAACGTAGTATTCATAATCGATAGCATAGTGGTGTGAATTCGA
GGGTCTGTATTCCTTTTGATGTATAAAACCTGTGTTACCAAGCCCAGACC
GAAACCCAGGGTCTCCAATATGTGGANGATGTATAAAACCTGTGTTACCA
AGCCCAGGCCGAAACCCAGGGTCTCCAATATGTGGATCGGTATGGAGAAC
CATGGGTTGCTTATGAATGCGAATGATAGAAAACGAACGACGTAAGATAA
GCAAGCTAGACAAAGAGCATTCCAAGGCCCTCTTAACAGTTTAATCAACT
TAGCAGCCAGAAACATGAAAAGTGAAGTGCAAAAAGCGACTACACCAAAA
GTTATACCAACCAGTGTAGTTGAACCATCAAGCTCTTCTATCCGTAAAGC
AGTAAAGCCTATGTAAATACCTTGGAGTGTTCCTAAAACAAAGACTGTAA
GAAGGAATAAGATCATCTCGAACTTTTTCAGCGTTTGAAAAACGATTTCT
TTTAAGGGCGTTTCGTCGAGATCGACTTCTGGTCGTTTTTCTATTGTATT
GCTCTTGGATTCTTTAAAGGTTTTCAACTCGAAAGGTTCGGCAGCTTCAT
TTTCCTCAGTCGATTCTCTAAACAAGAAAGGACTCGCTATCGCTAAACCA
ATCAAGTACAAACTCAAAACCACAAACGCTCCAGCAAAACAGTTCACTTT
ATCTGTATACGGAAATACATCAGACAGCGATCCAGATAGGATGGAACCAA
CGGAAAATCCGaaggctccaaacattcgattccgtccaaaattctttttc
tttgatgaTTTGAGGATTCTTTTCACAACACCAGCATCCATCATACTGAT
TAAACAACCGTCAAAGGCGGAAGCAAAGATATTGATAAACAGAAGA Run BLAST on NCBI protein sequence of TCONS_00045313-protein >TCONS_00045313-protein ID=TCONS_00045313-protein|Name=TCONS_00045313-protein|organism=Clytia hemisphaerica|type=polypeptide|length=298bp
LLFINIFASAFDGCLISMMDAGVVKRILKSSKKKNFGRNRMFGAFGFSVG
SILSGSLSDVFPYTDKVNCFAGAFVVLSLYLIGLAIASPFLFRESTEENE
AAEPFELKTFKESKSNTIEKRPEVDLDETPLKEIVFQTLKKFEMILFLLT
VFVLGTLQGIYIGFTALRIEELDGSTTLVGITFGVVAFCTSLFMFLAAKL
IKLLRGPWNALCLACLSYVVRFLSFAFISNPWFSIPIHILETLGFGLGLV
TQVLYIXHILETLGFGLGLVTQVLYIKRNTDPRIHTTMLSIMNTTFFG Run BLAST on NCBI transcript from alignment at sc0007478:2..897 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045313 ID=TCONS_00045313|Name=TCONS_00045313|organism=Clytia hemisphaerica|type=transcript|length=896bp|location=Sequence derived from alignment at sc0007478:2..897 (Clytia hemisphaerica)
TCTTCTGTTTATCAATATCTTTGCTTCCGCCTTTGACGGTTGTTTAATCA
GTATGATGGATGCTGGTGTTGTGAAAAGAATCCTCAAAtcatcaaagaaa
aagaattttggacggaatcgaatgtttggagccttCGGATTTTCCGTTGG
TTCCATCCTATCTGGATCGCTGTCTGATGTATTTCCGTATACAGATAAAG
TGAACTGTTTTGCTGGAGCGTTTGTGGTTTTGAGTTTGTACTTGATTGGT
TTAGCGATAGCGAGTCCTTTCTTGTTTAGAGAATCGACTGAGGAAAATGA
AGCTGCCGAACCTTTCGAGTTGAAAACCTTTAAAGAATCCAAGAGCAATA
CAATAGAAAAACGACCAGAAGTCGATCTCGACGAAACGCCCTTAAAAGAA
ATCGTTTTTCAAACGCTGAAAAAGTTCGAGATGATCTTATTCCTTCTTAC
AGTCTTTGTTTTAGGAACACTCCAAGGTATTTACATAGGCTTTACTGCTT
TACGGATAGAAGAGCTTGATGGTTCAACTACACTGGTTGGTATAACTTTT
GGTGTAGTCGCTTTTTGCACTTCACTTTTCATGTTTCTGGCTGCTAAGTT
GATTAAACTGTTAAGAGGGCCTTGGAATGCTCTTTGTCTAGCTTGCTTAT
CTTACGTCGTTCGTTTTCTATCATTCGCATTCATAAGCAACCCATGGTTC
TCCATACCGATCCACATATTGGAGACCCTGGGTTTCGGCCTGGGCTTGGT
AACACAGGTTTTATACATCNTCCACATATTGGAGACCCTGGGTTTCGGTC
TGGGCTTGGTAACACAGGTTTTATACATCAAAAGGAATACAGACCCTCGA
ATTCACACCACTATGCTATCGATTATGAATACTACGTTTTTCGGTG Coding sequence (CDS) from alignment at sc0007478:2..897 >TCONS_00045313 ID=TCONS_00045313|Name=TCONS_00045313|organism=Clytia hemisphaerica|type=CDS|length=894bp|location=Sequence derived from alignment at sc0007478:2..897 (Clytia hemisphaerica)
CTTCTGTTTATCAATATCTTTGCTTCCGCCTTTGACGGTTGTTTAATCAG
TATGATGGATGCTGGTGTTGTGAAAAGAATCCTCAAAtcatcaaagaaaa
agaattttggacggaatcgaatgtttggagccttCGGATTTTCCGTTGGT
TCCATCCTATCTGGATCGCTGTCTGATGTATTTCCGTATACAGATAAAGT
GAACTGTTTTGCTGGAGCGTTTGTGGTTTTGAGTTTGTACTTGATTGGTT
TAGCGATAGCGAGTCCTTTCTTGTTTAGAGAATCGACTGAGGAAAATGAA
GCTGCCGAACCTTTCGAGTTGAAAACCTTTAAAGAATCCAAGAGCAATAC
AATAGAAAAACGACCAGAAGTCGATCTCGACGAAACGCCCTTAAAAGAAA
TCGTTTTTCAAACGCTGAAAAAGTTCGAGATGATCTTATTCCTTCTTACA
GTCTTTGTTTTAGGAACACTCCAAGGTATTTACATAGGCTTTACTGCTTT
ACGGATAGAAGAGCTTGATGGTTCAACTACACTGGTTGGTATAACTTTTG
GTGTAGTCGCTTTTTGCACTTCACTTTTCATGTTTCTGGCTGCTAAGTTG
ATTAAACTGTTAAGAGGGCCTTGGAATGCTCTTTGTCTAGCTTGCTTATC
TTACGTCGTTCGTTTTCTATCATTCGCATTCATAAGCAACCCATGGTTCT
CCATACCGATCCACATATTGGAGACCCTGGGTTTCGGCCTGGGCTTGGTA
ACACAGGTTTTATACATCNTCCACATATTGGAGACCCTGGGTTTCGGTCT
GGGCTTGGTAACACAGGTTTTATACATCAAAAGGAATACAGACCCTCGAA
TTCACACCACTATGCTATCGATTATGAATACTACGTTTTTCGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045313-exon-sc0007478-1491911889:2..897 | TCONS_00045313-exon-sc0007478-1491911889:2..897 | Clytia hemisphaerica | exon |
| TCONS_00045313-exon-sc0007478-1510915933:2..897 | TCONS_00045313-exon-sc0007478-1510915933:2..897 | Clytia hemisphaerica | exon |
| TCONS_00045313-exon-sc0007478-1575043694:2..897 | TCONS_00045313-exon-sc0007478-1575043694:2..897 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0007478 | supercontig | sc0007478:2..897 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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