TCONS_00045266 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045266
Unique NameTCONS_00045266
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length743

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045266 ID=TCONS_00045266|Name=TCONS_00045266|organism=Clytia hemisphaerica|type=transcript|length=743bp
CTGATTTGATGTTTCAAAAgcgctttttctttttcataaaaatctttAAT
AAACTGATGACATTTTGATGAACAAAAAGACAGTGGTCACCTGTAGACTT
GTTTTGTTCTTCACTTTCTAATTGACtttgaatgtttgaaaataCGCGAT
GACTCACCCATCCTCTTCTCATGCAAAACAATCATTGCATAATTCCTCAT
TGATAACATttccctttttcttttttagtttcCACACGACTTTCCGTCAT
GCAGTCCACCCAACTACCACCCGAACACGATTTCATACACGCCAAGCCCT
CCCGAATGGTCTTCGCCCATCTTCGAACAAAAACACGCCCCTCATTACAC
ACCTTACACCCAGCACCACCCTTACTATCCAGCTCAGCGCCCATCCATGT
TGATCCCTTATCCACAATATGCAGCATAAGTTTCACCACTCGAATTATTT
GCTGATGGAAATTGCTGGTTTTGAATCAATTGAATGAATCATGTGACGCT
GACCGCCCCTTGGAAACACCCTACAAAGCTGCTACTGGAATCAAGATGGA
CATTGGAATCAACTCAAGACTGAAGAAGACTCAAGACGGTTCTGACGCAA
CCACTGGAATCAATTGGACCCAACTCAAGACTCAAGACTTATCTATGGAC
CCGACTCAAGACTCAAGATTATCGAATGGACCCACTTCAAGACTCAAGAC
CCAATCCCAACCTGTTTAGGTGATCTGGAATCTGCCTAAACAA
Run BLAST on NCBI

transcript from alignment at sc0007348:1..743-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045266 ID=TCONS_00045266|Name=TCONS_00045266|organism=Clytia hemisphaerica|type=transcript|length=743bp|location=Sequence derived from alignment at sc0007348:1..743- (Clytia hemisphaerica)
CTGATTTGATGTTTCAAAAGCGCTTTTTCTTTTTCATAAAAATCTTTAAT
AAACTGATGACATTTTGATGAACAAAAAGACAGTGGTCACCTGTAGACTT
GTTTTGTTCTTCACTTTCTAATTGACTTTGAATGTTTGAAAATACGCGAT
GACTCACCCATCCTCTTCTCATGCAAAACAATCATTGCATAATTCCTCAT
TGATAACATTTCCCTTTTTCTTTTTTAGTTTCCACACGACTTTCCGTCAT
GCAGTCCACCCAACTACCACCCGAACACGATTTCATACACGCCAAGCCCT
CCCGAATGGTCTTCGCCCATCTTCGAACAAAAACACGCCCCTCATTACAC
ACCTTACACCCAGCACCACCCTTACTATCCAGCTCAGCGCCCATCCATGT
TGATCCCTTATCCACAATATGCAGCATAAGTTTCACCACTCGAATTATTT
GCTGATGGAAATTGCTGGTTTTGAATCAATTGAATGAATCATGTGACGCT
GACCGCCCCTTGGAAACACCCTACAAAGCTGCTACTGGAATCAAGATGGA
CATTGGAATCAACTCAAGACTGAAGAAGACTCAAGACGGTTCTGACGCAA
CCACTGGAATCAATTGGACCCAACTCAAGACTCAAGACTTATCTATGGAC
CCGACTCAAGACTCAAGATTATCGAATGGACCCACTTCAAGACTCAAGAC
CCAATCCCAACCTGTTTAGGTGATCTGGAATCTGCCTAAACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028848XLOC_028848Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045266-exon-sc0007348-1575043694:1..743TCONS_00045266-exon-sc0007348-1575043694:1..743Clytia hemisphaericaexon
TCONS_00045266-exon-sc0007348-1510915933:1..743TCONS_00045266-exon-sc0007348-1510915933:1..743Clytia hemisphaericaexon
TCONS_00045266-exon-sc0007348-1491911889:1..743TCONS_00045266-exon-sc0007348-1491911889:1..743Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0007348supercontigsc0007348:1..743 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.129574	0	0	152.303	119.46	3.03766	6.40524	1.77001	4.32035	0	0.787599	0	0.816793	6.71514	4.68415	5.3266	4.54966	0	0	1.71509	0.836563	0	0	0.634848	1.69973	0	1.55558	0	0.976691
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045266 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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