TCONS_00045184 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045184
Unique NameTCONS_00045184
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length176

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045184 ID=TCONS_00045184|Name=TCONS_00045184|organism=Clytia hemisphaerica|type=transcript|length=176bp
TAGGATTGTATATAGTATATCGAAGGAGCTAGAATATTCCAAGATGGCGT
CATGAAAGCACATGCTTCTACTCTTATTTCTGAACataacaaaaacatta
tgtGAGCCACCAAAAAGCACACACCGCCTCTCACCGCCTATATgctcctc
aaaacaaaatgacgGCAACTTAAATG
Run BLAST on NCBI

transcript from alignment at sc0007152:954..1129

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045184 ID=TCONS_00045184|Name=TCONS_00045184|organism=Clytia hemisphaerica|type=transcript|length=176bp|location=Sequence derived from alignment at sc0007152:954..1129 (Clytia hemisphaerica)
CATTTAAGTTGCcgtcattttgttttgaggagcATATAGGCGGTGAGAGG
CGGTGTGTGCTTTTTGGTGGCTCacataatgtttttgttatGTTCAGAAA
TAAGAGTAGAAGCATGTGCTTTCATGACGCCATCTTGGAATATTCTAGCT
CCTTCGATATACTATATACAATCCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028767XLOC_028767Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045184-exon-sc0007152-1491911889:954..1129TCONS_00045184-exon-sc0007152-1491911889:954..1129Clytia hemisphaericaexon
TCONS_00045184-exon-sc0007152-1510915933:954..1129TCONS_00045184-exon-sc0007152-1510915933:954..1129Clytia hemisphaericaexon
TCONS_00045184-exon-sc0007152-1575043694:954..1129TCONS_00045184-exon-sc0007152-1575043694:954..1129Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0007152supercontigsc0007152:954..1129 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045184 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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