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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045176 ID=TCONS_00045176|Name=TCONS_00045176|organism=Clytia hemisphaerica|type=transcript|length=1090bp
gGGCTGTATAGGTTTCAGGAACTCATCTTGTATGACCTACTCCACATCTT
CTTTTGGGCATTGGACAACAATAAAAAAGGAAAGTAGAAAAAAGATATAc
catatcattttttaattcaaagcAATCAGCAGTTTCCTATATAATGATAC
GGCAATGATCTGATATAATGCCAAGAAACAACAGCCCTAATTCTTGAAAT
ATGTAGAATCTATTCTATAGCGGAAGTAAAATAATTCGCCGTATTTAATA
AGTAGATTAAGACCTACTACAAAAACGAGCAAAAACAGACAATTTAATGA
AATATAATAAGCAGCAAAGTCCGAATATAAGCATCTTTCTgatctttttg
taaaaattcaagaaagaaaCAAGATGTTGTTTAAACAGAATATTTCCTAC
TACAGTGGTCTAATGtcagcaaagatggcgcattattttgcttaaACTTT
CGTGGCTTGGGAGATAAAGAGTAGCTATATTTAGTGTTTTATGTTTAAGA
TATCTGTAATTTTCAATATATTCACGTTTAAACccgaaagtttagaaatt
accCACAAATTGGTGAATCTTCAACCCTGCTGGTGTTTTTACGAAAAACG
TTGATGAACGTTTAGTGTGTATTTACTCTCTTAAAAAACTCTTGATTTGC
TTCCATTGGAAGAAAGACTTTTCAAGTGAGAGTGGGTTTAGCCAAATATT
GTGTGGCGACATGCTCAAATTGACTGGGGAAATTTTTAGTCACTAGCACA
AAACATAcctcaaaagttaccttattcttttaagtttgttgttttttttt
agaaaaaaagagctatcctcagttggtattgataccaaaatagggggtgg
gtaccctttttttaaataatatgattcaaaagttggtatccatatcaaaa
tgacagcaaaactttcctaatttttgcccttgtagctagaaaataccccg
gggtacatatcagtctaaacaggtttcaattggatttgttttagctttta
agtataatgactgtaaatgagtaataagtataaatgactttgaagtttgt
ttattttggactttttcgatattttcaagttttatttttg Run BLAST on NCBI transcript from alignment at sc0007138:2..1091 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045176 ID=TCONS_00045176|Name=TCONS_00045176|organism=Clytia hemisphaerica|type=transcript|length=1090bp|location=Sequence derived from alignment at sc0007138:2..1091 (Clytia hemisphaerica)
caaaaataaaacttgaaaatatcgaaaaagtccaaaataaacaaacttca
aagtcatttatacttattactcatttacagtcattatacttaaaagctaa
aacaaatccaattgaaacctgtttagactgatatgtaccccggggtattt
tctagctacaagggcaaaaattaggaaagttttgctgtcattttgatatg
gataccaacttttgaatcatattatttaaaaaaagggtacccacccccta
ttttggtatcaataccaactgaggatagctctttttttctaaaaaaaaac
aacaaacttaaaagaataaggtaacttttgaggTATGTTTTGTGCTAGTG
ACTAAAAATTTCCCCAGTCAATTTGAGCATGTCGCCACACAATATTTGGC
TAAACCCACTCTCACTTGAAAAGTCTTTCTTCCAATGGAAGCAAATCAAG
AGTTTTTTAAGAGAGTAAATACACACTAAACGTTCATCAACGTTTTTCGT
AAAAACACCAGCAGGGTTGAAGATTCACCAATTTGTGggtaatttctaaa
ctttcggGTTTAAACGTGAATATATTGAAAATTACAGATATCTTAAACAT
AAAACACTAAATATAGCTACTCTTTATCTCCCAAGCCACGAAAGTttaag
caaaataatgcgccatctttgctgaCATTAGACCACTGTAGTAGGAAATA
TTCTGTTTAAACAACATCTTGtttctttcttgaatttttacaaaaagatc
AGAAAGATGCTTATATTCGGACTTTGCTGCTTATTATATTTCATTAAATT
GTCTGTTTTTGCTCGTTTTTGTAGTAGGTCTTAATCTACTTATTAAATAC
GGCGAATTATTTTACTTCCGCTATAGAATAGATTCTACATATTTCAAGAA
TTAGGGCTGTTGTTTCTTGGCATTATATCAGATCATTGCCGTATCATTAT
ATAGGAAACTGCTGATTgctttgaattaaaaaatgatatggTATATCTTT
TTTCTACTTTCCTTTTTTATTGTTGTCCAATGCCCAAAAGAAGATGTGGA
GTAGGTCATACAAGATGAGTTCCTGAAACCTATACAGCCc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045176-exon-sc0007138-1491911889:2..1091 | TCONS_00045176-exon-sc0007138-1491911889:2..1091 | Clytia hemisphaerica | exon |
| TCONS_00045176-exon-sc0007138-1510915933:2..1091 | TCONS_00045176-exon-sc0007138-1510915933:2..1091 | Clytia hemisphaerica | exon |
| TCONS_00045176-exon-sc0007138-1575043694:2..1091 | TCONS_00045176-exon-sc0007138-1575043694:2..1091 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0007138 | supercontig | sc0007138:2..1091 . |
Blast
The following BLAST results are available for this feature:
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