|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045068 ID=TCONS_00045068|Name=TCONS_00045068|organism=Clytia hemisphaerica|type=transcript|length=956bp
CTCATACTTTTACGTTAAAGTCCGACCCGACTGGatcaatgaaataaaag
ttcaGAGTTTTCAAAAGCAAAAGAAGAAGAACGCAAGAACGTCTATCGAG
TCTAGTTTGACTGTttgattgaagaaaataaagaaaaggtaTTCGAAGGT
TGAGGATTGCTGATTGTGATATTATATTCTATTATTCAAGATATTCTTTT
TATGATATAGAAGGGAGGAAGACCATGCttataccgacaaaaaaacagac
AATTTCACGAAGAGAAGAATGTATCGGTATTGCGTTTTCGAAGAAAAGAT
CAAAACCAGGGttttaatatttcaatttgggtgcTTCTatcgttcgacaa
tcgaatttcaatcggtcgattgcgttcaatttggttcgactggttcgatt
gtcaattccgttcgattgagatcgtctggctatATGTTGGATTATATAGG
CCCGTTTCATGTTAGCCTGGATATCCAAGCTCAAAATTTAAGAAAAAACA
aaatttacctcaacatacaaagttcttaaattatagagcttggtctccct
agagaatgaaagtgaaaacccatgtttcctagccaacccagggcagcaaa
tcagaaattaataaaaagcagtcttacaagatctaaaactatttaaaaca
tccaaagattacaccaaagtccataaaaaactttgcatgcattatcatga
ccaaccatgttttcttggaaaatgaacttgcctctgttttcttctttttc
atgttttcatgtaatcAATCTCTCGCTCGCTGACCATCGAAGAGTACGGA
CGTGCCTCTAGACGCATGACCTAGGGCAAGAACACACCTACCTATCTTTA
GTGAGTCGAACTTTTTCTGAACTTATTCTTCTTCAACCAACAATGGGTCG
TAGAGGAAGAAAACCAAATAAGAAAAGCTCAACATCCTCTGAAGAAAATG
ATTACG Run BLAST on NCBI transcript from alignment at sc0006825:418..1373 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045068 ID=TCONS_00045068|Name=TCONS_00045068|organism=Clytia hemisphaerica|type=transcript|length=956bp|location=Sequence derived from alignment at sc0006825:418..1373 (Clytia hemisphaerica)
CGTAATCATTTTCTTCAGAGGATGTTGAGCTTTTCTTATTTGGTTTTCTT
CCTCTACGACCCATTGTTGGTTGAAGAAGAATAAGTTCAGAAAAAGTTCG
ACTCACTAAAGATAGGTAGGTGTGTTCTTGCCCTAGGTCATGCGTCTAGA
GGCACGTCCGTACTCTTCGATGGTCAGCGAGCGAGAGATTgattacatga
aaacatgaaaaagaagaaaacagaggcaagttcattttccaagaaaacat
ggttggtcatgataatgcatgcaaagttttttatggactttggtgtaatc
tttggatgttttaaatagttttagatcttgtaagactgctttttattaat
ttctgatttgctgccctgggttggctaggaaacatgggttttcactttca
ttctctagggagaccaagctctataatttaagaactttgtatgttgaggt
aaatttTGTTTTTTCTTAAATTTTGAGCTTGGATATCCAGGCTAACATGA
AACGGGCCTATATAATCCAACATatagccagacgatctcaatcgaacgga
attgacaatcgaaccagtcgaaccaaattgaacgcaatcgaccgattgaa
attcgattgtcgaacgatAGAAgcacccaaattgaaatattaaaaCCCTG
GTTTTGATCTTTTCTTCGAAAACGCAATACCGATACATTCTTCTCTTCGT
GAAATTgtctgtttttttgtcggtataaGCATGGTCTTCCTCCCTTCTAT
ATCATAAAAAGAATATCTTGAATAATAGAATATAATATCACAATCAGCAA
TCCTCAACCTTCGAAtaccttttctttattttcttcaatcaaACAGTCAA
ACTAGACTCGATAGACGTTCTTGCGTTCTTCTTCTTTTGCTTTTGAAAAC
TCtgaacttttatttcattgatCCAGTCGGGTCGGACTTTAACGTAAAAG
TATGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045068-exon-sc0006825-1491911889:418..1373 | TCONS_00045068-exon-sc0006825-1491911889:418..1373 | Clytia hemisphaerica | exon |
| TCONS_00045068-exon-sc0006825-1510915933:418..1373 | TCONS_00045068-exon-sc0006825-1510915933:418..1373 | Clytia hemisphaerica | exon |
| TCONS_00045068-exon-sc0006825-1575043694:418..1373 | TCONS_00045068-exon-sc0006825-1575043694:418..1373 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006825 | supercontig | sc0006825:418..1373 . |
Blast
The following BLAST results are available for this feature:
|
