TCONS_00045059 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045059
Unique NameTCONS_00045059
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length265

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045059 ID=TCONS_00045059|Name=TCONS_00045059|organism=Clytia hemisphaerica|type=transcript|length=265bp
CTTACCATGAATATGAAATAAATAGTCAACGACACGCCACTGATCTCCAG
CACTGGTCTCCACCACATGTCCGAGAATGGTGTATAATAACGATGATCTC
TGGGAATCAAAATACCGAGGATCGTCCAGATCAAGGTATAAAGGAAATTC
AACGCCAACATCTTTGCTGAGCCTCGTTTTCCGAACAGGTTCCATTTGAC
GTGAAGCAAACGTTGGAAAACGGGATGCATGATAATATCAAGTTGATCGT
ATTGGACAATTACCT
Run BLAST on NCBI

transcript from alignment at sc0006799:679..943

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045059 ID=TCONS_00045059|Name=TCONS_00045059|organism=Clytia hemisphaerica|type=transcript|length=265bp|location=Sequence derived from alignment at sc0006799:679..943 (Clytia hemisphaerica)
AGGTAATTGTCCAATACGATCAACTTGATATTATCATGCATCCCGTTTTC
CAACGTTTGCTTCACGTCAAATGGAACCTGTTCGGAAAACGAGGCTCAGC
AAAGATGTTGGCGTTGAATTTCCTTTATACCTTGATCTGGACGATCCTCG
GTATTTTGATTCCCAGAGATCATCGTTATTATACACCATTCTCGGACATG
TGGTGGAGACCAGTGCTGGAGATCAGTGGCGTGTCGTTGACTATTTATTT
CATATTCATGGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028643XLOC_028643Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045059-exon-sc0006799-1491911889:679..943TCONS_00045059-exon-sc0006799-1491911889:679..943Clytia hemisphaericaexon
TCONS_00045059-exon-sc0006799-1510915933:679..943TCONS_00045059-exon-sc0006799-1510915933:679..943Clytia hemisphaericaexon
TCONS_00045059-exon-sc0006799-1575043694:679..943TCONS_00045059-exon-sc0006799-1575043694:679..943Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0006799supercontigsc0006799:679..943 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.21846	1.1882	0	0	0.821584	1.94768	0.783264	0	1.02678	3.17957	0	2.43447	20.7787	9.49035	0.691885	4.34439	3.20144	4.49352	37.8264	36.3052	5.23205	3.05019	0.698534	1.90521	4.57874	2.3351	0	1.90498	1.3524	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045059 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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