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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045006 ID=TCONS_00045006|Name=TCONS_00045006|organism=Clytia hemisphaerica|type=transcript|length=472bp
AGAACCTTTCCGCCCGCCCGACCACCTGCGTGTATTTTTAACGCCCGctg
cgacgcgaacagaacaatttttcggTGACTGTCTTACTTACAATCATGAA
TGCGTTTTAGGCGTCATTTTGCGGCAGCTCATCATCACAAGGAACGGAAG
AATACCATTACGGAGTGCAAGATTATGAAGAGATGGGCTACCATTTTTGT
GACTCCCTTCTTGACCTCTTCGACCCTGATAAGAAAAAGCTACCTAAGAT
ACTGGATGAGATCAAAAAGAAAGTTCAATCTACAATTCTGCGGAAAATGA
TCACTACGGGGAAGAGCATTCCAACCATCTCCACCACAGAACACCCTCCT
TCACTAGATGAGGTGGTTGGTGAACAGTATTTTTCGGACATCGAATCGGA
ATCTTGTGGTTCGGACAGTTCAGCTTCAGATGGTTTACCAATGCAATTGC
TTCACGCTTCCATCCCTGAGGT Run BLAST on NCBI transcript from alignment at sc0006660:146..1252- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045006 ID=TCONS_00045006|Name=TCONS_00045006|organism=Clytia hemisphaerica|type=transcript|length=1107bp|location=Sequence derived from alignment at sc0006660:146..1252- (Clytia hemisphaerica)
AGAACCTTTCCGCCCGCCCGACCACCTGCGTGTATTTTTAACGCCCGCTG
CGACGCGAACAGAACAATTTTTCGGTGACTGTCTTACTTACAATCATGAA
TGCGTTTTAGGCGTCATTTTGCGGCAGCTCATCATCACAAGGAACGGAAG
AATACCATTACGGAGTGCAAGATTATGAAGAGATGGGCTACCATTTTTGT
GACTCCCTTCTTGACCTCTTCGACCCTGATAAGAAAAAGGTAAACAATTA
TTCAGGGATTGGTTGAGAATGTAAACATTACCTCATGCGCTAGGATAAGA
AAAAAGGGTATGGAATTATGCAGGGATTGGTTGAGAATATAAACATTACG
TCATGCGCTAGGATAAGAAAAAGGGTAAAGAATTATGCAGGGATTGGTTG
AGAATATAAACATTACCTCATGCGCTAGGATAAGAAAAAGGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATGCGCTAGGAT
AAGAAAAAGGGTAAAGAATTATGCAGGGATTGGTTGAGAATATAAACATT
ACCTCATGCGCTAGGATAAGAAAAAGGAATTCAGTCATCTTTCATAGAAA
ATACTTCATTTTATTCAGATTGGCTGAGACGCGTAAACATTACTCATACC
TAGGATATCAAGCTCTTTTTAGCATTTTGTTTAGCTGATTGTTTTTGCGA
AAAATGACGCTAAGTAAAAGAGTACTCACTCGAGACATGCGTAGTTCTCT
CCTTGAGACGGTATGAGTAAAGATAGCCTGTTTAAAAAGCCGCTCGTCTA
AGCGATTTAACGTAGGTCTATTTGGGTTTAGTTCATCACACATGGTATAA
AATCGTGTTCGTTCCTTCTTTCAGCTACCTAAGATACTGGATGAGATCAA
AAAGAAAGTTCAATCTACAATTCTGCGGAAAATGATCACTACGGGGAAGA
GCATTCCAACCATCTCCACCACAGAACACCCTCCTTCACTAGATGAGGTG
GTTGGTGAACAGTATTTTTCGGACATCGAATCGGAATCTTGTGGTTCGGA
CAGTTCAGCTTCAGATGGTTTACCAATGCAATTGCTTCACGCTTCCATCC
CTGAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045006-exon-sc0006660-1575043694:1014..1252 | TCONS_00045006-exon-sc0006660-1575043694:1014..1252 | Clytia hemisphaerica | exon |
| TCONS_00045006-exon-sc0006660-1575043694:146..378 | TCONS_00045006-exon-sc0006660-1575043694:146..378 | Clytia hemisphaerica | exon |
| TCONS_00045006-exon-sc0006660-1510915933:1014..1252 | TCONS_00045006-exon-sc0006660-1510915933:1014..1252 | Clytia hemisphaerica | exon |
| TCONS_00045006-exon-sc0006660-1510915933:146..378 | TCONS_00045006-exon-sc0006660-1510915933:146..378 | Clytia hemisphaerica | exon |
| TCONS_00045006-exon-sc0006660-1491911889:1014..1252 | TCONS_00045006-exon-sc0006660-1491911889:1014..1252 | Clytia hemisphaerica | exon |
| TCONS_00045006-exon-sc0006660-1491911889:146..378 | TCONS_00045006-exon-sc0006660-1491911889:146..378 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006660 | supercontig | sc0006660:146..1252 - |
Blast
The following BLAST results are available for this feature:
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