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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044958 ID=TCONS_00044958|Name=TCONS_00044958|organism=Clytia hemisphaerica|type=transcript|length=659bp
TAGGCGTTGGAGGATCTGGTAAACAGAGTTTGACAAGACTCGCTTCTTTT
ATTGCTGGTTATAAAACATTCCAAATCACTATCACAAGGTTTTCAGAAGT
TGGTGGACGCCTTGGATACTCTTTCTTCATGACGGGGATAAGTTCAGATG
TGATTTCGTCGATCTCGTCACACGCAAATAAATTGGATACCTAAAAAACG
TGGTTTGTTAACAGGTAAGGTAAAGATTTCAAATAAGCTGATTCGGTTTG
TTTTCAATGGAGGTGATAAGTATACAGAGCAGGCAGACAaataagctttc
tccagcaaaaaaaaagtgaaattacgATTAAATTTCGAGctgatggatag
gatctagcattttaattgttttcggagcgcgagataaaaaaagtAGGCAG
cgaacgctatttcgcatctctcaaaccagtgaaattgcttgttgtcacgt
gatttctttggtaagAAATCCTatcaaaacttgcttcacttttcaaTAAA
GGCCGTGGATCTAGCCCATCGGGCTATGATAAATCAGTAGTGATAACccg
ggtccacttaaagctttcttaagtactggatggcgcgattgtGTGTGGCC
CGGTAGGCAGCGGTAGGATATAGCAGTTCTCCATTTTGACGTTTCGTTTA
GGTGGACTG Run BLAST on NCBI transcript from alignment at sc0006542:1..1574+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044958 ID=TCONS_00044958|Name=TCONS_00044958|organism=Clytia hemisphaerica|type=transcript|length=1574bp|location=Sequence derived from alignment at sc0006542:1..1574+ (Clytia hemisphaerica)
TAGGCGTTGGAGGATCTGGTAAACAGAGTTTGACAAGACTCGCTTCTTTT
ATTGCTGGTTATAAAACATTCCAAATCACTATCACAAGGTCCGTGAGTTT
CCGGAAGTCTTTACTTCCGATCTTTAAAATATTTCTGAGGAGCTTTTTTC
TCGATTATCGGTGCACGGTGCAGAGTTCTagatcactgacctttatatat
ccctgaaccaagctatatccgccatctttgatcgaaatttcttttgaatt
ggtacctgtaaagaagccattgcagtgttaaaaattaacgtctaacaacg
ctacatcatcaaaggtattcgaggaaaagtagatctagcgctctcgatgc
attcacaccgctattgagtagtgttaccattagggtaccacttttcgaaa
aactccgatcaaaaattttgcttagacgggattgagaaacttggtccagg
ggtatataaaggtcagtgttctAGACTGTTCCTAAGCGCTTAAAAAGAGG
GTAGCCAAACTTACAATGGTGTGGAATACGAAGTCTCCAAGGAAATTGTA
AGGCACGTTGTCGGAATTTCTCACCAACCTATAAAGAAGTGAAGAAAGTC
TTATTGTACGAAAGTCAATTAATTTATCTCTGTAAAAAATGTTATTCGCT
TTAACACGCCAGTTTTCTATTGCCTTGGCAAATTTTTGTGTTGATAAGTT
CAGTATAATGTTTATAATGTTCCTTCAGTTGCGAAAAAAGGGGGAAAAAG
CATAGttcaaaatttcagctgatGCTTAATTTACAGTCCTTATCCCCTgc
tttaacttttattttaattttggaaaaaactaaaaatgcaAACTCAAGTT
CGAAAAATATTTgcaaacataaaaaaaattgctgGCCTCgaactttaata
aaaaaatttgacacctaaactAAGCAATCCTTACCGGCGAGAAACATAGA
ACAACGTGTAAATTGCTTCGAGCTCGGTTgatgaaatattcaaatattta
aAGGTTTTCAGAAGTTGGTGGACGCCTTGGATACTCTTTCTTCATGACGG
GGATAAGTTCAGATGTGATTTCGTCGATCTCGTCACACGCAAATAAATTG
GATACCTAAAAAACGTGGTTTGTTAACAGGTAAGGTAAAGATTTCAAATA
AGCTGATTCGGTTTGTTTTCAATGGAGGTGATAAGTATACAGAGCAGGCA
GACAaataagctttctccagcaaaaaaaaagtgaaattacgATTAAATTT
CGAGctgatggataggatctagcattttaattgttttcggagcgcgagat
aaaaaaagtAGGCAGcgaacgctatttcgcatctctcaaaccagtgaaat
tgcttgttgtcacgtgatttctttggtaagAAATCCTatcaaaacttgct
tcacttttcaaTAAAGGCCGTGGATCTAGCCCATCGGGCTATGATAAATC
AGTAGTGATAACccgggtccacttaaagctttcttaagtactggatggcg
cgattgtGTGTGGCCCGGTAGGCAGCGGTAGGATATAGCAGTTCTCCATT
TTGACGTTTCGTTTAGGTGGACTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044958-exon-sc0006542-1491911889:1..88 | TCONS_00044958-exon-sc0006542-1491911889:1..88 | Clytia hemisphaerica | exon |
| TCONS_00044958-exon-sc0006542-1510915933:1..88 | TCONS_00044958-exon-sc0006542-1510915933:1..88 | Clytia hemisphaerica | exon |
| TCONS_00044958-exon-sc0006542-1575043694:1..88 | TCONS_00044958-exon-sc0006542-1575043694:1..88 | Clytia hemisphaerica | exon |
| TCONS_00044958-exon-sc0006542-1491911889:1004..1574 | TCONS_00044958-exon-sc0006542-1491911889:1004..1574 | Clytia hemisphaerica | exon |
| TCONS_00044958-exon-sc0006542-1510915933:1004..1574 | TCONS_00044958-exon-sc0006542-1510915933:1004..1574 | Clytia hemisphaerica | exon |
| TCONS_00044958-exon-sc0006542-1575043694:1004..1574 | TCONS_00044958-exon-sc0006542-1575043694:1004..1574 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006542 | supercontig | sc0006542:1..1574 + |
Blast
The following BLAST results are available for this feature:
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